RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 FKBP1BP68106 108 aa15.59■□□□□ 0.09
RTN4-211ENST00000438462 TNIP1Q15025 636 aa15.59■□□□□ 0.09
RTN4-211ENST00000438462 AMOTQ4VCS5 1084 aa15.59■□□□□ 0.09
RTN4-211ENST00000438462 MOB2Q70IA6 237 aa15.59■□□□□ 0.09
RTN4-211ENST00000438462 EFCC1Q9HA90 598 aa15.59■□□□□ 0.09
RTN4-211ENST00000438462 GGA3Q9NZ52 723 aa15.59■□□□□ 0.09
RTN4-211ENST00000438462 PRUNE2Q8WUY3 3088 aa15.59■□□□□ 0.09
RTN4-211ENST00000438462 TCERG1O14776 1098 aaKnown RBP15.58■□□□□ 0.08
RTN4-211ENST00000438462 STARD3NLO95772 234 aa15.58■□□□□ 0.08
RTN4-211ENST00000438462 SHISA4Q96DD7 197 aa15.58■□□□□ 0.08
RTN4-211ENST00000438462 HTATIP2Q9BUP3 242 aa15.58■□□□□ 0.08
RTN4-211ENST00000438462 SLC52A2Q9HAB3 445 aa15.58■□□□□ 0.08
RTN4-211ENST00000438462 STAP2Q9UGK3 403 aa15.58■□□□□ 0.08
RTN4-211ENST00000438462 EIF4A2Q14240 407 aaKnown RBP15.57■□□□□ 0.08
RTN4-211ENST00000438462 NBPF11Q86T75 865 aa15.57■□□□□ 0.08
RTN4-211ENST00000438462 PUS7Q96PZ0 661 aaKnown RBP15.57■□□□□ 0.08
RTN4-211ENST00000438462 PPEF1O14829 653 aaPredicted RBP15.56■□□□□ 0.08
RTN4-211ENST00000438462 IL6STP40189 918 aaPredicted RBP15.56■□□□□ 0.08
RTN4-211ENST00000438462 CAP1Q01518 475 aa15.56■□□□□ 0.08
RTN4-211ENST00000438462 ASTN2O75129 1339 aaPredicted RBP15.55■□□□□ 0.08
RTN4-211ENST00000438462 PRAMEF22A3QJZ6 481 aa15.55■□□□□ 0.08
RTN4-211ENST00000438462 FAM177BA6PVY3 158 aa15.55■□□□□ 0.08
RTN4-211ENST00000438462 UBE2Q2LH0YL09 131 aa15.55■□□□□ 0.08
RTN4-211ENST00000438462 ALDH1A1P00352 501 aa15.55■□□□□ 0.08
RTN4-211ENST00000438462 CRY2Q49AN0 593 aa15.55■□□□□ 0.08
RTN4-211ENST00000438462 RBM26Q5T8P6 1007 aaKnown RBP15.55■□□□□ 0.08
RTN4-211ENST00000438462 TPTE2Q6XPS3 522 aa15.55■□□□□ 0.08
RTN4-211ENST00000438462 VPS33BQ9H267 617 aa15.55■□□□□ 0.08
RTN4-211ENST00000438462 PTCH2Q9Y6C5 1203 aa15.55■□□□□ 0.08
RTN4-211ENST00000438462 RIC1Q4ADV7 1423 aa15.54■□□□□ 0.08
RTN4-211ENST00000438462 ABCC12Q96J65 1359 aa15.54■□□□□ 0.08
RTN4-211ENST00000438462 MAP3K12Q12852 859 aa15.54■□□□□ 0.08
RTN4-211ENST00000438462 DZIP3Q86Y13 1208 aaKnown RBP15.54■□□□□ 0.08
RTN4-211ENST00000438462 TTC28Q96AY4 2481 aa15.54■□□□□ 0.08
RTN4-211ENST00000438462 CACNA1AO00555 2505 aa15.53■□□□□ 0.08
RTN4-211ENST00000438462 YDJCA8MPS7 323 aa15.53■□□□□ 0.08
RTN4-211ENST00000438462 NPM2Q86SE8 214 aaKnown RBP15.53■□□□□ 0.08
RTN4-211ENST00000438462 SYMPKQ92797 1274 aaKnown RBP15.53■□□□□ 0.08
RTN4-211ENST00000438462 GUCD1Q96NT3 240 aa15.53■□□□□ 0.08
RTN4-211ENST00000438462 ZNF646O15015 1829 aaPredicted RBP15.52■□□□□ 0.08
RTN4-211ENST00000438462 SYNGAP1Q96PV0 1343 aa15.52■□□□□ 0.08
RTN4-211ENST00000438462 LAMA2P24043 3122 aaKnown RBP15.52■□□□□ 0.08
RTN4-211ENST00000438462 TNFRSF10AO00220 468 aa15.52■□□□□ 0.08
RTN4-211ENST00000438462 KIF4BQ2VIQ3 1234 aa15.52■□□□□ 0.08
RTN4-211ENST00000438462 RPGRQ92834 1020 aaKnown RBP15.52■□□□□ 0.08
RTN4-211ENST00000438462 LRIT3Q3SXY7 679 aa15.51■□□□□ 0.07
RTN4-211ENST00000438462 DPF2Q92785 391 aa15.51■□□□□ 0.07
RTN4-211ENST00000438462 LAMB1P07942 1786 aa15.51■□□□□ 0.07
RTN4-211ENST00000438462 BCAMP50895 628 aa15.5■□□□□ 0.07
RTN4-211ENST00000438462 UBE2Q1Q7Z7E8 422 aa15.5■□□□□ 0.07
RTN4-211ENST00000438462 SUPT20HQ8NEM7 779 aa15.5■□□□□ 0.07
RTN4-211ENST00000438462 SH3TC2Q8TF17 1288 aa15.5■□□□□ 0.07
RTN4-211ENST00000438462 NIP7Q9Y221 180 aaKnown RBP eCLIP15.5■□□□□ 0.07
RTN4-211ENST00000438462 GTF2E1P29083 439 aaPredicted RBP15.49■□□□□ 0.07
RTN4-211ENST00000438462 KIAA2012Q0VF49 1180 aa15.49■□□□□ 0.07
RTN4-211ENST00000438462 IFNL1Q8IU54 200 aa15.49■□□□□ 0.07
RTN4-211ENST00000438462 L3MBTL2Q969R5 705 aa15.49■□□□□ 0.07
RTN4-211ENST00000438462 LGR6Q9HBX8 967 aa15.49■□□□□ 0.07
RTN4-211ENST00000438462 ZNF652Q9Y2D9 606 aa15.49■□□□□ 0.07
RTN4-211ENST00000438462 KIF7Q2M1P5 1343 aa15.48■□□□□ 0.07
RTN4-211ENST00000438462 IRS2Q9Y4H2 1338 aa15.48■□□□□ 0.07
RTN4-211ENST00000438462 PSMD14O00487 310 aa15.48■□□□□ 0.07
RTN4-211ENST00000438462 HOXA10P31260 410 aaPredicted RBP15.48■□□□□ 0.07
RTN4-211ENST00000438462 TNNT2P45379 298 aaPredicted RBP15.48■□□□□ 0.07
RTN4-211ENST00000438462 TTLL12Q14166 644 aaPredicted RBP15.48■□□□□ 0.07
RTN4-211ENST00000438462 CLEC4GQ6UXB4 293 aa15.48■□□□□ 0.07
RTN4-211ENST00000438462 A1BGP04217 495 aa15.47■□□□□ 0.07
RTN4-211ENST00000438462 BMP8BP34820 402 aa15.47■□□□□ 0.07
RTN4-211ENST00000438462 SP3Q02447 781 aa15.47■□□□□ 0.07
RTN4-211ENST00000438462 ANGEL2Q5VTE6 544 aaKnown RBP15.47■□□□□ 0.07
RTN4-211ENST00000438462 AEBP1Q8IUX7 1158 aa15.47■□□□□ 0.07
RTN4-211ENST00000438462 RTFDC1Q9BY42 306 aaPredicted RBP15.47■□□□□ 0.07
RTN4-211ENST00000438462 ALPK3Q96L96 1907 aa15.47■□□□□ 0.07
RTN4-211ENST00000438462 TAF1P21675 1872 aa15.46■□□□□ 0.07
RTN4-211ENST00000438462 ZSWIM8A7E2V4 1837 aa15.46■□□□□ 0.07
RTN4-211ENST00000438462 IGF2BP3O00425 579 aaKnown RBP eCLIP15.46■□□□□ 0.07
RTN4-211ENST00000438462 EVI5O60447 810 aa15.46■□□□□ 0.07
RTN4-211ENST00000438462 CRHR2Q13324 411 aa15.46■□□□□ 0.07
RTN4-211ENST00000438462 GDF15Q99988 308 aa15.46■□□□□ 0.07
RTN4-211ENST00000438462 HEG1Q9ULI3 1381 aa15.46■□□□□ 0.07
RTN4-211ENST00000438462 TCIRG1Q13488 830 aa15.45■□□□□ 0.06
RTN4-211ENST00000438462 NUTM1Q86Y26 1132 aa15.45■□□□□ 0.06
RTN4-211ENST00000438462 TTC5Q8N0Z6 440 aa15.45■□□□□ 0.06
RTN4-211ENST00000438462 TMX4Q9H1E5 349 aaPredicted RBP15.45■□□□□ 0.06
RTN4-211ENST00000438462 POLKQ9UBT6 870 aa15.45■□□□□ 0.06
RTN4-211ENST00000438462 SCAF8Q9UPN6 1271 aaKnown RBP15.45■□□□□ 0.06
RTN4-211ENST00000438462 DUOX1Q9NRD9 1551 aa15.45■□□□□ 0.06
RTN4-211ENST00000438462 DDX60Q8IY21 1712 aaKnown RBP15.44■□□□□ 0.06
RTN4-211ENST00000438462 SPRYD7Q5W111 196 aa15.44■□□□□ 0.06
RTN4-211ENST00000438462 DPP8Q6V1X1 898 aaPredicted RBP15.44■□□□□ 0.06
RTN4-211ENST00000438462 RBM17Q96I25 401 aaKnown RBP15.44■□□□□ 0.06
RTN4-211ENST00000438462 ZNF496Q96IT1 587 aaPredicted RBP15.44■□□□□ 0.06
RTN4-211ENST00000438462 FAM161BQ96MY7 647 aa15.44■□□□□ 0.06
RTN4-211ENST00000438462 CRAMP1Q96RY5 1269 aa15.44■□□□□ 0.06
RTN4-211ENST00000438462 ATP6V0A2Q9Y487 856 aa15.44■□□□□ 0.06
RTN4-211ENST00000438462 MANSC4A6NHS7 340 aaPredicted RBP15.43■□□□□ 0.06
RTN4-211ENST00000438462 RNMTO43148 476 aaKnown RBP15.43■□□□□ 0.06
RTN4-211ENST00000438462 RPS12P25398 132 aaKnown RBP15.43■□□□□ 0.06
RTN4-211ENST00000438462 PIP4K2AP48426 406 aaPredicted RBP15.43■□□□□ 0.06
RTN4-211ENST00000438462 MTFR1Q15390 333 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms