RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TLR7Q9NYK1 1049 aaKnown RBP18.57■□□□□ 0.56
ACTB-204ENST00000425660 TAF1LQ8IZX4 1826 aa18.57■□□□□ 0.56
ACTB-204ENST00000425660 CHMLP26374 656 aa18.56■□□□□ 0.56
ACTB-204ENST00000425660 IFIT5Q13325 482 aaKnown RBP18.56■□□□□ 0.56
ACTB-204ENST00000425660 CNTROBQ8N137 903 aa18.56■□□□□ 0.56
ACTB-204ENST00000425660 CCDC8Q9H0W5 538 aaPredicted RBP18.56■□□□□ 0.56
ACTB-204ENST00000425660 DBNLQ9UJU6 430 aaKnown RBP18.56■□□□□ 0.56
ACTB-204ENST00000425660 NIP7Q9Y221 180 aaKnown RBP eCLIP18.56■□□□□ 0.56
ACTB-204ENST00000425660 REC8O95072 547 aa18.56■□□□□ 0.56
ACTB-204ENST00000425660 NTSR2O95665 410 aa18.56■□□□□ 0.56
ACTB-204ENST00000425660 ZNF594Q96JF6 807 aaPredicted RBP18.56■□□□□ 0.56
ACTB-204ENST00000425660 NARFQ9UHQ1 456 aa18.56■□□□□ 0.56
ACTB-204ENST00000425660 GNPATO15228 680 aa18.55■□□□□ 0.56
ACTB-204ENST00000425660 LRRC24Q50LG9 513 aa18.55■□□□□ 0.56
ACTB-204ENST00000425660 C4BP0C0L5 1744 aa18.55■□□□□ 0.56
ACTB-204ENST00000425660 HSP90B1P14625 803 aaKnown RBP18.54■□□□□ 0.56
ACTB-204ENST00000425660 ESYT1Q9BSJ8 1104 aa18.54■□□□□ 0.56
ACTB-204ENST00000425660 USP26Q9BXU7 913 aa18.54■□□□□ 0.56
ACTB-204ENST00000425660 GREM2Q9H772 168 aa18.54■□□□□ 0.56
ACTB-204ENST00000425660 RTCBQ9Y3I0 505 aaKnown RBP18.54■□□□□ 0.56
ACTB-204ENST00000425660 MYH3P11055 1940 aa18.54■□□□□ 0.56
ACTB-204ENST00000425660 ITGA6P23229 1130 aa18.53■□□□□ 0.56
ACTB-204ENST00000425660 BCL2L12Q9HB09 334 aa18.53■□□□□ 0.56
ACTB-204ENST00000425660 LRRC4BQ9NT99 713 aa18.53■□□□□ 0.56
ACTB-204ENST00000425660 ATP5JP18859 108 aa18.53■□□□□ 0.56
ACTB-204ENST00000425660 SLC27A3Q5K4L6 730 aa18.53■□□□□ 0.56
ACTB-204ENST00000425660 EVI5LQ96CN4 794 aa18.53■□□□□ 0.56
ACTB-204ENST00000425660 KIF2CQ99661 725 aa18.53■□□□□ 0.56
ACTB-204ENST00000425660 PUS3Q9BZE2 481 aaKnown RBP18.53■□□□□ 0.56
ACTB-204ENST00000425660 LRP5O75197 1615 aa18.52■□□□□ 0.56
ACTB-204ENST00000425660 ZNF609O15014 1411 aa18.52■□□□□ 0.56
ACTB-204ENST00000425660 ANKRD18BA2A2Z9 1011 aa18.52■□□□□ 0.56
ACTB-204ENST00000425660 RTL9Q8NET4 1388 aa18.51■□□□□ 0.55
ACTB-204ENST00000425660 EPB41L2O43491 1005 aaKnown RBP18.51■□□□□ 0.55
ACTB-204ENST00000425660 AMIGO3Q86WK7 504 aa18.51■□□□□ 0.55
ACTB-204ENST00000425660 RIPOR2Q9Y4F9 1068 aa18.51■□□□□ 0.55
ACTB-204ENST00000425660 LAMB2P55268 1798 aa18.51■□□□□ 0.55
ACTB-204ENST00000425660 MAP4K4O95819 1239 aaPredicted RBP18.51■□□□□ 0.55
ACTB-204ENST00000425660 CCDC85AQ96PX6 553 aaPredicted RBP18.51■□□□□ 0.55
ACTB-204ENST00000425660 DBNDD2Q9BQY9 259 aa18.51■□□□□ 0.55
ACTB-204ENST00000425660 DDX60Q8IY21 1712 aaKnown RBP18.5■□□□□ 0.55
ACTB-204ENST00000425660 TRIM37O94972 964 aa18.5■□□□□ 0.55
ACTB-204ENST00000425660 ADRA2BP18089 450 aa18.5■□□□□ 0.55
ACTB-204ENST00000425660 TAF7LQ5H9L4 462 aa18.5■□□□□ 0.55
ACTB-204ENST00000425660 USPL1Q5W0Q7 1092 aa18.5■□□□□ 0.55
ACTB-204ENST00000425660 ARHGEF1Q92888 912 aaKnown RBP18.5■□□□□ 0.55
ACTB-204ENST00000425660 CEP126Q9P2H0 1117 aa18.5■□□□□ 0.55
ACTB-204ENST00000425660 HCLS1P14317 486 aaPredicted RBP18.49■□□□□ 0.55
ACTB-204ENST00000425660 BECN1Q14457 450 aa18.49■□□□□ 0.55
ACTB-204ENST00000425660 AKAP2Q9Y2D5 859 aa18.49■□□□□ 0.55
ACTB-204ENST00000425660 RIC1Q4ADV7 1423 aa18.49■□□□□ 0.55
ACTB-204ENST00000425660 ZPR1O75312 459 aa18.49■□□□□ 0.55
ACTB-204ENST00000425660 HMGB2P26583 209 aaKnown RBP18.49■□□□□ 0.55
ACTB-204ENST00000425660 TBC1D9BQ66K14 1250 aa18.49■□□□□ 0.55
ACTB-204ENST00000425660 LDHAL6AQ6ZMR3 332 aa18.49■□□□□ 0.55
ACTB-204ENST00000425660 SMIM5Q71RC9 77 aa18.49■□□□□ 0.55
ACTB-204ENST00000425660 AK9Q5TCS8 1911 aa18.48■□□□□ 0.55
ACTB-204ENST00000425660 COL24A1Q17RW2 1714 aa18.48■□□□□ 0.55
ACTB-204ENST00000425660 A0A1B0GUL7 405 aa18.48■□□□□ 0.55
ACTB-204ENST00000425660 BOLA2Q9H3K6 86 aa18.48■□□□□ 0.55
ACTB-204ENST00000425660 SRP68Q9UHB9 627 aaKnown RBP18.48■□□□□ 0.55
ACTB-204ENST00000425660 FAM177BA6PVY3 158 aa18.47■□□□□ 0.55
ACTB-204ENST00000425660 SGSM2O43147 1006 aa18.47■□□□□ 0.55
ACTB-204ENST00000425660 TIMM10P62072 90 aa18.47■□□□□ 0.55
ACTB-204ENST00000425660 CCDC152Q4G0S7 254 aa18.47■□□□□ 0.55
ACTB-204ENST00000425660 TRAPPC3LQ5T215 181 aa18.47■□□□□ 0.55
ACTB-204ENST00000425660 VGLL2Q8N8G2 317 aa18.47■□□□□ 0.55
ACTB-204ENST00000425660 IL25Q9H293 177 aa18.47■□□□□ 0.55
ACTB-204ENST00000425660 DAXXQ9UER7 740 aaPredicted RBP18.47■□□□□ 0.55
ACTB-204ENST00000425660 C4AP0C0L4 1744 aa18.47■□□□□ 0.55
ACTB-204ENST00000425660 SLC10A5Q5PT55 438 aa18.46■□□□□ 0.55
ACTB-204ENST00000425660 HAUS7Q99871 368 aa18.46■□□□□ 0.55
ACTB-204ENST00000425660 TBC1D2Q9BYX2 928 aa18.46■□□□□ 0.55
ACTB-204ENST00000425660 HIP1O00291 1037 aa18.46■□□□□ 0.55
ACTB-204ENST00000425660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.46■□□□□ 0.55
ACTB-204ENST00000425660 SNX21Q969T3 373 aa18.46■□□□□ 0.55
ACTB-204ENST00000425660 NEUROD6Q96NK8 337 aa18.46■□□□□ 0.55
ACTB-204ENST00000425660 NYXQ9GZU5 481 aa18.46■□□□□ 0.55
ACTB-204ENST00000425660 RFX7Q2KHR2 1363 aa18.46■□□□□ 0.55
ACTB-204ENST00000425660 RFC4P35249 363 aa18.45■□□□□ 0.54
ACTB-204ENST00000425660 SLC4A3P48751 1232 aa18.45■□□□□ 0.54
ACTB-204ENST00000425660 TICAM2Q86XR7 235 aa18.45■□□□□ 0.54
ACTB-204ENST00000425660 SETDB2Q96T68 719 aa18.45■□□□□ 0.54
ACTB-204ENST00000425660 PLSCR1O15162 318 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 SF3B3Q15393 1217 aaKnown RBP18.44■□□□□ 0.54
ACTB-204ENST00000425660 ERFEQ4G0M1 354 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 PROM2Q8N271 834 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 RUFY2Q8WXA3 655 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 IL17RAQ96F46 866 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 SNRKQ9NRH2 765 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 CNNM1Q9NRU3 951 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 DIAPH3Q9NSV4 1193 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 ABCC12Q96J65 1359 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 MROH5Q6ZUA9 1318 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 UBR3Q6ZT12 1888 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 METTL24Q5JXM2 366 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 ANO2Q9NQ90 1003 aa18.44■□□□□ 0.54
ACTB-204ENST00000425660 PDE8BO95263 885 aa18.43■□□□□ 0.54
ACTB-204ENST00000425660 SSFA2P28290 1259 aa18.43■□□□□ 0.54
ACTB-204ENST00000425660 TXNRD1Q16881 649 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms