RNA–Protein interactions for RNA: ENST00000449186.2

RPRD1B-202, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-202ENST00000449186 FOXO4P98177 505 aa13.94□□□□□ -0.18
RPRD1B-202ENST00000449186 SF3B3Q15393 1217 aaKnown RBP13.94□□□□□ -0.18
RPRD1B-202ENST00000449186 ZKSCAN2Q63HK3 967 aa13.94□□□□□ -0.18
RPRD1B-202ENST00000449186 ARHGAP27Q6ZUM4 889 aa13.94□□□□□ -0.18
RPRD1B-202ENST00000449186 C7orf43Q8WVR3 580 aa13.94□□□□□ -0.18
RPRD1B-202ENST00000449186 SUCLG2Q96I99 432 aa13.94□□□□□ -0.18
RPRD1B-202ENST00000449186 USP44Q9H0E7 712 aa13.94□□□□□ -0.18
RPRD1B-202ENST00000449186 CTSWP56202 376 aa13.93□□□□□ -0.18
RPRD1B-202ENST00000449186 RASSF7Q02833 373 aa13.93□□□□□ -0.18
RPRD1B-202ENST00000449186 TMEM57Q8N5G2 664 aa13.93□□□□□ -0.18
RPRD1B-202ENST00000449186 TTLL11Q8NHH1 800 aa13.93□□□□□ -0.18
RPRD1B-202ENST00000449186 PANK1Q8TE04 598 aa13.93□□□□□ -0.18
RPRD1B-202ENST00000449186 ARHGAP45Q92619 1136 aa13.93□□□□□ -0.18
RPRD1B-202ENST00000449186 CNKSR1Q969H4 720 aa13.93□□□□□ -0.18
RPRD1B-202ENST00000449186 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
RPRD1B-202ENST00000449186 GREM2Q9H772 168 aa13.93□□□□□ -0.18
RPRD1B-202ENST00000449186 C9orf78Q9NZ63 289 aaPredicted RBP13.93□□□□□ -0.18
RPRD1B-202ENST00000449186 MYH3P11055 1940 aa13.93□□□□□ -0.18
RPRD1B-202ENST00000449186 SPEF2Q9C093 1822 aa13.92□□□□□ -0.18
RPRD1B-202ENST00000449186 FAM161AQ3B820 660 aa13.92□□□□□ -0.18
RPRD1B-202ENST00000449186 C20orf194Q5TEA3 1177 aa13.92□□□□□ -0.18
RPRD1B-202ENST00000449186 CRAMP1Q96RY5 1269 aa13.92□□□□□ -0.18
RPRD1B-202ENST00000449186 MEIS3Q99687 375 aa13.92□□□□□ -0.18
RPRD1B-202ENST00000449186 UTYO14607 1347 aa13.91□□□□□ -0.18
RPRD1B-202ENST00000449186 NFKBIEO00221 500 aa13.91□□□□□ -0.18
RPRD1B-202ENST00000449186 PPEF1O14829 653 aaPredicted RBP13.91□□□□□ -0.18
RPRD1B-202ENST00000449186 IPO8O15397 1037 aaKnown RBP13.91□□□□□ -0.18
RPRD1B-202ENST00000449186 CCT4P50991 539 aaKnown RBP13.91□□□□□ -0.18
RPRD1B-202ENST00000449186 INTS3Q68E01 1043 aaKnown RBP13.91□□□□□ -0.18
RPRD1B-202ENST00000449186 DDX46Q7L014 1031 aaKnown RBP13.91□□□□□ -0.18
RPRD1B-202ENST00000449186 PDZRN3Q9UPQ7 1066 aa13.91□□□□□ -0.18
RPRD1B-202ENST00000449186 LMBR1LQ6UX01 489 aa13.9□□□□□ -0.18
RPRD1B-202ENST00000449186 ANKRD44Q8N8A2 993 aa13.9□□□□□ -0.18
RPRD1B-202ENST00000449186 PLA2G12BQ9BX93 195 aa13.9□□□□□ -0.18
RPRD1B-202ENST00000449186 FER1L6Q2WGJ9 1857 aa13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 DCAF8L1A6NGE4 600 aa13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 WTIPA6NIX2 430 aaPredicted RBP13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 GRIN3BO60391 1043 aa13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 CSF1RP07333 972 aa13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 ALDH1B1P30837 517 aa13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 GRAPQ13588 217 aa13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 CCDC152Q4G0S7 254 aa13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 DZIP1LQ8IYY4 767 aaKnown RBP13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 GRAPLQ8TC17 118 aaPredicted RBP13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 ZNF594Q96JF6 807 aaPredicted RBP13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 BICC1Q9H694 974 aaKnown RBP13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 CHMP3Q9Y3E7 222 aa13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 SNED1Q8TER0 1413 aa13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 CCDC88AQ3V6T2 1871 aa13.89□□□□□ -0.19
RPRD1B-202ENST00000449186 LRRFIP2Q9Y608 721 aaKnown RBP13.88□□□□□ -0.19
RPRD1B-202ENST00000449186 SBF1O95248 1867 aa13.88□□□□□ -0.19
RPRD1B-202ENST00000449186 ITGA6P23229 1130 aa13.87□□□□□ -0.19
RPRD1B-202ENST00000449186 RPS8P62241 208 aaKnown RBP13.87□□□□□ -0.19
RPRD1B-202ENST00000449186 ITPRIPQ8IWB1 547 aa13.87□□□□□ -0.19
RPRD1B-202ENST00000449186 FTSJ3Q8IY81 847 aaKnown RBP13.87□□□□□ -0.19
RPRD1B-202ENST00000449186 KLHDC4Q8TBB5 520 aa13.87□□□□□ -0.19
RPRD1B-202ENST00000449186 GPR101Q96P66 508 aaPredicted RBP13.87□□□□□ -0.19
RPRD1B-202ENST00000449186 C1orf115Q9H7X2 142 aa13.87□□□□□ -0.19
RPRD1B-202ENST00000449186 ATP6V0A2Q9Y487 856 aa13.87□□□□□ -0.19
RPRD1B-202ENST00000449186 BBOX1O75936 387 aa13.86□□□□□ -0.19
RPRD1B-202ENST00000449186 UBTFL1P0CB47 393 aaPredicted RBP13.86□□□□□ -0.19
RPRD1B-202ENST00000449186 ZNF277Q9NRM2 450 aaPredicted RBP13.86□□□□□ -0.19
RPRD1B-202ENST00000449186 COG6Q9Y2V7 657 aa13.86□□□□□ -0.19
RPRD1B-202ENST00000449186 LRRC37AA6NMS7 1700 aa13.86□□□□□ -0.19
RPRD1B-202ENST00000449186 CHD4Q14839 1912 aa13.86□□□□□ -0.19
RPRD1B-202ENST00000449186 COL4A5P29400 1685 aa13.85□□□□□ -0.19
RPRD1B-202ENST00000449186 DUOX1Q9NRD9 1551 aa13.85□□□□□ -0.19
RPRD1B-202ENST00000449186 GPSM2P81274 684 aa13.85□□□□□ -0.19
RPRD1B-202ENST00000449186 CCDC93Q567U6 631 aa13.85□□□□□ -0.19
RPRD1B-202ENST00000449186 SP8Q8IXZ3 490 aa13.85□□□□□ -0.19
RPRD1B-202ENST00000449186 RTL9Q8NET4 1388 aa13.84□□□□□ -0.19
RPRD1B-202ENST00000449186 HSP90B1P14625 803 aaKnown RBP13.84□□□□□ -0.19
RPRD1B-202ENST00000449186 RABL6Q3YEC7 729 aaPredicted RBP13.84□□□□□ -0.19
RPRD1B-202ENST00000449186 C9orf131Q5VYM1 1079 aa13.84□□□□□ -0.19
RPRD1B-202ENST00000449186 ANKRD18AQ8IVF6 992 aa13.84□□□□□ -0.19
RPRD1B-202ENST00000449186 PUS3Q9BZE2 481 aaKnown RBP13.84□□□□□ -0.19
RPRD1B-202ENST00000449186 SNAP23O00161 211 aa13.83□□□□□ -0.2
RPRD1B-202ENST00000449186 ZBTB7BO15156 539 aaPredicted RBP13.83□□□□□ -0.2
RPRD1B-202ENST00000449186 HELBQ8NG08 1087 aaPredicted RBP13.83□□□□□ -0.2
RPRD1B-202ENST00000449186 TAOK3Q9H2K8 898 aa13.83□□□□□ -0.2
RPRD1B-202ENST00000449186 RNF181Q9P0P0 153 aa13.83□□□□□ -0.2
RPRD1B-202ENST00000449186 NSFL1CQ9UNZ2 370 aaKnown RBP13.83□□□□□ -0.2
RPRD1B-202ENST00000449186 LTBP1Q14766 1721 aa13.83□□□□□ -0.2
RPRD1B-202ENST00000449186 ANKRD18BA2A2Z9 1011 aa13.82□□□□□ -0.2
RPRD1B-202ENST00000449186 RFX5P48382 616 aaPredicted RBP13.82□□□□□ -0.2
RPRD1B-202ENST00000449186 RRP1P56182 461 aaKnown RBP13.82□□□□□ -0.2
RPRD1B-202ENST00000449186 FKBP4Q02790 459 aaKnown RBP eCLIP13.82□□□□□ -0.2
RPRD1B-202ENST00000449186 IFIT5Q13325 482 aaKnown RBP13.82□□□□□ -0.2
RPRD1B-202ENST00000449186 CDC5LQ99459 802 aaKnown RBP13.82□□□□□ -0.2
RPRD1B-202ENST00000449186 POLLQ9UGP5 575 aa13.82□□□□□ -0.2
RPRD1B-202ENST00000449186 MINPP1Q9UNW1 487 aa13.82□□□□□ -0.2
RPRD1B-202ENST00000449186 A0A1B0GUL6 1792 aa13.81□□□□□ -0.2
RPRD1B-202ENST00000449186 MVPQ14764 893 aaKnown RBP13.81□□□□□ -0.2
RPRD1B-202ENST00000449186 CCDC57Q2TAC2 916 aa13.81□□□□□ -0.2
RPRD1B-202ENST00000449186 LRRC24Q50LG9 513 aa13.81□□□□□ -0.2
RPRD1B-202ENST00000449186 DPP8Q6V1X1 898 aaPredicted RBP13.81□□□□□ -0.2
RPRD1B-202ENST00000449186 RTKN2Q8IZC4 609 aa13.81□□□□□ -0.2
RPRD1B-202ENST00000449186 MPNDQ8N594 471 aa13.81□□□□□ -0.2
RPRD1B-202ENST00000449186 PA2G4Q9UQ80 394 aaKnown RBP13.81□□□□□ -0.2
RPRD1B-202ENST00000449186 PNMA6EA0A0J9YXQ4 647 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms