RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 HMGB2P26583 209 aaKnown RBP14.95□□□□□ -0.02
RFC4-206ENST00000427785 NFIXQ14938 502 aa14.95□□□□□ -0.02
RFC4-206ENST00000427785 COL23A1Q86Y22 540 aaPredicted RBP14.95□□□□□ -0.02
RFC4-206ENST00000427785 SETDB2Q96T68 719 aa14.95□□□□□ -0.02
RFC4-206ENST00000427785 PDE8AO60658 829 aa14.94□□□□□ -0.02
RFC4-206ENST00000427785 ERFEQ4G0M1 354 aa14.94□□□□□ -0.02
RFC4-206ENST00000427785 NBPF5PQ86XG9 351 aaPredicted RBP14.94□□□□□ -0.02
RFC4-206ENST00000427785 OTUD7AQ8TE49 926 aaPredicted RBP14.94□□□□□ -0.02
RFC4-206ENST00000427785 LRRCC1Q9C099 1032 aa14.94□□□□□ -0.02
RFC4-206ENST00000427785 STK32BQ9NY57 414 aa14.94□□□□□ -0.02
RFC4-206ENST00000427785 NOP58Q9Y2X3 529 aaKnown RBP14.94□□□□□ -0.02
RFC4-206ENST00000427785 PTPN12Q05209 780 aaKnown RBP14.93□□□□□ -0.02
RFC4-206ENST00000427785 CCDC24Q8N4L8 307 aa14.93□□□□□ -0.02
RFC4-206ENST00000427785 RHPN1Q8TCX5 695 aa14.93□□□□□ -0.02
RFC4-206ENST00000427785 ZNF594Q96JF6 807 aaPredicted RBP14.93□□□□□ -0.02
RFC4-206ENST00000427785 GREM2Q9H772 168 aa14.93□□□□□ -0.02
RFC4-206ENST00000427785 IL1RAPL2Q9NP60 686 aa14.93□□□□□ -0.02
RFC4-206ENST00000427785 RIC1Q4ADV7 1423 aa14.92□□□□□ -0.02
RFC4-206ENST00000427785 RAB11FIP3O75154 756 aa14.92□□□□□ -0.02
RFC4-206ENST00000427785 HSP90AB4PQ58FF6 505 aa14.92□□□□□ -0.02
RFC4-206ENST00000427785 C3orf67Q6ZVT6 689 aa14.92□□□□□ -0.02
RFC4-206ENST00000427785 C16orf71Q8IYS4 520 aaPredicted RBP14.92□□□□□ -0.02
RFC4-206ENST00000427785 TTLL11Q8NHH1 800 aa14.92□□□□□ -0.02
RFC4-206ENST00000427785 NYXQ9GZU5 481 aa14.92□□□□□ -0.02
RFC4-206ENST00000427785 COPRSQ9NQ92 184 aa14.92□□□□□ -0.02
RFC4-206ENST00000427785 NPHP1O15259 732 aa14.91□□□□□ -0.02
RFC4-206ENST00000427785 CSF1RP07333 972 aa14.91□□□□□ -0.02
RFC4-206ENST00000427785 GTF2E1P29083 439 aaPredicted RBP14.91□□□□□ -0.02
RFC4-206ENST00000427785 DDR1Q08345 913 aa14.91□□□□□ -0.02
RFC4-206ENST00000427785 G3BP1Q13283 466 aaKnown RBP eCLIP14.91□□□□□ -0.02
RFC4-206ENST00000427785 SLC15A2Q16348 729 aa14.91□□□□□ -0.02
RFC4-206ENST00000427785 MSL1Q68DK7 614 aa14.91□□□□□ -0.02
RFC4-206ENST00000427785 ERC1Q8IUD2 1116 aa14.91□□□□□ -0.02
RFC4-206ENST00000427785 KIF1BPQ96EK5 621 aa14.91□□□□□ -0.02
RFC4-206ENST00000427785 ZNF609O15014 1411 aa14.91□□□□□ -0.02
RFC4-206ENST00000427785 ITGA6P23229 1130 aa14.9□□□□□ -0.02
RFC4-206ENST00000427785 IFIT5Q13325 482 aaKnown RBP14.9□□□□□ -0.02
RFC4-206ENST00000427785 CCDC57Q2TAC2 916 aa14.9□□□□□ -0.02
RFC4-206ENST00000427785 TAF7LQ5H9L4 462 aa14.9□□□□□ -0.02
RFC4-206ENST00000427785 CNBD1Q8NA66 436 aa14.9□□□□□ -0.02
RFC4-206ENST00000427785 FLAD1Q8NFF5 587 aa14.9□□□□□ -0.02
RFC4-206ENST00000427785 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.9□□□□□ -0.02
RFC4-206ENST00000427785 ANKRD18BA2A2Z9 1011 aa14.89□□□□□ -0.03
RFC4-206ENST00000427785 SASH1O94885 1247 aa14.89□□□□□ -0.03
RFC4-206ENST00000427785 PLEKHM2Q8IWE5 1019 aa14.89□□□□□ -0.03
RFC4-206ENST00000427785 PUS3Q9BZE2 481 aaKnown RBP14.89□□□□□ -0.03
RFC4-206ENST00000427785 RTL9Q8NET4 1388 aa14.88□□□□□ -0.03
RFC4-206ENST00000427785 MYH13Q9UKX3 1938 aa14.88□□□□□ -0.03
RFC4-206ENST00000427785 POLRMTO00411 1230 aaKnown RBP14.88□□□□□ -0.03
RFC4-206ENST00000427785 HSP90B1P14625 803 aaKnown RBP14.88□□□□□ -0.03
RFC4-206ENST00000427785 CCDC152Q4G0S7 254 aa14.88□□□□□ -0.03
RFC4-206ENST00000427785 LRRC24Q50LG9 513 aa14.88□□□□□ -0.03
RFC4-206ENST00000427785 TSHZ3Q63HK5 1081 aa14.88□□□□□ -0.03
RFC4-206ENST00000427785 PRR5LQ6MZQ0 368 aa14.88□□□□□ -0.03
RFC4-206ENST00000427785 SALL3Q9BXA9 1300 aa14.88□□□□□ -0.03
RFC4-206ENST00000427785 EYA2O00167 538 aa14.87□□□□□ -0.03
RFC4-206ENST00000427785 SERPINB2P05120 415 aa14.87□□□□□ -0.03
RFC4-206ENST00000427785 TM4SF1P30408 202 aa14.87□□□□□ -0.03
RFC4-206ENST00000427785 TFCP2Q12800 502 aa14.87□□□□□ -0.03
RFC4-206ENST00000427785 TPTE2Q6XPS3 522 aa14.87□□□□□ -0.03
RFC4-206ENST00000427785 ATG9AQ7Z3C6 839 aa14.87□□□□□ -0.03
RFC4-206ENST00000427785 AACSQ86V21 672 aa14.87□□□□□ -0.03
RFC4-206ENST00000427785 CCDC125Q86Z20 511 aa14.87□□□□□ -0.03
RFC4-206ENST00000427785 SEC31BQ9NQW1 1179 aa14.87□□□□□ -0.03
RFC4-206ENST00000427785 LRRC37AA6NMS7 1700 aa14.86□□□□□ -0.03
RFC4-206ENST00000427785 DLEC1Q9Y238 1755 aa14.86□□□□□ -0.03
RFC4-206ENST00000427785 CIAO1O76071 339 aa14.86□□□□□ -0.03
RFC4-206ENST00000427785 MX1P20591 662 aa14.86□□□□□ -0.03
RFC4-206ENST00000427785 MMP10P09238 476 aa14.85□□□□□ -0.03
RFC4-206ENST00000427785 IL15P40933 162 aaPredicted RBP14.85□□□□□ -0.03
RFC4-206ENST00000427785 ST5P78524 1137 aa14.85□□□□□ -0.03
RFC4-206ENST00000427785 SLC10A5Q5PT55 438 aa14.85□□□□□ -0.03
RFC4-206ENST00000427785 CLASRPQ8N2M8 674 aaKnown RBP14.85□□□□□ -0.03
RFC4-206ENST00000427785 TLR7Q9NYK1 1049 aaKnown RBP14.85□□□□□ -0.03
RFC4-206ENST00000427785 MYH7P12883 1935 aa14.85□□□□□ -0.03
RFC4-206ENST00000427785 GSPT1P15170 499 aaKnown RBP14.84□□□□□ -0.03
RFC4-206ENST00000427785 PDE1AP54750 535 aa14.84□□□□□ -0.03
RFC4-206ENST00000427785 SF3B3Q15393 1217 aaKnown RBP14.84□□□□□ -0.03
RFC4-206ENST00000427785 TTC22Q5TAA0 569 aa14.84□□□□□ -0.03
RFC4-206ENST00000427785 NLGN1Q8N2Q7 840 aa14.84□□□□□ -0.03
RFC4-206ENST00000427785 UPF1Q92900 1129 aaKnown RBP eCLIP14.84□□□□□ -0.03
RFC4-206ENST00000427785 PDGFDQ9GZP0 370 aaPredicted RBP14.84□□□□□ -0.03
RFC4-206ENST00000427785 CNNM1Q9NRU3 951 aa14.84□□□□□ -0.03
RFC4-206ENST00000427785 KIF13BQ9NQT8 1826 aa14.84□□□□□ -0.03
RFC4-206ENST00000427785 MYO5AQ9Y4I1 1855 aaKnown RBP14.83□□□□□ -0.04
RFC4-206ENST00000427785 IFIT2P09913 472 aaKnown RBP14.83□□□□□ -0.04
RFC4-206ENST00000427785 TNNI3KQ59H18 835 aa14.83□□□□□ -0.04
RFC4-206ENST00000427785 EAF2Q96CJ1 260 aaPredicted RBP14.83□□□□□ -0.04
RFC4-206ENST00000427785 NLRP3Q96P20 1036 aa14.83□□□□□ -0.04
RFC4-206ENST00000427785 CCDC8Q9H0W5 538 aaPredicted RBP14.83□□□□□ -0.04
RFC4-206ENST00000427785 FPGT-TNNI3KV9GXZ4 949 aa14.83□□□□□ -0.04
RFC4-206ENST00000427785 AKAP11Q9UKA4 1901 aa14.83□□□□□ -0.04
RFC4-206ENST00000427785 IGHMBP2P38935 993 aaKnown RBP14.82□□□□□ -0.04
RFC4-206ENST00000427785 C8orf34Q49A92 452 aa14.82□□□□□ -0.04
RFC4-206ENST00000427785 BMP2KLQ5H9B9 411 aa14.82□□□□□ -0.04
RFC4-206ENST00000427785 METTL24Q5JXM2 366 aa14.82□□□□□ -0.04
RFC4-206ENST00000427785 LDHAL6AQ6ZMR3 332 aa14.82□□□□□ -0.04
RFC4-206ENST00000427785 CDC5LQ99459 802 aaKnown RBP14.82□□□□□ -0.04
RFC4-206ENST00000427785 FBXO3Q9UK99 471 aa14.82□□□□□ -0.04
RFC4-206ENST00000427785 PARP3Q9Y6F1 533 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms