RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 CCDC171Q6TFL3 1326 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 SYT1P21579 422 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 CETN1Q12798 172 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 TMEM87AQ8NBN3 555 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 TMX3Q96JJ7 454 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 FAM170AA1A519 330 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 PABPN1LA6NDY0 278 aaKnown RBP13.05□□□□□ -0.32
SEC16A-206ENST00000431893 ZSCAN22P10073 491 aaPredicted RBP13.05□□□□□ -0.32
SEC16A-206ENST00000431893 EEF2P13639 858 aaKnown RBP13.05□□□□□ -0.32
SEC16A-206ENST00000431893 NME9Q86XW9 330 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 PLIN2Q99541 437 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 FAM83GA6ND36 823 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 CLGNO14967 610 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 TTC31Q49AM3 519 aaPredicted RBP13.05□□□□□ -0.32
SEC16A-206ENST00000431893 ANXA1P04083 346 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 STX17P56962 302 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 PLS1Q14651 629 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 NAA25Q14CX7 972 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 CCDC121Q6ZUS5 278 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 DDX46Q7L014 1031 aaKnown RBP13.05□□□□□ -0.32
SEC16A-206ENST00000431893 CHST3Q7LGC8 479 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 EMILIN1Q9Y6C2 1016 aa13.05□□□□□ -0.32
SEC16A-206ENST00000431893 ZBTB16Q05516 673 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 TBC1D5Q92609 795 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 NSRP1Q9H0G5 558 aaKnown RBP13.04□□□□□ -0.32
SEC16A-206ENST00000431893 KCNK9Q9NPC2 374 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 HGSO14964 777 aaPredicted RBP13.04□□□□□ -0.32
SEC16A-206ENST00000431893 MFSD6Q6ZSS7 791 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 HEATR3Q7Z4Q2 680 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 IQSEC3Q9UPP2 1182 aaPredicted RBP13.04□□□□□ -0.32
SEC16A-206ENST00000431893 SBNO2Q9Y2G9 1366 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 KLF18A0A0U1RQI7 1052 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 DNM1Q05193 864 aaKnown RBP13.04□□□□□ -0.32
SEC16A-206ENST00000431893 MRRFQ96E11 262 aaKnown RBP13.04□□□□□ -0.32
SEC16A-206ENST00000431893 PRIMPOLQ96LW4 560 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 DHX58Q96C10 678 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 FAM212AQ96EL1 285 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 GUCA1BQ9UMX6 200 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 GOLGA6L9A6NEM1 432 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 ACTN2P35609 894 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 UBE2Q2Q8WVN8 375 aa13.04□□□□□ -0.32
SEC16A-206ENST00000431893 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
SEC16A-206ENST00000431893 KIAA1107Q9UPP5 1409 aa13.03□□□□□ -0.32
SEC16A-206ENST00000431893 TLDC2A0PJX2 215 aa13.03□□□□□ -0.32
SEC16A-206ENST00000431893 XRCC6P12956 609 aaKnown RBP eCLIP13.03□□□□□ -0.324e-7■□□□□ 8.4
SEC16A-206ENST00000431893 TTC22Q5TAA0 569 aa13.03□□□□□ -0.32
SEC16A-206ENST00000431893 RPGRQ92834 1020 aaKnown RBP13.03□□□□□ -0.32
SEC16A-206ENST00000431893 BRF1Q92994 677 aa13.03□□□□□ -0.32
SEC16A-206ENST00000431893 FEZ1Q99689 392 aa13.03□□□□□ -0.32
SEC16A-206ENST00000431893 GAPVD1Q14C86 1478 aa13.03□□□□□ -0.32
SEC16A-206ENST00000431893 TBCAO75347 108 aaKnown RBP13.03□□□□□ -0.32
SEC16A-206ENST00000431893 SYT10Q6XYQ8 523 aa13.03□□□□□ -0.32
SEC16A-206ENST00000431893 FGD5Q6ZNL6 1462 aa13.03□□□□□ -0.32
SEC16A-206ENST00000431893 LMOD1P29536 600 aaPredicted RBP13.03□□□□□ -0.32
SEC16A-206ENST00000431893 TPD52P55327 224 aaPredicted RBP13.03□□□□□ -0.32
SEC16A-206ENST00000431893 TTF1Q15361 905 aaPredicted RBP13.03□□□□□ -0.32
SEC16A-206ENST00000431893 RAB3IL1Q8TBN0 382 aa13.03□□□□□ -0.32
SEC16A-206ENST00000431893 CTAGE9A4FU28 777 aa13.03□□□□□ -0.32
SEC16A-206ENST00000431893 CCDC129Q6ZRS4 1044 aa13.03□□□□□ -0.32
SEC16A-206ENST00000431893 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.32
SEC16A-206ENST00000431893 CCDC174Q6PII3 467 aa13.02□□□□□ -0.32
SEC16A-206ENST00000431893 GPIHBP1Q8IV16 184 aa13.02□□□□□ -0.32
SEC16A-206ENST00000431893 C6orf229H3BNL8 230 aa13.02□□□□□ -0.32
SEC16A-206ENST00000431893 ZNF569Q5MCW4 686 aa13.02□□□□□ -0.32
SEC16A-206ENST00000431893 RNF41Q9H4P4 317 aaPredicted RBP13.02□□□□□ -0.32
SEC16A-206ENST00000431893 EHMT1Q9H9B1 1298 aa13.02□□□□□ -0.32
SEC16A-206ENST00000431893 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.02□□□□□ -0.321e-9■■■■□ 19.8
SEC16A-206ENST00000431893 F8W031 263 aaPredicted RBP13.02□□□□□ -0.33
SEC16A-206ENST00000431893 PPP1R9BQ96SB3 815 aa13.02□□□□□ -0.33
SEC16A-206ENST00000431893 ALG1Q9BT22 464 aa13.02□□□□□ -0.33
SEC16A-206ENST00000431893 DACT1Q9NYF0 836 aa13.02□□□□□ -0.33
SEC16A-206ENST00000431893 PDIA4P13667 645 aaKnown RBP13.02□□□□□ -0.33
SEC16A-206ENST00000431893 CFAP57Q96MR6 1250 aa13.02□□□□□ -0.33
SEC16A-206ENST00000431893 SPAG5Q96R06 1193 aa13.02□□□□□ -0.33
SEC16A-206ENST00000431893 SSX2IPQ9Y2D8 614 aa13.02□□□□□ -0.33
SEC16A-206ENST00000431893 ZWINTO95229 277 aa13.02□□□□□ -0.33
SEC16A-206ENST00000431893 KLHL40Q2TBA0 621 aa13.02□□□□□ -0.33
SEC16A-206ENST00000431893 Q6ZUG5 572 aa13.02□□□□□ -0.33
SEC16A-206ENST00000431893 NCOA7Q8NI08 942 aa13.02□□□□□ -0.33
SEC16A-206ENST00000431893 GOLGA1Q92805 767 aa13.02□□□□□ -0.33
SEC16A-206ENST00000431893 UVSSAQ2YD98 709 aa13.01□□□□□ -0.33
SEC16A-206ENST00000431893 SEC62Q99442 399 aaKnown RBP13.01□□□□□ -0.33
SEC16A-206ENST00000431893 ZNF652Q9Y2D9 606 aa13.01□□□□□ -0.33
SEC16A-206ENST00000431893 KRBA2Q6ZNG9 492 aa13.01□□□□□ -0.33
SEC16A-206ENST00000431893 IVLP07476 585 aa13.01□□□□□ -0.33
SEC16A-206ENST00000431893 C16orf71Q8IYS4 520 aaPredicted RBP13.01□□□□□ -0.33
SEC16A-206ENST00000431893 UBLCP1Q8WVY7 318 aaPredicted RBP13.01□□□□□ -0.33
SEC16A-206ENST00000431893 SELENOOQ9BVL4 669 aa13.01□□□□□ -0.33
SEC16A-206ENST00000431893 RASAL2Q9UJF2 1139 aa13.01□□□□□ -0.33
SEC16A-206ENST00000431893 C9orf84Q5VXU9 1444 aa13.01□□□□□ -0.33
SEC16A-206ENST00000431893 ERCC5P28715 1186 aaPredicted RBP13.01□□□□□ -0.33
SEC16A-206ENST00000431893 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
SEC16A-206ENST00000431893 STAC3Q96MF2 364 aa13.01□□□□□ -0.33
SEC16A-206ENST00000431893 CYLC1P35663 651 aaPredicted RBP13.01□□□□□ -0.33
SEC16A-206ENST00000431893 IFI16Q16666 785 aaKnown RBP13.01□□□□□ -0.33
SEC16A-206ENST00000431893 ANKS4BQ8N8V4 417 aa13.01□□□□□ -0.33
SEC16A-206ENST00000431893 RNASE9P60153 205 aaKnown RBP13□□□□□ -0.33
SEC16A-206ENST00000431893 UAP1Q16222 522 aaPredicted RBP13□□□□□ -0.33
SEC16A-206ENST00000431893 ALDH1L2Q3SY69 923 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms