RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 CWF19L2Q2TBE0 894 aaKnown RBP12.52□□□□□ -0.41
HDAC6-207ENST00000430858 C16orf71Q8IYS4 520 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-207ENST00000430858 SUPT20HQ8NEM7 779 aa12.52□□□□□ -0.41
HDAC6-207ENST00000430858 LINS1Q8NG48 757 aa12.52□□□□□ -0.41
HDAC6-207ENST00000430858 VPS33BQ9H267 617 aa12.52□□□□□ -0.41
HDAC6-207ENST00000430858 VEGFAP15692 232 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-207ENST00000430858 GCKRQ14397 625 aa12.51□□□□□ -0.41
HDAC6-207ENST00000430858 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
HDAC6-207ENST00000430858 MPNDQ8N594 471 aa12.51□□□□□ -0.41
HDAC6-207ENST00000430858 JDP2Q8WYK2 163 aa12.51□□□□□ -0.41
HDAC6-207ENST00000430858 RTFDC1Q9BY42 306 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-207ENST00000430858 TIAM2Q8IVF5 1701 aa12.51□□□□□ -0.41
HDAC6-207ENST00000430858 H7C1W4 665 aa12.5□□□□□ -0.41
HDAC6-207ENST00000430858 FZD9O00144 591 aa12.5□□□□□ -0.41
HDAC6-207ENST00000430858 RPS8P62241 208 aaKnown RBP12.5□□□□□ -0.41
HDAC6-207ENST00000430858 DPP8Q6V1X1 898 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-207ENST00000430858 SLC51AQ86UW1 340 aa12.5□□□□□ -0.41
HDAC6-207ENST00000430858 TRMT2AQ8IZ69 625 aaKnown RBP12.5□□□□□ -0.41
HDAC6-207ENST00000430858 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
HDAC6-207ENST00000430858 RBM46Q8TBY0 533 aaKnown RBP12.5□□□□□ -0.41
HDAC6-207ENST00000430858 JARID2Q92833 1246 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-207ENST00000430858 CELF1Q92879 486 aaKnown RBP12.5□□□□□ -0.41
HDAC6-207ENST00000430858 CDCA7LQ96GN5 454 aa12.5□□□□□ -0.41
HDAC6-207ENST00000430858 DDX60Q8IY21 1712 aaKnown RBP12.5□□□□□ -0.41
HDAC6-207ENST00000430858 DICER1Q9UPY3 1922 aaKnown RBP12.49□□□□□ -0.41
HDAC6-207ENST00000430858 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
HDAC6-207ENST00000430858 LAMB2P55268 1798 aa12.49□□□□□ -0.41
HDAC6-207ENST00000430858 DDNO94850 711 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-207ENST00000430858 CTSWP56202 376 aa12.49□□□□□ -0.41
HDAC6-207ENST00000430858 CACNA1FO60840 1977 aa12.49□□□□□ -0.41
HDAC6-207ENST00000430858 ZNF541Q9H0D2 1346 aa12.48□□□□□ -0.41
HDAC6-207ENST00000430858 F6X3S4 739 aa12.48□□□□□ -0.41
HDAC6-207ENST00000430858 PPIP5K2O43314 1243 aa12.48□□□□□ -0.41
HDAC6-207ENST00000430858 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-207ENST00000430858 EIF6P56537 245 aaKnown RBP12.48□□□□□ -0.41
HDAC6-207ENST00000430858 BEND3Q5T5X7 828 aa12.48□□□□□ -0.41
HDAC6-207ENST00000430858 UBE3BQ7Z3V4 1068 aa12.48□□□□□ -0.41
HDAC6-207ENST00000430858 NIM1KQ8IY84 436 aa12.48□□□□□ -0.41
HDAC6-207ENST00000430858 MRPL50Q8N5N7 158 aaKnown RBP12.48□□□□□ -0.41
HDAC6-207ENST00000430858 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-207ENST00000430858 PLA2G12BQ9BX93 195 aa12.48□□□□□ -0.41
HDAC6-207ENST00000430858 SEC31BQ9NQW1 1179 aa12.48□□□□□ -0.41
HDAC6-207ENST00000430858 IQCA1LA6NCM1 817 aa12.47□□□□□ -0.41
HDAC6-207ENST00000430858 POTECB2RU33 542 aa12.47□□□□□ -0.41
HDAC6-207ENST00000430858 CASP7P55210 303 aa12.47□□□□□ -0.41
HDAC6-207ENST00000430858 FSTL1Q12841 308 aa12.47□□□□□ -0.41
HDAC6-207ENST00000430858 AOC3Q16853 763 aa12.47□□□□□ -0.41
HDAC6-207ENST00000430858 ALDH1L2Q3SY69 923 aa12.47□□□□□ -0.41
HDAC6-207ENST00000430858 ANKRD18AQ8IVF6 992 aa12.47□□□□□ -0.41
HDAC6-207ENST00000430858 TTLL11Q8NHH1 800 aa12.47□□□□□ -0.41
HDAC6-207ENST00000430858 CCDC85AQ96PX6 553 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-207ENST00000430858 CDC5LQ99459 802 aaKnown RBP12.47□□□□□ -0.41
HDAC6-207ENST00000430858 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
HDAC6-207ENST00000430858 WDR90Q96KV7 1748 aa12.46□□□□□ -0.41
HDAC6-207ENST00000430858 PTPRCP08575 1304 aa12.46□□□□□ -0.41
HDAC6-207ENST00000430858 HSPA6P17066 643 aa12.46□□□□□ -0.41
HDAC6-207ENST00000430858 KIAA2012Q0VF49 1180 aa12.46□□□□□ -0.41
HDAC6-207ENST00000430858 GPC2Q8N158 579 aa12.46□□□□□ -0.41
HDAC6-207ENST00000430858 SMC1BQ8NDV3 1235 aa12.46□□□□□ -0.41
HDAC6-207ENST00000430858 SSH1Q8WYL5 1049 aa12.46□□□□□ -0.41
HDAC6-207ENST00000430858 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
HDAC6-207ENST00000430858 ALDH1L1O75891 902 aa12.45□□□□□ -0.42
HDAC6-207ENST00000430858 GPSM2P81274 684 aa12.45□□□□□ -0.42
HDAC6-207ENST00000430858 SLC4A10Q6U841 1118 aa12.45□□□□□ -0.42
HDAC6-207ENST00000430858 SRCIN1Q9C0H9 1055 aa12.45□□□□□ -0.42
HDAC6-207ENST00000430858 GREM2Q9H772 168 aa12.45□□□□□ -0.42
HDAC6-207ENST00000430858 PODXL2Q9NZ53 605 aa12.45□□□□□ -0.42
HDAC6-207ENST00000430858 ZNRF3Q9ULT6 936 aa12.45□□□□□ -0.42
HDAC6-207ENST00000430858 GRM8O00222 908 aa12.44□□□□□ -0.42
HDAC6-207ENST00000430858 CSF1RP07333 972 aa12.44□□□□□ -0.42
HDAC6-207ENST00000430858 WASHC4Q2M389 1173 aa12.44□□□□□ -0.42
HDAC6-207ENST00000430858 EYA3Q99504 573 aa12.44□□□□□ -0.42
HDAC6-207ENST00000430858 SMC4Q9NTJ3 1288 aa12.44□□□□□ -0.42
HDAC6-207ENST00000430858 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-207ENST00000430858 POLLQ9UGP5 575 aa12.44□□□□□ -0.42
HDAC6-207ENST00000430858 LRRC37AA6NMS7 1700 aa12.44□□□□□ -0.42
HDAC6-207ENST00000430858 COL4A5P29400 1685 aa12.44□□□□□ -0.42
HDAC6-207ENST00000430858 COL4A1P02462 1669 aa12.43□□□□□ -0.42
HDAC6-207ENST00000430858 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
HDAC6-207ENST00000430858 IGHMBP2P38935 993 aaKnown RBP12.43□□□□□ -0.42
HDAC6-207ENST00000430858 TBC1D16Q8TBP0 767 aa12.43□□□□□ -0.42
HDAC6-207ENST00000430858 BCL2L13Q9BXK5 485 aa12.43□□□□□ -0.42
HDAC6-207ENST00000430858 TAF1DQ9H5J8 278 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-207ENST00000430858 C9orf78Q9NZ63 289 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-207ENST00000430858 ANKIB1Q9P2G1 1089 aa12.43□□□□□ -0.42
HDAC6-207ENST00000430858 HACL1Q9UJ83 578 aa12.43□□□□□ -0.42
HDAC6-207ENST00000430858 GGA1Q9UJY5 639 aa12.43□□□□□ -0.42
HDAC6-207ENST00000430858 GJA3Q9Y6H8 435 aa12.43□□□□□ -0.42
HDAC6-207ENST00000430858 DUOX1Q9NRD9 1551 aa12.43□□□□□ -0.42
HDAC6-207ENST00000430858 TAF1P21675 1872 aa12.42□□□□□ -0.42
HDAC6-207ENST00000430858 XDHP47989 1333 aa12.42□□□□□ -0.42
HDAC6-207ENST00000430858 ITGA6P23229 1130 aa12.42□□□□□ -0.42
HDAC6-207ENST00000430858 EPHX2P34913 555 aa12.42□□□□□ -0.42
HDAC6-207ENST00000430858 BRPF1P55201 1214 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-207ENST00000430858 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDAC6-207ENST00000430858 FAM161AQ3B820 660 aa12.42□□□□□ -0.42
HDAC6-207ENST00000430858 ANKRD18BA2A2Z9 1011 aa12.41□□□□□ -0.42
HDAC6-207ENST00000430858 UFL1O94874 794 aa12.41□□□□□ -0.42
HDAC6-207ENST00000430858 ATP2B4P23634 1241 aa12.41□□□□□ -0.42
HDAC6-207ENST00000430858 LMOD1P29536 600 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms