RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 LTN1O94822 1766 aa9.32□□□□□ -0.92
GTF2A1-202ENST00000434192 VEGFBP49765 207 aa9.32□□□□□ -0.92
GTF2A1-202ENST00000434192 PRKRIP1Q9H875 184 aaPredicted RBP9.32□□□□□ -0.92
GTF2A1-202ENST00000434192 RGS17Q9UGC6 210 aaPredicted RBP9.32□□□□□ -0.92
GTF2A1-202ENST00000434192 MAP2P11137 1827 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-202ENST00000434192 OVOS2A0A0J9YW53 1432 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 OVOS2Q6IE36 1432 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 MAN1A2O60476 641 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 CNGB1Q14028 1251 aaPredicted RBP9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 RALBP1Q15311 655 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 ESCO1Q5FWF5 840 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 CC2D1BQ5T0F9 858 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 NGDNQ8NEJ9 315 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 PMFBP1Q8TBY8 1022 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 LRRC59Q96AG4 307 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 ORAI2Q96SN7 254 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 TSEN34Q9BSV6 310 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 NXF1Q9UBU9 619 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 NDUFB9Q9Y6M9 179 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 COL14A1Q05707 1796 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 WNK3Q9BYP7 1800 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 SSH2Q76I76 1423 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 NPHP3Q7Z494 1330 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 TTC21AQ8NDW8 1320 aa9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 MYBBP1AQ9BQG0 1328 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-202ENST00000434192 DDX17Q92841 729 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-202ENST00000434192 AGBL1Q96MI9 1066 aa9.3□□□□□ -0.92
GTF2A1-202ENST00000434192 TNS3Q68CZ2 1445 aa9.3□□□□□ -0.92
GTF2A1-202ENST00000434192 CDK12Q9NYV4 1490 aaPredicted RBP9.29□□□□□ -0.92
GTF2A1-202ENST00000434192 ERVH48-1M5A8F1 160 aa9.29□□□□□ -0.92
GTF2A1-202ENST00000434192 LCE2CQ5TA81 110 aa9.29□□□□□ -0.92
GTF2A1-202ENST00000434192 Q6ZVU0 165 aa9.29□□□□□ -0.92
GTF2A1-202ENST00000434192 RGPD5Q99666 1765 aa9.29□□□□□ -0.92
GTF2A1-202ENST00000434192 CCER2I3L3R5 266 aa9.28□□□□□ -0.92
GTF2A1-202ENST00000434192 MEX3CQ5U5Q3 659 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-202ENST00000434192 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.28□□□□□ -0.92
GTF2A1-202ENST00000434192 ZNF784Q8NCA9 323 aaPredicted RBP9.28□□□□□ -0.92
GTF2A1-202ENST00000434192 TTC21BQ7Z4L5 1316 aa9.28□□□□□ -0.92
GTF2A1-202ENST00000434192 SLIT3O75094 1523 aa9.27□□□□□ -0.93
GTF2A1-202ENST00000434192 ESPNB1AK53 854 aa9.27□□□□□ -0.93
GTF2A1-202ENST00000434192 APBB1O00213 710 aa9.27□□□□□ -0.93
GTF2A1-202ENST00000434192 GPR37L1O60883 481 aa9.27□□□□□ -0.93
GTF2A1-202ENST00000434192 GIGYF1O75420 1035 aaPredicted RBP9.27□□□□□ -0.93
GTF2A1-202ENST00000434192 RELBQ01201 579 aa9.27□□□□□ -0.93
GTF2A1-202ENST00000434192 NR1H3Q13133 447 aa9.27□□□□□ -0.93
GTF2A1-202ENST00000434192 POTEAQ6S8J7 498 aa9.27□□□□□ -0.93
GTF2A1-202ENST00000434192 SLC16A10Q8TF71 515 aa9.27□□□□□ -0.93
GTF2A1-202ENST00000434192 SMG6Q86US8 1419 aaKnown RBP9.27□□□□□ -0.93
GTF2A1-202ENST00000434192 USP31Q70CQ4 1352 aa9.26□□□□□ -0.93
GTF2A1-202ENST00000434192 FIGNL2A6NMB9 653 aa9.26□□□□□ -0.93
GTF2A1-202ENST00000434192 MORC1Q86VD1 984 aa9.26□□□□□ -0.93
GTF2A1-202ENST00000434192 NLRP13Q86W25 1043 aa9.26□□□□□ -0.93
GTF2A1-202ENST00000434192 GGNBP2Q9H3C7 697 aa9.26□□□□□ -0.93
GTF2A1-202ENST00000434192 DNMT3LQ9UJW3 386 aa9.26□□□□□ -0.93
GTF2A1-202ENST00000434192 TBC1D2BQ9UPU7 963 aa9.26□□□□□ -0.93
GTF2A1-202ENST00000434192 NFAT5O94916 1531 aa9.26□□□□□ -0.93
GTF2A1-202ENST00000434192 SBNO1A3KN83 1393 aa9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 PEAK1Q9H792 1746 aa9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 GLI3P10071 1580 aa9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 TTLL8A6PVC2 850 aa9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 FYB1O15117 783 aa9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 ADD1P35611 737 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 PSME1Q06323 249 aa9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 ZNF772Q68DY9 489 aaPredicted RBP9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 NME9Q86XW9 330 aa9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 COG3Q96JB2 828 aa9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 ZNF395Q9H8N7 513 aaPredicted RBP9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 CYLDQ9NQC7 956 aa9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 AFF2P51816 1311 aa9.25□□□□□ -0.93
GTF2A1-202ENST00000434192 FAM208AQ9UK61 1670 aaKnown RBP9.24□□□□□ -0.93
GTF2A1-202ENST00000434192 SPINT1O43278 529 aa9.24□□□□□ -0.93
GTF2A1-202ENST00000434192 FOXO3O43524 673 aa9.24□□□□□ -0.93
GTF2A1-202ENST00000434192 LILRA1O75019 489 aa9.24□□□□□ -0.93
GTF2A1-202ENST00000434192 SEPT12Q8IYM1 358 aa9.24□□□□□ -0.93
GTF2A1-202ENST00000434192 MRS2Q9HD23 443 aa9.24□□□□□ -0.93
GTF2A1-202ENST00000434192 SPATA31A3Q5VYP0 1347 aa9.24□□□□□ -0.93
GTF2A1-202ENST00000434192 ARHGEF10O15013 1369 aa9.24□□□□□ -0.93
GTF2A1-202ENST00000434192 AATKQ6ZMQ8 1374 aa9.24□□□□□ -0.93
GTF2A1-202ENST00000434192 LMO7Q8WWI1 1683 aa9.23□□□□□ -0.93
GTF2A1-202ENST00000434192 COL3A1P02461 1466 aaPredicted RBP9.23□□□□□ -0.93
GTF2A1-202ENST00000434192 SLIT2O94813 1529 aa9.23□□□□□ -0.93
GTF2A1-202ENST00000434192 ABCC6O95255 1503 aa9.23□□□□□ -0.93
GTF2A1-202ENST00000434192 PPP2R1AP30153 589 aa9.23□□□□□ -0.93
GTF2A1-202ENST00000434192 XPCQ01831 940 aaPredicted RBP9.23□□□□□ -0.93
GTF2A1-202ENST00000434192 INSM2Q96T92 566 aaPredicted RBP9.23□□□□□ -0.93
GTF2A1-202ENST00000434192 RGS12O14924 1447 aa9.22□□□□□ -0.93
GTF2A1-202ENST00000434192 ATRNO75882 1429 aa9.22□□□□□ -0.93
GTF2A1-202ENST00000434192 H3BM21 787 aa9.22□□□□□ -0.93
GTF2A1-202ENST00000434192 TNNT2P45379 298 aaPredicted RBP9.22□□□□□ -0.93
GTF2A1-202ENST00000434192 KRT28Q7Z3Y7 464 aa9.22□□□□□ -0.93
GTF2A1-202ENST00000434192 NPAS3Q8IXF0 933 aa9.22□□□□□ -0.93
GTF2A1-202ENST00000434192 ABTB2Q8N961 1025 aa9.22□□□□□ -0.93
GTF2A1-202ENST00000434192 C8orf37Q96NL8 207 aa9.22□□□□□ -0.93
GTF2A1-202ENST00000434192 ZNF330Q9Y3S2 320 aaPredicted RBP9.22□□□□□ -0.93
GTF2A1-202ENST00000434192 RGPD1P0DJD0 1748 aa9.22□□□□□ -0.93
GTF2A1-202ENST00000434192 COL18A1P39060 1754 aa9.22□□□□□ -0.93
GTF2A1-202ENST00000434192 BCL9LQ86UU0 1499 aa9.21□□□□□ -0.93
GTF2A1-202ENST00000434192 THSD7AQ9UPZ6 1657 aa9.21□□□□□ -0.93
GTF2A1-202ENST00000434192 ADH1AP07327 375 aa9.21□□□□□ -0.94
GTF2A1-202ENST00000434192 CTSOP43234 321 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms