RNA–Protein interactions for RNA: ENST00000442210.2

ARL6IP4-209, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 3

Gene ARL6IP4, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-209	ENST00000442210	NECTIN2	Q92692	538 aa		28.82	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	CAPNS2	Q96L46	248 aa		28.82	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	TCIRG1	Q13488	830 aa		28.81	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	28.81	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	TRMT112	Q9UI30	125 aa	Known RBP	28.81	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	KIAA2012	Q0VF49	1180 aa		28.8	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	DDX46	Q7L014	1031 aa	Known RBP	28.8	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	TLL2	Q9Y6L7	1015 aa		28.8	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	SH3TC1	Q8TE82	1336 aa		28.79	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	GMPS	P49915	693 aa	Predicted RBP	28.79	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	DDX60	Q8IY21	1712 aa	Known RBP	28.79	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	LRRC37A	A6NMS7	1700 aa		28.78	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	CDHR2	Q9BYE9	1310 aa		28.78	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	GRAP	Q13588	217 aa		28.78	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	CIAPIN1	Q6FI81	312 aa		28.78	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	CYP4F22	Q6NT55	531 aa		28.78	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	GRAPL	Q8TC17	118 aa	Predicted RBP	28.78	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	GPR101	Q96P66	508 aa	Predicted RBP	28.78	■■■□□ 2.2
ARL6IP4-209	ENST00000442210	CHL1	O00533	1208 aa		28.76	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	GRM1	Q13255	1194 aa		28.76	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	TNIP1	Q15025	636 aa		28.76	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	BEGAIN	Q9BUH8	593 aa		28.76	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	PGAP2	Q9UHJ9	254 aa		28.76	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	DUOX1	Q9NRD9	1551 aa		28.75	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	KRT24	Q2M2I5	525 aa		28.75	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	TMC4	Q7Z404	712 aa		28.75	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	BCL2L13	Q9BXK5	485 aa		28.75	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	RAD17	O75943	681 aa		28.74	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	NEUROD2	Q15784	382 aa		28.74	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	ZC3H15	Q8WU90	426 aa	Known RBP	28.73	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	CHPF2	Q9P2E5	772 aa		28.73	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	CELF2	O95319	508 aa	Known RBP	28.72	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	MAP2K2	P36507	400 aa		28.72	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	SAPCD2	Q86UD0	394 aa		28.72	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	CCDC146	Q8IYE0	955 aa		28.72	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	ABHD8	Q96I13	439 aa		28.72	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	GLIS2	Q9BZE0	524 aa	Predicted RBP	28.72	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	PLBD2	Q8NHP8	589 aa		28.71	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	LAS1L	Q9Y4W2	734 aa	Known RBP	28.71	■■■□□ 2.19
ARL6IP4-209	ENST00000442210	YDJC	A8MPS7	323 aa		28.7	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	HIRA	P54198	1017 aa	Predicted RBP	28.7	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	TRIM35	Q9UPQ4	493 aa		28.7	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	HOXB7	P09629	217 aa		28.69	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	HDGFL1	Q5TGJ6	251 aa		28.69	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	ANKRD13D	Q6ZTN6	518 aa		28.69	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	ZNF428	Q96B54	188 aa		28.69	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	HHIPL1	Q96JK4	782 aa		28.69	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	CNOT7	Q9UIV1	285 aa	Known RBP	28.69	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	POLR2A	P24928	1970 aa	Known RBP	28.69	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	AOC2	O75106	756 aa		28.68	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	TRPM4	Q8TD43	1214 aa		28.68	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	RUNDC1	Q96C34	613 aa		28.68	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	ISCA1	Q9BUE6	129 aa		28.68	■■■□□ 2.18
ARL6IP4-209	ENST00000442210		H7C1D1	291 aa		28.67	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	WDR43	Q15061	677 aa	Known RBP eCLIP	28.67	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	SF3B3	Q15393	1217 aa	Known RBP	28.67	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	CDC37L1	Q7L3B6	337 aa		28.67	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	DBF4	Q9UBU7	674 aa	Predicted RBP	28.67	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	FAM89A	Q96GI7	184 aa		28.66	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	SHTN1	A0MZ66	631 aa		28.65	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	ANP32C	O43423	234 aa		28.65	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	WASHC4	Q2M389	1173 aa		28.65	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	MICALL2	Q8IY33	904 aa		28.65	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	CELF1	Q92879	486 aa	Known RBP	28.65	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	ZNF408	Q9H9D4	720 aa		28.65	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.65	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	ATP5J2-PTCD1	G3V325	749 aa		28.64	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	DPF2	Q92785	391 aa		28.64	■■■□□ 2.18
ARL6IP4-209	ENST00000442210	CASP8AP2	Q9UKL3	1982 aa		28.63	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	HYPK	Q9NX55	129 aa		28.63	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	ZBTB12	Q9Y330	459 aa	Predicted RBP	28.63	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	COL4A1	P02462	1669 aa		28.63	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	PSMD14	O00487	310 aa		28.62	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	CA12	O43570	354 aa		28.62	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	DBNDD1	Q9H9R9	158 aa		28.62	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	TSKS	Q9UJT2	592 aa		28.62	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	BRPF1	P55201	1214 aa	Predicted RBP	28.61	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	CFAP44	Q96MT7	982 aa		28.61	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	POLL	Q9UGP5	575 aa		28.61	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	C6orf229	H3BNL8	230 aa		28.6	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	RIMBP2	O15034	1052 aa		28.6	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	GPSM2	P81274	684 aa		28.6	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	TRIM28	Q13263	835 aa	Known RBP	28.6	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	USP48	Q86UV5	1035 aa		28.6	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	RTL5	Q5HYW3	569 aa	Predicted RBP	28.59	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	DUSP27	Q5VZP5	1158 aa		28.59	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	SAMD7	Q7Z3H4	446 aa		28.59	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	ADAMTS8	Q9UP79	889 aa		28.59	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	IRS4	O14654	1257 aa	Predicted RBP	28.58	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	RPS12	P25398	132 aa	Known RBP	28.58	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	EYA3	Q99504	573 aa		28.58	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	SCN9A	Q15858	1988 aa		28.58	■■■□□ 2.17
ARL6IP4-209	ENST00000442210	ECE2	O60344	883 aa		28.57	■■■□□ 2.16
ARL6IP4-209	ENST00000442210	RPS8	P62241	208 aa	Known RBP	28.56	■■■□□ 2.16
ARL6IP4-209	ENST00000442210	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	28.56	■■■□□ 2.16
ARL6IP4-209	ENST00000442210	MBIP	Q9NS73	344 aa		28.56	■■■□□ 2.16
ARL6IP4-209	ENST00000442210	RTL9	Q8NET4	1388 aa		28.55	■■■□□ 2.16
ARL6IP4-209	ENST00000442210	CCDC85C	A6NKD9	419 aa		28.55	■■■□□ 2.16
ARL6IP4-209	ENST00000442210	HUNK	P57058	714 aa		28.55	■■■□□ 2.16
ARL6IP4-209	ENST00000442210	NOG	Q13253	232 aa		28.55	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms