RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CCDC158Q5M9N0 1113 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 BPIFA3Q9BQP9 254 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 SMC3Q9UQE7 1217 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 SBNO1A3KN83 1393 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 ST5P78524 1137 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 ATP8B2P98198 1209 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 ARHGAP29Q52LW3 1261 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 ARFGAP3Q9NP61 516 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 SNX14Q9Y5W7 946 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 MAGEA9P43362 315 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 LRRFIP1Q32MZ4 808 aaKnown RBP6.04□□□□□ -1.44
RIF1-203ENST00000428287 RSRC2Q7L4I2 434 aaKnown RBP6.04□□□□□ -1.44
RIF1-203ENST00000428287 TICAM2Q86XR7 235 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 MPHOSPH8Q99549 860 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 A1CFQ9NQ94 594 aaKnown RBP6.04□□□□□ -1.44
RIF1-203ENST00000428287 EXOC6BQ9Y2D4 811 aa6.04□□□□□ -1.44
RIF1-203ENST00000428287 CLSTN2Q9H4D0 955 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 PNMA6EA0A0J9YXQ4 647 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 ST7Q9NRC1 585 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 RAB21Q9UL25 225 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 ACTN2P35609 894 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.03□□□□□ -1.44
RIF1-203ENST00000428287 AGXT2Q9BYV1 514 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 TRIM6-TRIM34B2RNG4 842 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 SASH3O75995 380 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 TPM1P09493 284 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 SNW1Q13573 536 aaKnown RBP6.03□□□□□ -1.44
RIF1-203ENST00000428287 FILIP1Q7Z7B0 1213 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 UTP14AQ9BVJ6 771 aaKnown RBP6.03□□□□□ -1.44
RIF1-203ENST00000428287 TRIM34Q9BYJ4 488 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 ZSCAN16Q9H4T2 348 aaPredicted RBP6.03□□□□□ -1.44
RIF1-203ENST00000428287 L1RE1Q9UN81 338 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 RAB11FIP3O75154 756 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 POLA2Q14181 598 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 FBXL16Q8N461 479 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 GPR161Q8N6U8 529 aaKnown RBP6.03□□□□□ -1.44
RIF1-203ENST00000428287 RSPH14Q9UHP6 348 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 TTC41PQ6P2S7 1318 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 CEP350Q5VT06 3117 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 DOCK2Q92608 1830 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 PSME1Q06323 249 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 ME3Q16798 604 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 SYT10Q6XYQ8 523 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 MAP4K1Q92918 833 aa6.03□□□□□ -1.44
RIF1-203ENST00000428287 NOL10Q9BSC4 688 aaKnown RBP6.03□□□□□ -1.44
RIF1-203ENST00000428287 NBPF6Q5VWK0 638 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 NBPF4Q96M43 638 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 CEP89Q96ST8 783 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 TNMDQ9H2S6 317 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 BABAM1Q9NWV8 329 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 SMC1AQ14683 1233 aaKnown RBP6.02□□□□□ -1.45
RIF1-203ENST00000428287 CLIP2Q9UDT6 1046 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 CFAP45Q9UL16 551 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 JRKLQ9Y4A0 524 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 PARP3Q9Y6F1 533 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 GLRX3O76003 335 aaKnown RBP6.02□□□□□ -1.45
RIF1-203ENST00000428287 NCAPHQ15003 741 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 TEX35Q5T0J7 233 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 USPL1Q5W0Q7 1092 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 UBXN4Q92575 508 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 PPP6R1Q9UPN7 881 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 POGZQ7Z3K3 1410 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 ABCC6O95255 1503 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 LOXHD1Q8IVV2 1947 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 CCDC69A6NI79 296 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 FCHSD1Q86WN1 690 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 BCORQ6W2J9 1755 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 PLCD3Q8N3E9 789 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 USP27XA6NNY8 438 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 HSD3B7Q9H2F3 369 aa6.02□□□□□ -1.45
RIF1-203ENST00000428287 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.02□□□□□ -1.451e-7■■□□□ 13.1
RIF1-203ENST00000428287 CASTP20810 708 aaKnown RBP6.01□□□□□ -1.45
RIF1-203ENST00000428287 ZCCHC17Q9NP64 241 aaKnown RBP6.01□□□□□ -1.45
RIF1-203ENST00000428287 MKRN1Q9UHC7 482 aaKnown RBP6.01□□□□□ -1.45
RIF1-203ENST00000428287 EMILIN1Q9Y6C2 1016 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 OVOS2A0A0J9YW53 1432 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 OVOS2Q6IE36 1432 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 IDI1Q13907 227 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 DIP2CQ9Y2E4 1556 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 TRIM66O15016 1216 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 JAKMIP3Q5VZ66 844 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 LCMT1Q9UIC8 334 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 ANKRD1Q15327 319 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 TPD52L1Q16890 204 aaPredicted RBP6.01□□□□□ -1.45
RIF1-203ENST00000428287 LARP1BQ659C4 914 aaKnown RBP6.01□□□□□ -1.45
RIF1-203ENST00000428287 TMEM139Q8IV31 216 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 LLPHQ9BRT6 129 aaKnown RBP6.01□□□□□ -1.45
RIF1-203ENST00000428287 CABP2Q9NPB3 220 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 RNF216Q9NWF9 866 aaPredicted RBP6.01□□□□□ -1.45
RIF1-203ENST00000428287 ELL2O00472 640 aaPredicted RBP6.01□□□□□ -1.45
RIF1-203ENST00000428287 CORO7P57737 925 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 TMCO3Q6UWJ1 677 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 ORC3Q9UBD5 711 aaPredicted RBP6.01□□□□□ -1.45
RIF1-203ENST00000428287 ARID5BQ14865 1188 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 ADCK5Q3MIX3 580 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 CC2D1AQ6P1N0 951 aaPredicted RBP6.01□□□□□ -1.45
RIF1-203ENST00000428287 CCDC61Q9Y6R9 512 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 MED23Q9ULK4 1368 aa6.01□□□□□ -1.45
RIF1-203ENST00000428287 FAM237AA0A1B0GTK4 181 aa6□□□□□ -1.45
RIF1-203ENST00000428287 LARGE1O95461 756 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms