RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 SPDYE3A6NKU9 549 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 METAP2P50579 478 aaKnown RBP eCLIP13.47□□□□□ -0.25
FN1-212ENST00000446046 STX8Q9UNK0 236 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 NIP7Q9Y221 180 aaKnown RBP eCLIP13.47□□□□□ -0.253e-24■□□□□ 11.2
FN1-212ENST00000446046 ATP7AQ04656 1500 aa13.47□□□□□ -0.25
FN1-212ENST00000446046 IARSP41252 1262 aaKnown RBP13.46□□□□□ -0.25
FN1-212ENST00000446046 NAA15Q9BXJ9 866 aaKnown RBP13.46□□□□□ -0.25
FN1-212ENST00000446046 C6orf50Q9HD87 102 aa13.46□□□□□ -0.25
FN1-212ENST00000446046 TAX1BP1Q86VP1 789 aa13.46□□□□□ -0.25
FN1-212ENST00000446046 RBM17Q96I25 401 aaKnown RBP13.46□□□□□ -0.25
FN1-212ENST00000446046 CENPHQ9H3R5 247 aa13.46□□□□□ -0.25
FN1-212ENST00000446046 LIMCH1Q9UPQ0 1083 aa13.46□□□□□ -0.25
FN1-212ENST00000446046 CALML3P27482 149 aa13.46□□□□□ -0.25
FN1-212ENST00000446046 SHANK2Q9UPX8 1470 aa13.46□□□□□ -0.25
FN1-212ENST00000446046 GOLIM4O00461 696 aa13.46□□□□□ -0.25
FN1-212ENST00000446046 CALRP27797 417 aaKnown RBP13.46□□□□□ -0.26
FN1-212ENST00000446046 WTAPQ15007 396 aa13.46□□□□□ -0.26
FN1-212ENST00000446046 DDX11Q96FC9 970 aa13.46□□□□□ -0.26
FN1-212ENST00000446046 STK32BQ9NY57 414 aa13.46□□□□□ -0.26
FN1-212ENST00000446046 FLT4P35916 1363 aa13.46□□□□□ -0.26
FN1-212ENST00000446046 NAA16Q6N069 864 aaPredicted RBP13.46□□□□□ -0.26
FN1-212ENST00000446046 IMPG2Q9BZV3 1241 aa13.46□□□□□ -0.26
FN1-212ENST00000446046 ZSCAN16Q9H4T2 348 aaPredicted RBP13.46□□□□□ -0.26
FN1-212ENST00000446046 GOLGA6L10A0A0M3HER8 536 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 GRM8O00222 908 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 CA8P35219 290 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 ACTN2P35609 894 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 SSH1Q8WYL5 1049 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 ATP10AO60312 1499 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 CALM1P0DP23 149 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 CALM2P0DP24 149 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 CALM3P0DP25 149 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 PICK1Q9NRD5 415 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 TNPO1Q92973 898 aaKnown RBP13.45□□□□□ -0.26
FN1-212ENST00000446046 COMMD10Q9Y6G5 202 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 GSTTP1A0A1W2PQM5 241 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 CCDC183Q5T5S1 534 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 CCDC82Q8N4S0 544 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 TSNARE1Q96NA8 513 aa13.45□□□□□ -0.26
FN1-212ENST00000446046 PLS1Q14651 629 aa13.44□□□□□ -0.26
FN1-212ENST00000446046 TRAPPC3LQ5T215 181 aa13.44□□□□□ -0.26
FN1-212ENST00000446046 ADGRF5Q8IZF2 1346 aa13.44□□□□□ -0.26
FN1-212ENST00000446046 ALS2CR12Q96Q35 445 aa13.44□□□□□ -0.26
FN1-212ENST00000446046 SYNCQ9H7C4 482 aa13.44□□□□□ -0.26
FN1-212ENST00000446046 MAST3O60307 1309 aa13.44□□□□□ -0.26
FN1-212ENST00000446046 SFPQP23246 707 aaKnown RBP eCLIP13.44□□□□□ -0.26
FN1-212ENST00000446046 PAFAH1B1P43034 410 aa13.44□□□□□ -0.26
FN1-212ENST00000446046 PUS7Q96PZ0 661 aaKnown RBP13.44□□□□□ -0.26
FN1-212ENST00000446046 IL15P40933 162 aaPredicted RBP13.44□□□□□ -0.26
FN1-212ENST00000446046 RTL9Q8NET4 1388 aa13.44□□□□□ -0.26
FN1-212ENST00000446046 SIRT1Q96EB6 747 aa13.44□□□□□ -0.26
FN1-212ENST00000446046 EXOC1Q9NV70 894 aa13.44□□□□□ -0.26
FN1-212ENST00000446046 RARSP54136 660 aaKnown RBP13.44□□□□□ -0.26
FN1-212ENST00000446046 MSANTD4Q8NCY6 345 aa13.44□□□□□ -0.26
FN1-212ENST00000446046 PDE6BP35913 854 aa13.43□□□□□ -0.26
FN1-212ENST00000446046 ATP2B3Q16720 1220 aa13.43□□□□□ -0.26
FN1-212ENST00000446046 PRPF40BQ6NWY9 871 aaKnown RBP13.43□□□□□ -0.26
FN1-212ENST00000446046 NPATQ14207 1427 aa13.43□□□□□ -0.26
FN1-212ENST00000446046 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.43□□□□□ -0.26
FN1-212ENST00000446046 PI4KAP2A4QPH2 592 aa13.43□□□□□ -0.26
FN1-212ENST00000446046 YEATS4O95619 227 aa13.43□□□□□ -0.26
FN1-212ENST00000446046 PI4KAP1Q8N8J0 262 aa13.43□□□□□ -0.26
FN1-212ENST00000446046 SUPT20HQ8NEM7 779 aa13.43□□□□□ -0.26
FN1-212ENST00000446046 CCDC8Q9H0W5 538 aaPredicted RBP13.43□□□□□ -0.26
FN1-212ENST00000446046 CEP83Q9Y592 693 aa13.43□□□□□ -0.26
FN1-212ENST00000446046 PPM1EQ8WY54 764 aa13.43□□□□□ -0.26
FN1-212ENST00000446046 YTHDC2Q9H6S0 1430 aaKnown RBP13.43□□□□□ -0.26
FN1-212ENST00000446046 PRKCSHP14314 528 aaPredicted RBP13.43□□□□□ -0.26
FN1-212ENST00000446046 DZIP3Q86Y13 1208 aaKnown RBP13.43□□□□□ -0.26
FN1-212ENST00000446046 DYDC1Q8WWB3 177 aa13.43□□□□□ -0.26
FN1-212ENST00000446046 MTIF2P46199 727 aaKnown RBP13.42□□□□□ -0.26
FN1-212ENST00000446046 KLHL10Q6JEL2 608 aa13.42□□□□□ -0.26
FN1-212ENST00000446046 GOLGA6L9A6NEM1 432 aa13.42□□□□□ -0.26
FN1-212ENST00000446046 EIF6P56537 245 aaKnown RBP13.42□□□□□ -0.26
FN1-212ENST00000446046 CRACR2AQ9BSW2 395 aa13.42□□□□□ -0.26
FN1-212ENST00000446046 PRPHP41219 470 aa13.42□□□□□ -0.26
FN1-212ENST00000446046 NUP88Q99567 741 aaPredicted RBP13.42□□□□□ -0.26
FN1-212ENST00000446046 DCAF5Q96JK2 942 aa13.42□□□□□ -0.26
FN1-212ENST00000446046 TOP1P11387 765 aaKnown RBP13.42□□□□□ -0.26
FN1-212ENST00000446046 CYP7A1P22680 504 aa13.42□□□□□ -0.26
FN1-212ENST00000446046 ACSBG1Q96GR2 724 aa13.42□□□□□ -0.26
FN1-212ENST00000446046 CHRNA2Q15822 529 aa13.42□□□□□ -0.26
FN1-212ENST00000446046 LUZP1Q86V48 1076 aa13.42□□□□□ -0.26
FN1-212ENST00000446046 CCDC117Q8IWD4 279 aaPredicted RBP13.42□□□□□ -0.26
FN1-212ENST00000446046 EHBP1Q8NDI1 1231 aa13.42□□□□□ -0.26
FN1-212ENST00000446046 VAT1LQ9HCJ6 419 aa13.41□□□□□ -0.26
FN1-212ENST00000446046 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.26
FN1-212ENST00000446046 ALDH1L1O75891 902 aa13.41□□□□□ -0.26
FN1-212ENST00000446046 BBXQ8WY36 941 aaPredicted RBP13.41□□□□□ -0.26
FN1-212ENST00000446046 EMILIN1Q9Y6C2 1016 aa13.41□□□□□ -0.26
FN1-212ENST00000446046 CCDC40Q4G0X9 1142 aa13.41□□□□□ -0.26
FN1-212ENST00000446046 GLT8D2Q9H1C3 349 aa13.41□□□□□ -0.26
FN1-212ENST00000446046 MAGEB6P1A0A0J9YX57 407 aa13.41□□□□□ -0.26
FN1-212ENST00000446046 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
FN1-212ENST00000446046 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
FN1-212ENST00000446046 KRT13P13646 458 aa13.41□□□□□ -0.26
FN1-212ENST00000446046 RBM25P49756 843 aaKnown RBP13.41□□□□□ -0.26
FN1-212ENST00000446046 GNA11P29992 359 aa13.41□□□□□ -0.26
FN1-212ENST00000446046 NEK1Q96PY6 1258 aa13.41□□□□□ -0.26
FN1-212ENST00000446046 TMOD4Q9NZQ9 345 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms