RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 C9orf78Q9NZ63 289 aaPredicted RBP15.49■□□□□ 0.07
LTBR-204ENST00000444814 ARFGEF1Q9Y6D6 1849 aa15.49■□□□□ 0.07
LTBR-204ENST00000444814 IGKV5-2P06315 115 aa15.49■□□□□ 0.07
LTBR-204ENST00000444814 GRAPQ13588 217 aa15.49■□□□□ 0.07
LTBR-204ENST00000444814 CWF19L2Q2TBE0 894 aaKnown RBP15.49■□□□□ 0.07
LTBR-204ENST00000444814 RTL5Q5HYW3 569 aaPredicted RBP15.49■□□□□ 0.07
LTBR-204ENST00000444814 GRAPLQ8TC17 118 aaPredicted RBP15.49■□□□□ 0.07
LTBR-204ENST00000444814 TAOK3Q9H2K8 898 aa15.49■□□□□ 0.07
LTBR-204ENST00000444814 BRCA1P38398 1863 aaKnown RBP15.48■□□□□ 0.07
LTBR-204ENST00000444814 LTBP3Q9NS15 1303 aa15.48■□□□□ 0.07
LTBR-204ENST00000444814 ZC3H4Q9UPT8 1303 aaKnown RBP15.48■□□□□ 0.07
LTBR-204ENST00000444814 LMNB1P20700 586 aa15.48■□□□□ 0.07
LTBR-204ENST00000444814 RARSP54136 660 aaKnown RBP15.48■□□□□ 0.07
LTBR-204ENST00000444814 BEND3Q5T5X7 828 aa15.48■□□□□ 0.07
LTBR-204ENST00000444814 UBE3BQ7Z3V4 1068 aa15.48■□□□□ 0.07
LTBR-204ENST00000444814 SUPT20HQ8NEM7 779 aa15.48■□□□□ 0.07
LTBR-204ENST00000444814 ARHGAP45Q92619 1136 aa15.48■□□□□ 0.07
LTBR-204ENST00000444814 F6X3S4 739 aa15.47■□□□□ 0.07
LTBR-204ENST00000444814 H7C1W4 665 aa15.47■□□□□ 0.07
LTBR-204ENST00000444814 CCT4P50991 539 aaKnown RBP15.47■□□□□ 0.07
LTBR-204ENST00000444814 CDC5LQ99459 802 aaKnown RBP15.47■□□□□ 0.07
LTBR-204ENST00000444814 BCL2L13Q9BXK5 485 aa15.47■□□□□ 0.07
LTBR-204ENST00000444814 ZNF219Q9P2Y4 722 aaPredicted RBP15.47■□□□□ 0.07
LTBR-204ENST00000444814 CHD4Q14839 1912 aa15.46■□□□□ 0.07
LTBR-204ENST00000444814 COL11A2P13942 1736 aaPredicted RBP15.46■□□□□ 0.06
LTBR-204ENST00000444814 ABCC4O15439 1325 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 GRM8O00222 908 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 CTSWP56202 376 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 FKBP4Q02790 459 aaKnown RBP eCLIP15.45■□□□□ 0.06
LTBR-204ENST00000444814 PLA2G12BQ9BX93 195 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 RNF181Q9P0P0 153 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 ATP6V0A2Q9Y487 856 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 PLCB2Q00722 1185 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 C9orf131Q5VYM1 1079 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 SP8Q8IXZ3 490 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 SYNE4Q8N205 404 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 VPS33BQ9H267 617 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 NOB1Q9ULX3 412 aaKnown RBP15.45■□□□□ 0.06
LTBR-204ENST00000444814 SRCAPQ6ZRS2 3230 aa15.45■□□□□ 0.06
LTBR-204ENST00000444814 TNRC6CQ9HCJ0 1690 aaKnown RBP15.44■□□□□ 0.06
LTBR-204ENST00000444814 ANKRD18AQ8IVF6 992 aa15.44■□□□□ 0.06
LTBR-204ENST00000444814 C7orf43Q8WVR3 580 aa15.44■□□□□ 0.06
LTBR-204ENST00000444814 PSMD1Q99460 953 aa15.44■□□□□ 0.06
LTBR-204ENST00000444814 MS4A1P11836 297 aa15.43■□□□□ 0.06
LTBR-204ENST00000444814 RPS8P62241 208 aaKnown RBP15.43■□□□□ 0.06
LTBR-204ENST00000444814 C3orf67Q6ZVT6 689 aa15.43■□□□□ 0.06
LTBR-204ENST00000444814 IGHMBP2P38935 993 aaKnown RBP15.42■□□□□ 0.06
LTBR-204ENST00000444814 DPY19L2Q6NUT2 758 aa15.42■□□□□ 0.06
LTBR-204ENST00000444814 RTL9Q8NET4 1388 aa15.42■□□□□ 0.06
LTBR-204ENST00000444814 KDM2BQ8NHM5 1336 aa15.42■□□□□ 0.06
LTBR-204ENST00000444814 LAMB2P55268 1798 aa15.42■□□□□ 0.06
LTBR-204ENST00000444814 ZKSCAN2Q63HK3 967 aa15.41■□□□□ 0.06
LTBR-204ENST00000444814 DPP8Q6V1X1 898 aaPredicted RBP15.41■□□□□ 0.06
LTBR-204ENST00000444814 MPNDQ8N594 471 aa15.41■□□□□ 0.06
LTBR-204ENST00000444814 JDP2Q8WYK2 163 aa15.41■□□□□ 0.06
LTBR-204ENST00000444814 FRAT1Q92837 279 aaPredicted RBP15.41■□□□□ 0.06
LTBR-204ENST00000444814 ANKRD18BA2A2Z9 1011 aa15.41■□□□□ 0.06
LTBR-204ENST00000444814 NFKBIEO00221 500 aa15.41■□□□□ 0.06
LTBR-204ENST00000444814 RASSF7Q02833 373 aa15.41■□□□□ 0.06
LTBR-204ENST00000444814 ATF7IPQ6VMQ6 1270 aa15.41■□□□□ 0.06
LTBR-204ENST00000444814 TTLL11Q8NHH1 800 aa15.41■□□□□ 0.06
LTBR-204ENST00000444814 EYA3Q99504 573 aa15.41■□□□□ 0.06
LTBR-204ENST00000444814 MPHOSPH8Q99549 860 aa15.41■□□□□ 0.06
LTBR-204ENST00000444814 CHMP3Q9Y3E7 222 aa15.41■□□□□ 0.06
LTBR-204ENST00000444814 IFIT5Q13325 482 aaKnown RBP15.4■□□□□ 0.06
LTBR-204ENST00000444814 TAF7LQ5H9L4 462 aa15.4■□□□□ 0.06
LTBR-204ENST00000444814 FTSJ3Q8IY81 847 aaKnown RBP15.4■□□□□ 0.06
LTBR-204ENST00000444814 JARID2Q92833 1246 aaPredicted RBP15.4■□□□□ 0.06
LTBR-204ENST00000444814 SLX4Q8IY92 1834 aa15.39■□□□□ 0.05
LTBR-204ENST00000444814 IARSP41252 1262 aaKnown RBP15.39■□□□□ 0.05
LTBR-204ENST00000444814 CCDC57Q2TAC2 916 aa15.39■□□□□ 0.05
LTBR-204ENST00000444814 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.39■□□□□ 0.05
LTBR-204ENST00000444814 GPBP1L1Q9HC44 474 aaPredicted RBP15.39■□□□□ 0.05
LTBR-204ENST00000444814 UTYO14607 1347 aa15.38■□□□□ 0.05
LTBR-204ENST00000444814 DDX60Q8IY21 1712 aaKnown RBP15.38■□□□□ 0.05
LTBR-204ENST00000444814 UBTFL1P0CB47 393 aaPredicted RBP15.38■□□□□ 0.05
LTBR-204ENST00000444814 CASP7P55210 303 aa15.38■□□□□ 0.05
LTBR-204ENST00000444814 CELF1Q92879 486 aaKnown RBP15.38■□□□□ 0.05
LTBR-204ENST00000444814 ANKIB1Q9P2G1 1089 aa15.38■□□□□ 0.05
LTBR-204ENST00000444814 CSF1RP07333 972 aa15.37■□□□□ 0.05
LTBR-204ENST00000444814 GNAI3P08754 354 aa15.37■□□□□ 0.05
LTBR-204ENST00000444814 ITGA6P23229 1130 aa15.37■□□□□ 0.05
LTBR-204ENST00000444814 NIM1KQ8IY84 436 aa15.37■□□□□ 0.05
LTBR-204ENST00000444814 LARGE2Q8N3Y3 721 aa15.37■□□□□ 0.05
LTBR-204ENST00000444814 ZNF784Q8NCA9 323 aaPredicted RBP15.37■□□□□ 0.05
LTBR-204ENST00000444814 CCDC85AQ96PX6 553 aaPredicted RBP15.37■□□□□ 0.05
LTBR-204ENST00000444814 GREM2Q9H772 168 aa15.37■□□□□ 0.05
LTBR-204ENST00000444814 BSDC1Q9NW68 430 aaPredicted RBP15.37■□□□□ 0.05
LTBR-204ENST00000444814 NSFL1CQ9UNZ2 370 aaKnown RBP15.37■□□□□ 0.05
LTBR-204ENST00000444814 G3V3G9 751 aa15.36■□□□□ 0.05
LTBR-204ENST00000444814 EIF6P56537 245 aaKnown RBP15.36■□□□□ 0.05
LTBR-204ENST00000444814 DCAF8Q5TAQ9 597 aa15.36■□□□□ 0.05
LTBR-204ENST00000444814 RTFDC1Q9BY42 306 aaPredicted RBP15.36■□□□□ 0.05
LTBR-204ENST00000444814 ANKRD2Q9GZV1 360 aa15.36■□□□□ 0.05
LTBR-204ENST00000444814 CHMP4BQ9H444 224 aaKnown RBP15.36■□□□□ 0.05
LTBR-204ENST00000444814 ZNF277Q9NRM2 450 aaPredicted RBP15.36■□□□□ 0.05
LTBR-204ENST00000444814 CACNA1SQ13698 1873 aa15.36■□□□□ 0.05
LTBR-204ENST00000444814 PPIP5K2O43314 1243 aa15.36■□□□□ 0.05
LTBR-204ENST00000444814 BCAR3O75815 825 aa15.36■□□□□ 0.05
LTBR-204ENST00000444814 INTS3Q68E01 1043 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms