RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 SYNE4Q8N205 404 aa9.99□□□□□ -0.81
RBM39-218ENST00000449489 CCDC24Q8N4L8 307 aa9.99□□□□□ -0.81
RBM39-218ENST00000449489 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
RBM39-218ENST00000449489 TBC1D2BQ9UPU7 963 aa9.99□□□□□ -0.81
RBM39-218ENST00000449489 COLQQ9Y215 455 aaPredicted RBP9.99□□□□□ -0.81
RBM39-218ENST00000449489 SNED1Q8TER0 1413 aa9.99□□□□□ -0.81
RBM39-218ENST00000449489 CEP290O15078 2479 aa9.98□□□□□ -0.81
RBM39-218ENST00000449489 NPHP1O15259 732 aa9.98□□□□□ -0.81
RBM39-218ENST00000449489 PLCG2P16885 1265 aa9.98□□□□□ -0.81
RBM39-218ENST00000449489 IL13P35225 146 aa9.98□□□□□ -0.81
RBM39-218ENST00000449489 SCNN1DP51172 638 aa9.98□□□□□ -0.81
RBM39-218ENST00000449489 EIF6P56537 245 aaKnown RBP9.98□□□□□ -0.81
RBM39-218ENST00000449489 NOGQ13253 232 aa9.98□□□□□ -0.81
RBM39-218ENST00000449489 NPM2Q86SE8 214 aaKnown RBP9.98□□□□□ -0.81
RBM39-218ENST00000449489 TTC5Q8N0Z6 440 aa9.98□□□□□ -0.81
RBM39-218ENST00000449489 PGAP2Q9UHJ9 254 aa9.98□□□□□ -0.81
RBM39-218ENST00000449489 CENPFP49454 3210 aa9.97□□□□□ -0.81
RBM39-218ENST00000449489 BCORQ6W2J9 1755 aa9.97□□□□□ -0.81
RBM39-218ENST00000449489 IRX5P78411 483 aaPredicted RBP9.97□□□□□ -0.81
RBM39-218ENST00000449489 FMR1Q06787 632 aaKnown RBP eCLIP9.97□□□□□ -0.81
RBM39-218ENST00000449489 TPTE2Q6XPS3 522 aa9.97□□□□□ -0.81
RBM39-218ENST00000449489 GCC1Q96CN9 775 aa9.97□□□□□ -0.81
RBM39-218ENST00000449489 GPHNQ9NQX3 736 aaPredicted RBP9.97□□□□□ -0.81
RBM39-218ENST00000449489 SAGE1Q9NXZ1 904 aa9.97□□□□□ -0.81
RBM39-218ENST00000449489 ARIH1Q9Y4X5 557 aaPredicted RBP9.97□□□□□ -0.81
RBM39-218ENST00000449489 HEG1Q9ULI3 1381 aa9.97□□□□□ -0.81
RBM39-218ENST00000449489 TRAF5O00463 557 aa9.96□□□□□ -0.82
RBM39-218ENST00000449489 EPS15P42566 896 aa9.96□□□□□ -0.82
RBM39-218ENST00000449489 GRM1Q13255 1194 aa9.96□□□□□ -0.82
RBM39-218ENST00000449489 ZNF790Q6PG37 636 aa9.96□□□□□ -0.82
RBM39-218ENST00000449489 NBPF5PQ86XG9 351 aaPredicted RBP9.96□□□□□ -0.82
RBM39-218ENST00000449489 MICALL2Q8IY33 904 aa9.96□□□□□ -0.82
RBM39-218ENST00000449489 ZC3H15Q8WU90 426 aaKnown RBP9.96□□□□□ -0.82
RBM39-218ENST00000449489 VPS33BQ9H267 617 aa9.96□□□□□ -0.82
RBM39-218ENST00000449489 ADARB2Q9NS39 739 aaKnown RBP9.96□□□□□ -0.82
RBM39-218ENST00000449489 BRCA2P51587 3418 aa9.95□□□□□ -0.82
RBM39-218ENST00000449489 CELF2O95319 508 aaKnown RBP9.95□□□□□ -0.82
RBM39-218ENST00000449489 CIAPIN1Q6FI81 312 aa9.95□□□□□ -0.82
RBM39-218ENST00000449489 SMYD5Q6GMV2 418 aa9.95□□□□□ -0.82
RBM39-218ENST00000449489 DZIP3Q86Y13 1208 aaKnown RBP9.95□□□□□ -0.82
RBM39-218ENST00000449489 PDCD7Q8N8D1 485 aaKnown RBP9.95□□□□□ -0.82
RBM39-218ENST00000449489 TMC2Q8TDI7 906 aa9.95□□□□□ -0.82
RBM39-218ENST00000449489 ZNF496Q96IT1 587 aaPredicted RBP9.95□□□□□ -0.82
RBM39-218ENST00000449489 ZNF652Q9Y2D9 606 aa9.95□□□□□ -0.82
RBM39-218ENST00000449489 GJA3Q9Y6H8 435 aa9.95□□□□□ -0.82
RBM39-218ENST00000449489 CRY2Q49AN0 593 aa9.94□□□□□ -0.82
RBM39-218ENST00000449489 OLFM4Q6UX06 510 aa9.94□□□□□ -0.82
RBM39-218ENST00000449489 BOLA1Q9Y3E2 137 aa9.94□□□□□ -0.82
RBM39-218ENST00000449489 RANBP2P49792 3224 aaKnown RBP9.94□□□□□ -0.82
RBM39-218ENST00000449489 HTTP42858 3142 aa9.94□□□□□ -0.82
RBM39-218ENST00000449489 CDHR2Q9BYE9 1310 aa9.93□□□□□ -0.82
RBM39-218ENST00000449489 A1BGP04217 495 aa9.93□□□□□ -0.82
RBM39-218ENST00000449489 SOX10P56693 466 aa9.93□□□□□ -0.82
RBM39-218ENST00000449489 CAMK2BQ13554 666 aa9.93□□□□□ -0.82
RBM39-218ENST00000449489 MTHFSDQ2M296 383 aaKnown RBP9.93□□□□□ -0.82
RBM39-218ENST00000449489 PPP1R15BQ5SWA1 713 aa9.93□□□□□ -0.82
RBM39-218ENST00000449489 FMNL2Q96PY5 1086 aa9.93□□□□□ -0.82
RBM39-218ENST00000449489 GPRC5DQ9NZD1 345 aa9.93□□□□□ -0.82
RBM39-218ENST00000449489 AKAP11Q9UKA4 1901 aa9.93□□□□□ -0.82
RBM39-218ENST00000449489 COL4A5P29400 1685 aa9.93□□□□□ -0.82
RBM39-218ENST00000449489 HOXA10P31260 410 aaPredicted RBP9.92□□□□□ -0.82
RBM39-218ENST00000449489 CDC37L1Q7L3B6 337 aa9.92□□□□□ -0.82
RBM39-218ENST00000449489 MORC1Q86VD1 984 aa9.92□□□□□ -0.82
RBM39-218ENST00000449489 LARGE2Q8N3Y3 721 aa9.92□□□□□ -0.82
RBM39-218ENST00000449489 NBPF15Q8N660 670 aa9.92□□□□□ -0.82
RBM39-218ENST00000449489 ZNF330Q9Y3S2 320 aaPredicted RBP9.92□□□□□ -0.82
RBM39-218ENST00000449489 SIPA1L3O60292 1781 aaPredicted RBP9.92□□□□□ -0.82
RBM39-218ENST00000449489 KIF7Q2M1P5 1343 aa9.91□□□□□ -0.82
RBM39-218ENST00000449489 TEFQ10587 303 aa9.91□□□□□ -0.82
RBM39-218ENST00000449489 PKN2Q16513 984 aaKnown RBP9.91□□□□□ -0.82
RBM39-218ENST00000449489 CTU1Q7Z7A3 348 aaKnown RBP9.91□□□□□ -0.82
RBM39-218ENST00000449489 CCDC102AQ96A19 550 aa9.91□□□□□ -0.82
RBM39-218ENST00000449489 KIAA0100Q14667 2235 aaKnown RBP9.91□□□□□ -0.82
RBM39-218ENST00000449489 RIC1Q4ADV7 1423 aa9.9□□□□□ -0.82
RBM39-218ENST00000449489 NIM1KQ8IY84 436 aa9.9□□□□□ -0.82
RBM39-218ENST00000449489 IL17REQ8NFR9 667 aa9.9□□□□□ -0.82
RBM39-218ENST00000449489 TMEM121BQ9BXQ6 578 aaPredicted RBP9.9□□□□□ -0.82
RBM39-218ENST00000449489 GLIS2Q9BZE0 524 aaPredicted RBP9.9□□□□□ -0.82
RBM39-218ENST00000449489 NIP7Q9Y221 180 aaKnown RBP eCLIP9.9□□□□□ -0.82
RBM39-218ENST00000449489 TRIOBPQ9H2D6 2365 aa9.9□□□□□ -0.82
RBM39-218ENST00000449489 GNAT3A8MTJ3 354 aa9.89□□□□□ -0.83
RBM39-218ENST00000449489 FAM155AB1AL88 458 aaPredicted RBP9.89□□□□□ -0.83
RBM39-218ENST00000449489 HUNKP57058 714 aa9.89□□□□□ -0.83
RBM39-218ENST00000449489 FOXK1P85037 733 aa9.89□□□□□ -0.83
RBM39-218ENST00000449489 RGMBQ6NW40 437 aa9.89□□□□□ -0.83
RBM39-218ENST00000449489 CRAMP1Q96RY5 1269 aa9.89□□□□□ -0.83
RBM39-218ENST00000449489 ZIC5Q96T25 663 aa9.89□□□□□ -0.83
RBM39-218ENST00000449489 NYXQ9GZU5 481 aa9.89□□□□□ -0.83
RBM39-218ENST00000449489 PANK3Q9H999 370 aa9.89□□□□□ -0.83
RBM39-218ENST00000449489 ZNRF3Q9ULT6 936 aa9.89□□□□□ -0.83
RBM39-218ENST00000449489 CEMIPQ8WUJ3 1361 aa9.88□□□□□ -0.83
RBM39-218ENST00000449489 NPC1L1Q9UHC9 1359 aa9.88□□□□□ -0.83
RBM39-218ENST00000449489 CXCL9Q07325 125 aa9.88□□□□□ -0.83
RBM39-218ENST00000449489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.88□□□□□ -0.83
RBM39-218ENST00000449489 GAS2L2Q8NHY3 880 aa9.88□□□□□ -0.83
RBM39-218ENST00000449489 RTFDC1Q9BY42 306 aaPredicted RBP9.88□□□□□ -0.83
RBM39-218ENST00000449489 RNF186Q9NXI6 227 aa9.88□□□□□ -0.83
RBM39-218ENST00000449489 USP16Q9Y5T5 823 aa9.88□□□□□ -0.83
RBM39-218ENST00000449489 POLR2AP24928 1970 aaKnown RBP9.88□□□□□ -0.83
RBM39-218ENST00000449489 COL6A3P12111 3177 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms