RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 SEPT3Q9UH03 358 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 EHHADHQ08426 723 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 CAPN12Q6ZSI9 719 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 IFNL1Q8IU54 200 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 DEPDC4Q8N2C3 294 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 ZNF513Q8N8E2 541 aaPredicted RBP4.85□□□□□ -1.63
UBR3-206ENST00000444475 PCDH10Q9P2E7 1040 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 CHIC2Q9UKJ5 165 aa4.85□□□□□ -1.63
UBR3-206ENST00000444475 ATP5J2-PTCD1G3V325 749 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 BAIAP3O94812 1187 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 FMNL1O95466 1100 aaPredicted RBP4.84□□□□□ -1.63
UBR3-206ENST00000444475 F2P00734 622 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 VARSP26640 1264 aaKnown RBP4.84□□□□□ -1.63
UBR3-206ENST00000444475 NBPF5PQ86XG9 351 aaPredicted RBP4.84□□□□□ -1.63
UBR3-206ENST00000444475 TCEAL8Q8IYN2 117 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 TTC13Q8NBP0 860 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 CRELD1Q96HD1 420 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 ASPSCR1Q9BZE9 553 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 PRDM4Q9UKN5 801 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 NPHP1O15259 732 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 EN1Q05925 392 aaPredicted RBP4.84□□□□□ -1.63
UBR3-206ENST00000444475 WDR45BQ5MNZ6 344 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 MSL1Q68DK7 614 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 CFAP161Q6P656 301 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 C16orf86Q6ZW13 317 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 VPS37DQ86XT2 251 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 HOMER1Q86YM7 354 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 SLF2Q8IX21 1173 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 NDUFAF2Q8N183 169 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 SIX5Q8N196 739 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 FAM129BQ96TA1 746 aa4.84□□□□□ -1.63
UBR3-206ENST00000444475 hCG_1984214I3L0E3 225 aa4.84□□□□□ -1.64
UBR3-206ENST00000444475 KIF3CO14782 793 aa4.84□□□□□ -1.64
UBR3-206ENST00000444475 EIF4G2P78344 907 aaKnown RBP eCLIP4.84□□□□□ -1.64
UBR3-206ENST00000444475 KRT72Q14CN4 511 aa4.84□□□□□ -1.64
UBR3-206ENST00000444475 TSHZ3Q63HK5 1081 aa4.84□□□□□ -1.64
UBR3-206ENST00000444475 CD248Q9HCU0 757 aa4.84□□□□□ -1.64
UBR3-206ENST00000444475 ITGAEP38570 1179 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 RAB27AP51159 221 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 PAK2Q13177 524 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 LARP1Q6PKG0 1096 aaKnown RBP4.83□□□□□ -1.64
UBR3-206ENST00000444475 PLPP6Q8IY26 295 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 SKA1Q96BD8 255 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 PDGFDQ9GZP0 370 aaPredicted RBP4.83□□□□□ -1.64
UBR3-206ENST00000444475 CDH19Q9H159 772 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 TMEM63CQ9P1W3 806 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 GTF2A1LQ9UNN4 478 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 DIAPH1O60610 1272 aaKnown RBP4.83□□□□□ -1.64
UBR3-206ENST00000444475 EPB42P16452 691 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 SERPINB3P29508 390 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 RXRGP48443 463 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 NCOA4Q13772 614 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 HSP90AB3PQ58FF7 597 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 FAM133BQ5BKY9 247 aaKnown RBP4.83□□□□□ -1.64
UBR3-206ENST00000444475 PPHLN1Q8NEY8 458 aaKnown RBP4.83□□□□□ -1.64
UBR3-206ENST00000444475 IL17REQ8NFR9 667 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 GPRASP2Q96D09 838 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 FMNL2Q96PY5 1086 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 C2orf49Q9BVC5 232 aaPredicted RBP4.83□□□□□ -1.64
UBR3-206ENST00000444475 RTFDC1Q9BY42 306 aaPredicted RBP4.83□□□□□ -1.64
UBR3-206ENST00000444475 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.83□□□□□ -1.641e-7■■■■■ 35.4
UBR3-206ENST00000444475 ATICP31939 592 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 ETFBP38117 255 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 PPP4R3AQ6IN85 833 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 IFNL2Q8IZJ0 200 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 PHTF2Q8N3S3 785 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 APPL2Q8NEU8 664 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 HELQQ8TDG4 1101 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 ZNF496Q96IT1 587 aaPredicted RBP4.83□□□□□ -1.64
UBR3-206ENST00000444475 PAWRQ96IZ0 340 aaKnown RBP4.83□□□□□ -1.64
UBR3-206ENST00000444475 SAGE1Q9NXZ1 904 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 ZRANB1Q9UGI0 708 aa4.83□□□□□ -1.64
UBR3-206ENST00000444475 GPR182O15218 404 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 AKAP10O43572 662 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 RHOBTB3O94955 611 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 TRIM27P14373 513 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 NAT1P18440 290 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 PURAQ00577 322 aaKnown RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 TOMM20Q15388 145 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 ZKSCAN8Q15776 578 aaPredicted RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 PPP4R4Q6NUP7 873 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 HDGFL2Q7Z4V5 671 aaPredicted RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 CATIPQ7Z7H3 387 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 DGKHQ86XP1 1220 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 CHCHD4Q8N4Q1 142 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 EMID1Q96A84 441 aaPredicted RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 MPP4Q96JB8 637 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 EYA1Q99502 592 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 C9orf78Q9NZ63 289 aaPredicted RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 FBXO2Q9UK22 296 aaPredicted RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 RABGAP1Q9Y3P9 1069 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 C19orf81C9J6K1 198 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 WASLO00401 505 aaPredicted RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 PRPF3O43395 683 aaKnown RBP4.82□□□□□ -1.64
UBR3-206ENST00000444475 SKIP12755 728 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 NCAM1P13591 858 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 ATF3P18847 181 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 TTC30AQ86WT1 665 aa4.82□□□□□ -1.64
UBR3-206ENST00000444475 DDX42Q86XP3 938 aaKnown RBP eCLIP4.82□□□□□ -1.64
UBR3-206ENST00000444475 TRIM52Q96A61 297 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms