RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 LTBP1Q14766 1721 aa20.24■□□□□ 0.83
TRA2A-203ENST00000448549 HOXB7P09629 217 aa20.23■□□□□ 0.83
TRA2A-203ENST00000448549 AIDAQ96BJ3 306 aa20.23■□□□□ 0.83
TRA2A-203ENST00000448549 CFAP44Q96MT7 982 aa20.23■□□□□ 0.83
TRA2A-203ENST00000448549 DBF4Q9UBU7 674 aaPredicted RBP20.23■□□□□ 0.83
TRA2A-203ENST00000448549 ATP5J2-PTCD1G3V325 749 aa20.22■□□□□ 0.83
TRA2A-203ENST00000448549 TRAF5O00463 557 aa20.22■□□□□ 0.83
TRA2A-203ENST00000448549 GMPSP49915 693 aaPredicted RBP20.22■□□□□ 0.83
TRA2A-203ENST00000448549 KIAA2012Q0VF49 1180 aa20.22■□□□□ 0.83
TRA2A-203ENST00000448549 DUSP27Q5VZP5 1158 aa20.22■□□□□ 0.83
TRA2A-203ENST00000448549 FAM89AQ96GI7 184 aa20.22■□□□□ 0.83
TRA2A-203ENST00000448549 ADARB2Q9NS39 739 aaKnown RBP20.22■□□□□ 0.83
TRA2A-203ENST00000448549 WBP1LQ9NX94 342 aa20.22■□□□□ 0.83
TRA2A-203ENST00000448549 CTCFP49711 727 aaPredicted RBP20.21■□□□□ 0.83
TRA2A-203ENST00000448549 CIAPIN1Q6FI81 312 aa20.21■□□□□ 0.83
TRA2A-203ENST00000448549 ISCA1Q9BUE6 129 aa20.21■□□□□ 0.83
TRA2A-203ENST00000448549 MBIPQ9NS73 344 aa20.21■□□□□ 0.83
TRA2A-203ENST00000448549 WDR33Q9C0J8 1336 aaKnown RBP20.21■□□□□ 0.83
TRA2A-203ENST00000448549 RAD17O75943 681 aa20.2■□□□□ 0.82
TRA2A-203ENST00000448549 PRDM10Q9NQV6 1147 aa20.2■□□□□ 0.82
TRA2A-203ENST00000448549 HYPKQ9NX55 129 aa20.2■□□□□ 0.82
TRA2A-203ENST00000448549 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
TRA2A-203ENST00000448549 CST9Q5W186 159 aa20.19■□□□□ 0.82
TRA2A-203ENST00000448549 TMC4Q7Z404 712 aa20.19■□□□□ 0.82
TRA2A-203ENST00000448549 TNIP1Q15025 636 aa20.18■□□□□ 0.82
TRA2A-203ENST00000448549 SF3B3Q15393 1217 aaKnown RBP20.18■□□□□ 0.82
TRA2A-203ENST00000448549 CELF1Q92879 486 aaKnown RBP20.18■□□□□ 0.82
TRA2A-203ENST00000448549 BCL2L13Q9BXK5 485 aa20.18■□□□□ 0.82
TRA2A-203ENST00000448549 PRKRIP1Q9H875 184 aaPredicted RBP20.18■□□□□ 0.82
TRA2A-203ENST00000448549 YDJCA8MPS7 323 aa20.17■□□□□ 0.82
TRA2A-203ENST00000448549 LBX1P52954 281 aa20.17■□□□□ 0.82
TRA2A-203ENST00000448549 PAXIP1Q6ZW49 1069 aaPredicted RBP20.17■□□□□ 0.82
TRA2A-203ENST00000448549 NSFL1CQ9UNZ2 370 aaKnown RBP20.17■□□□□ 0.82
TRA2A-203ENST00000448549 ELL2O00472 640 aaPredicted RBP20.16■□□□□ 0.82
TRA2A-203ENST00000448549 APAF1O14727 1248 aa20.16■□□□□ 0.82
TRA2A-203ENST00000448549 ZNF853P0CG23 659 aa20.16■□□□□ 0.82
TRA2A-203ENST00000448549 MAP2K1Q02750 393 aaPredicted RBP20.16■□□□□ 0.82
TRA2A-203ENST00000448549 GRM1Q13255 1194 aa20.16■□□□□ 0.82
TRA2A-203ENST00000448549 TRIM28Q13263 835 aaKnown RBP20.16■□□□□ 0.82
TRA2A-203ENST00000448549 CAPNS2Q96L46 248 aa20.16■□□□□ 0.82
TRA2A-203ENST00000448549 IRS4O14654 1257 aaPredicted RBP20.15■□□□□ 0.82
TRA2A-203ENST00000448549 HIRAP54198 1017 aaPredicted RBP20.15■□□□□ 0.82
TRA2A-203ENST00000448549 WASHC4Q2M389 1173 aa20.15■□□□□ 0.82
TRA2A-203ENST00000448549 CYP4F22Q6NT55 531 aa20.15■□□□□ 0.82
TRA2A-203ENST00000448549 RIC3Q7Z5B4 369 aa20.15■□□□□ 0.82
TRA2A-203ENST00000448549 GLIS2Q9BZE0 524 aaPredicted RBP20.15■□□□□ 0.82
TRA2A-203ENST00000448549 ANKRD36CQ5JPF3 1778 aa20.15■□□□□ 0.82
TRA2A-203ENST00000448549 CDHR2Q9BYE9 1310 aa20.14■□□□□ 0.81
TRA2A-203ENST00000448549 SHTN1A0MZ66 631 aa20.14■□□□□ 0.81
TRA2A-203ENST00000448549 RIMBP2O15034 1052 aa20.14■□□□□ 0.81
TRA2A-203ENST00000448549 TRPM4Q8TD43 1214 aa20.14■□□□□ 0.81
TRA2A-203ENST00000448549 PHAXQ9H814 394 aaKnown RBP20.14■□□□□ 0.81
TRA2A-203ENST00000448549 IFT57Q9NWB7 429 aa20.14■□□□□ 0.81
TRA2A-203ENST00000448549 PGAP2Q9UHJ9 254 aa20.14■□□□□ 0.81
TRA2A-203ENST00000448549 CNOT7Q9UIV1 285 aaKnown RBP20.14■□□□□ 0.81
TRA2A-203ENST00000448549 TLL2Q9Y6L7 1015 aa20.14■□□□□ 0.81
TRA2A-203ENST00000448549 C6orf229H3BNL8 230 aa20.13■□□□□ 0.81
TRA2A-203ENST00000448549 CELF2O95319 508 aaKnown RBP20.13■□□□□ 0.81
TRA2A-203ENST00000448549 HSPA8P11142 646 aaKnown RBP20.13■□□□□ 0.81
TRA2A-203ENST00000448549 ECE1P42892 770 aa20.13■□□□□ 0.81
TRA2A-203ENST00000448549 GNAI1P63096 354 aa20.13■□□□□ 0.81
TRA2A-203ENST00000448549 GPSM2P81274 684 aa20.13■□□□□ 0.81
TRA2A-203ENST00000448549 GOLGA2Q08379 1002 aa20.13■□□□□ 0.81
TRA2A-203ENST00000448549 GPR101Q96P66 508 aaPredicted RBP20.13■□□□□ 0.81
TRA2A-203ENST00000448549 DBNDD1Q9H9R9 158 aa20.13■□□□□ 0.81
TRA2A-203ENST00000448549 POLLQ9UGP5 575 aa20.13■□□□□ 0.81
TRA2A-203ENST00000448549 ZBTB12Q9Y330 459 aaPredicted RBP20.13■□□□□ 0.81
TRA2A-203ENST00000448549 LAMB2P55268 1798 aa20.13■□□□□ 0.81
TRA2A-203ENST00000448549 DUOX1Q9NRD9 1551 aa20.12■□□□□ 0.81
TRA2A-203ENST00000448549 ZC3H15Q8WU90 426 aaKnown RBP20.12■□□□□ 0.81
TRA2A-203ENST00000448549 H7C1D1 291 aa20.11■□□□□ 0.81
TRA2A-203ENST00000448549 RPS8P62241 208 aaKnown RBP20.11■□□□□ 0.81
TRA2A-203ENST00000448549 CALD1Q05682 793 aaKnown RBP20.11■□□□□ 0.81
TRA2A-203ENST00000448549 MICALL2Q8IY33 904 aa20.11■□□□□ 0.81
TRA2A-203ENST00000448549 ZBTB38Q8NAP3 1195 aaPredicted RBP20.11■□□□□ 0.81
TRA2A-203ENST00000448549 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
TRA2A-203ENST00000448549 MYD88Q99836 296 aa20.11■□□□□ 0.81
TRA2A-203ENST00000448549 PSMD14O00487 310 aa20.1■□□□□ 0.81
TRA2A-203ENST00000448549 DOK7Q18PE1 504 aa20.1■□□□□ 0.81
TRA2A-203ENST00000448549 CDC37L1Q7L3B6 337 aa20.1■□□□□ 0.81
TRA2A-203ENST00000448549 SAPCD2Q86UD0 394 aa20.1■□□□□ 0.81
TRA2A-203ENST00000448549 ZNF408Q9H9D4 720 aa20.1■□□□□ 0.81
TRA2A-203ENST00000448549 SEC31BQ9NQW1 1179 aa20.1■□□□□ 0.81
TRA2A-203ENST00000448549 KCNQ5Q9NR82 932 aa20.1■□□□□ 0.81
TRA2A-203ENST00000448549 AOC2O75106 756 aa20.09■□□□□ 0.81
TRA2A-203ENST00000448549 SAMD7Q7Z3H4 446 aa20.09■□□□□ 0.81
TRA2A-203ENST00000448549 TBC1D16Q8TBP0 767 aa20.09■□□□□ 0.81
TRA2A-203ENST00000448549 DPF2Q92785 391 aa20.09■□□□□ 0.81
TRA2A-203ENST00000448549 COL4A1P02462 1669 aa20.08■□□□□ 0.81
TRA2A-203ENST00000448549 ECE2O60344 883 aa20.08■□□□□ 0.81
TRA2A-203ENST00000448549 JARID2Q92833 1246 aaPredicted RBP20.08■□□□□ 0.81
TRA2A-203ENST00000448549 EYA3Q99504 573 aa20.08■□□□□ 0.81
TRA2A-203ENST00000448549 BEGAINQ9BUH8 593 aa20.08■□□□□ 0.81
TRA2A-203ENST00000448549 DDX60Q8IY21 1712 aaKnown RBP20.07■□□□□ 0.8
TRA2A-203ENST00000448549 HSP90B1P14625 803 aaKnown RBP20.07■□□□□ 0.8
TRA2A-203ENST00000448549 DLK2Q6UY11 383 aa20.07■□□□□ 0.8
TRA2A-203ENST00000448549 USP48Q86UV5 1035 aa20.07■□□□□ 0.8
TRA2A-203ENST00000448549 CCDC191Q8NCU4 936 aa20.07■□□□□ 0.8
TRA2A-203ENST00000448549 TAF1P21675 1872 aa20.07■□□□□ 0.8
TRA2A-203ENST00000448549 LRRC37AA6NMS7 1700 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms