RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 SYNE4Q8N205 404 aa19.53■□□□□ 0.72
PTCD1-204ENST00000430982 PLBD2Q8NHP8 589 aa19.53■□□□□ 0.72
PTCD1-204ENST00000430982 CAPNS2Q96L46 248 aa19.53■□□□□ 0.72
PTCD1-204ENST00000430982 NYXQ9GZU5 481 aa19.53■□□□□ 0.72
PTCD1-204ENST00000430982 ECE1P42892 770 aa19.52■□□□□ 0.72
PTCD1-204ENST00000430982 SCNN1DP51172 638 aa19.52■□□□□ 0.72
PTCD1-204ENST00000430982 CRY2Q49AN0 593 aa19.52■□□□□ 0.72
PTCD1-204ENST00000430982 PARP10Q53GL7 1025 aa19.52■□□□□ 0.72
PTCD1-204ENST00000430982 NUTM1Q86Y26 1132 aa19.52■□□□□ 0.72
PTCD1-204ENST00000430982 ALDH1B1P30837 517 aa19.51■□□□□ 0.71
PTCD1-204ENST00000430982 TCIRG1Q13488 830 aa19.51■□□□□ 0.71
PTCD1-204ENST00000430982 CST9Q5W186 159 aa19.51■□□□□ 0.71
PTCD1-204ENST00000430982 PPP1R42Q7Z4L9 355 aa19.51■□□□□ 0.71
PTCD1-204ENST00000430982 RIC3Q7Z5B4 369 aa19.51■□□□□ 0.71
PTCD1-204ENST00000430982 RIC1Q4ADV7 1423 aa19.51■□□□□ 0.71
PTCD1-204ENST00000430982 TNRC18O15417 2968 aaPredicted RBP19.5■□□□□ 0.71
PTCD1-204ENST00000430982 E9PSI1 815 aa19.5■□□□□ 0.71
PTCD1-204ENST00000430982 VAMP4O75379 141 aa19.5■□□□□ 0.71
PTCD1-204ENST00000430982 FMR1Q06787 632 aaKnown RBP eCLIP19.5■□□□□ 0.712e-11■■■■■ 40.2
PTCD1-204ENST00000430982 TLL2Q9Y6L7 1015 aa19.5■□□□□ 0.71
PTCD1-204ENST00000430982 NUP98P52948 1817 aa19.5■□□□□ 0.71
PTCD1-204ENST00000430982 NTSR2O95665 410 aa19.49■□□□□ 0.71
PTCD1-204ENST00000430982 CYP4F22Q6NT55 531 aa19.49■□□□□ 0.71
PTCD1-204ENST00000430982 GPR101Q96P66 508 aaPredicted RBP19.49■□□□□ 0.71
PTCD1-204ENST00000430982 UTP14AQ9BVJ6 771 aaKnown RBP19.49■□□□□ 0.71
PTCD1-204ENST00000430982 ABCC12Q96J65 1359 aa19.48■□□□□ 0.71
PTCD1-204ENST00000430982 IBTKQ9P2D0 1353 aaPredicted RBP19.48■□□□□ 0.71
PTCD1-204ENST00000430982 CCDC85CA6NKD9 419 aa19.48■□□□□ 0.71
PTCD1-204ENST00000430982 DDX58O95786 925 aaKnown RBP19.48■□□□□ 0.71
PTCD1-204ENST00000430982 SLC4A2P04920 1241 aa19.48■□□□□ 0.71
PTCD1-204ENST00000430982 MAP2K2P36507 400 aa19.48■□□□□ 0.71
PTCD1-204ENST00000430982 CC2D2BQ6DHV5 1058 aa19.48■□□□□ 0.71
PTCD1-204ENST00000430982 NLRP10Q86W26 655 aa19.48■□□□□ 0.71
PTCD1-204ENST00000430982 JDP2Q8WYK2 163 aa19.48■□□□□ 0.71
PTCD1-204ENST00000430982 ZNF428Q96B54 188 aa19.48■□□□□ 0.71
PTCD1-204ENST00000430982 ATP5J2-PTCD1G3V325 749 aa19.47■□□□□ 0.71
PTCD1-204ENST00000430982 EPS15P42566 896 aa19.47■□□□□ 0.71
PTCD1-204ENST00000430982 SLFN5Q08AF3 891 aa19.47■□□□□ 0.71
PTCD1-204ENST00000430982 USP50Q70EL3 339 aaPredicted RBP19.47■□□□□ 0.71
PTCD1-204ENST00000430982 BEGAINQ9BUH8 593 aa19.47■□□□□ 0.71
PTCD1-204ENST00000430982 LMOD1P29536 600 aaPredicted RBP19.46■□□□□ 0.71
PTCD1-204ENST00000430982 EIF6P56537 245 aaKnown RBP19.46■□□□□ 0.71
PTCD1-204ENST00000430982 G2E3Q7L622 706 aa19.46■□□□□ 0.71
PTCD1-204ENST00000430982 CDCA7LQ96GN5 454 aa19.46■□□□□ 0.71
PTCD1-204ENST00000430982 ISCA1Q9BUE6 129 aa19.46■□□□□ 0.71
PTCD1-204ENST00000430982 TRAF5O00463 557 aa19.45■□□□□ 0.7
PTCD1-204ENST00000430982 CA12O43570 354 aa19.45■□□□□ 0.7
PTCD1-204ENST00000430982 HOXA10P31260 410 aaPredicted RBP19.45■□□□□ 0.7
PTCD1-204ENST00000430982 HHIPL1Q96JK4 782 aa19.45■□□□□ 0.7
PTCD1-204ENST00000430982 MYD88Q99836 296 aa19.45■□□□□ 0.7
PTCD1-204ENST00000430982 TRMT112Q9UI30 125 aaKnown RBP19.45■□□□□ 0.7
PTCD1-204ENST00000430982 GRIPAP1Q4V328 841 aa19.44■□□□□ 0.7
PTCD1-204ENST00000430982 SAPCD2Q86UD0 394 aa19.44■□□□□ 0.7
PTCD1-204ENST00000430982 MAP3K2Q9Y2U5 619 aa19.44■□□□□ 0.7
PTCD1-204ENST00000430982 GJA3Q9Y6H8 435 aa19.44■□□□□ 0.7
PTCD1-204ENST00000430982 PI4KAP2A4QPH2 592 aa19.43■□□□□ 0.7
PTCD1-204ENST00000430982 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTCD1-204ENST00000430982 FLIIQ13045 1269 aa19.43■□□□□ 0.7
PTCD1-204ENST00000430982 KSR2Q6VAB6 950 aa19.43■□□□□ 0.7
PTCD1-204ENST00000430982 PI4KAP1Q8N8J0 262 aa19.43■□□□□ 0.7
PTCD1-204ENST00000430982 MCOLN1Q9GZU1 580 aa19.43■□□□□ 0.7
PTCD1-204ENST00000430982 SH3TC1Q8TE82 1336 aa19.43■□□□□ 0.7
PTCD1-204ENST00000430982 AOC2O75106 756 aa19.42■□□□□ 0.7
PTCD1-204ENST00000430982 PAXIP1Q6ZW49 1069 aaPredicted RBP19.42■□□□□ 0.7
PTCD1-204ENST00000430982 METTL22Q9BUU2 404 aaPredicted RBP19.42■□□□□ 0.7
PTCD1-204ENST00000430982 TSKSQ9UJT2 592 aa19.42■□□□□ 0.7
PTCD1-204ENST00000430982 HCLS1P14317 486 aaPredicted RBP19.41■□□□□ 0.7
PTCD1-204ENST00000430982 BRPF1P55201 1214 aaPredicted RBP19.41■□□□□ 0.7
PTCD1-204ENST00000430982 TRIM28Q13263 835 aaKnown RBP19.41■□□□□ 0.7
PTCD1-204ENST00000430982 FKBP5Q13451 457 aaPredicted RBP19.41■□□□□ 0.7
PTCD1-204ENST00000430982 RPGRQ92834 1020 aaKnown RBP19.41■□□□□ 0.7
PTCD1-204ENST00000430982 NLRP3Q96P20 1036 aa19.41■□□□□ 0.7
PTCD1-204ENST00000430982 ANKRD36CQ5JPF3 1778 aa19.4■□□□□ 0.7
PTCD1-204ENST00000430982 RTL5Q5HYW3 569 aaPredicted RBP19.4■□□□□ 0.7
PTCD1-204ENST00000430982 SLC10A5Q5PT55 438 aa19.4■□□□□ 0.7
PTCD1-204ENST00000430982 C3orf67Q6ZVT6 689 aa19.4■□□□□ 0.7
PTCD1-204ENST00000430982 SLC51AQ86UW1 340 aa19.4■□□□□ 0.7
PTCD1-204ENST00000430982 LARGE2Q8N3Y3 721 aa19.4■□□□□ 0.7
PTCD1-204ENST00000430982 ADARB2Q9NS39 739 aaKnown RBP19.4■□□□□ 0.7
PTCD1-204ENST00000430982 GPRC5DQ9NZD1 345 aa19.4■□□□□ 0.7
PTCD1-204ENST00000430982 PGAP2Q9UHJ9 254 aa19.4■□□□□ 0.7
PTCD1-204ENST00000430982 CASP8AP2Q9UKL3 1982 aa19.4■□□□□ 0.7
PTCD1-204ENST00000430982 NEXNQ0ZGT2 675 aa19.39■□□□□ 0.69
PTCD1-204ENST00000430982 GRM1Q13255 1194 aa19.39■□□□□ 0.69
PTCD1-204ENST00000430982 FAM89AQ96GI7 184 aa19.39■□□□□ 0.69
PTCD1-204ENST00000430982 PDE4DIPQ5VU43 2346 aa19.39■□□□□ 0.69
PTCD1-204ENST00000430982 TRMT2AQ8IZ69 625 aaKnown RBP19.38■□□□□ 0.69
PTCD1-204ENST00000430982 CCDC191Q8NCU4 936 aa19.38■□□□□ 0.69
PTCD1-204ENST00000430982 RBM17Q96I25 401 aaKnown RBP19.38■□□□□ 0.69
PTCD1-204ENST00000430982 CRAMP1Q96RY5 1269 aa19.38■□□□□ 0.69
PTCD1-204ENST00000430982 VPS33BQ9H267 617 aa19.38■□□□□ 0.69
PTCD1-204ENST00000430982 CWC25Q9NXE8 425 aaPredicted RBP19.38■□□□□ 0.69
PTCD1-204ENST00000430982 DNAAF4Q8WXU2 420 aa19.37■□□□□ 0.69
PTCD1-204ENST00000430982 CDHR2Q9BYE9 1310 aa19.36■□□□□ 0.69
PTCD1-204ENST00000430982 CELF2O95319 508 aaKnown RBP19.36■□□□□ 0.69
PTCD1-204ENST00000430982 IGKV5-2P06315 115 aa19.36■□□□□ 0.69
PTCD1-204ENST00000430982 NIM1KQ8IY84 436 aa19.36■□□□□ 0.69
PTCD1-204ENST00000430982 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
PTCD1-204ENST00000430982 IRS4O14654 1257 aaPredicted RBP19.35■□□□□ 0.69
PTCD1-204ENST00000430982 PPEF1O14829 653 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms