RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 NR1I2O75469 434 aa8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 EPHA10Q5JZY3 1008 aa8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 PPP4R3BQ5MIZ7 849 aa8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 NALCNQ8IZF0 1738 aa8.91□□□□□ -0.98
SMARCC1-202ENST00000425518 IGKV5-2P06315 115 aa8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 KCNH5Q8NCM2 988 aa8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 BRF1Q92994 677 aa8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 SEC62Q99442 399 aaKnown RBP8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 DDX21Q9NR30 783 aaKnown RBP eCLIP8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 DIP2AQ14689 1571 aa8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 NWD1Q149M9 1564 aa8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 TAF5LO75529 589 aa8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 ZNF165P49910 485 aa8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 COPS6Q7L5N1 327 aa8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 ANKRD24Q8TF21 1146 aa8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 XAGE3Q8WTP9 111 aa8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 NEK1Q96PY6 1258 aa8.9□□□□□ -0.98
SMARCC1-202ENST00000425518 SPDYE4A6NLX3 237 aa8.9□□□□□ -0.99
SMARCC1-202ENST00000425518 GCP02774 474 aa8.9□□□□□ -0.99
SMARCC1-202ENST00000425518 Q6ZUG5 572 aa8.9□□□□□ -0.99
SMARCC1-202ENST00000425518 PGBD1Q96JS3 809 aa8.9□□□□□ -0.99
SMARCC1-202ENST00000425518 C16orf45Q96MC5 204 aaPredicted RBP8.9□□□□□ -0.99
SMARCC1-202ENST00000425518 DDX19AQ9NUU7 478 aaKnown RBP8.9□□□□□ -0.99
SMARCC1-202ENST00000425518 TOPAZ1Q8N9V7 1692 aa8.9□□□□□ -0.99
SMARCC1-202ENST00000425518 FBXW7Q969H0 707 aa8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 FAM208AQ9UK61 1670 aaKnown RBP8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 NPHP3Q7Z494 1330 aa8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 TFCP2Q12800 502 aa8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 DDX46Q7L014 1031 aaKnown RBP8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 UBR1Q8IWV7 1749 aa8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 PIK3C2AO00443 1686 aa8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 ELP1O95163 1332 aa8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 ATP5J2-PTCD1G3V325 749 aa8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 PTCD1O75127 700 aaKnown RBP8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 PDCL2Q8N4E4 241 aa8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 CLSTN2Q9H4D0 955 aa8.89□□□□□ -0.99
SMARCC1-202ENST00000425518 GTF2F1P35269 517 aaKnown RBP eCLIP8.88□□□□□ -0.991e-6■■■■□ 22.4
SMARCC1-202ENST00000425518 ZNF592Q92610 1267 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 DBNLQ9UJU6 430 aaKnown RBP8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 A0A087WWV3 80 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 NEURL1BA8MQ27 555 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 GOLGA6L19H0YKK7 550 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 PDIA4P13667 645 aaKnown RBP8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 ZNF75DP51815 510 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 ZC3H6P61129 1189 aaKnown RBP8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 GCKRQ14397 625 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 ORAI2Q96SN7 254 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 HMG20BQ9P0W2 317 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 CCT2P78371 535 aaKnown RBP8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 GUCY1B3Q02153 619 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 KRT32Q14532 448 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 PDIA6Q15084 440 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 SLFNL1Q499Z3 407 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 UBE3BQ7Z3V4 1068 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 NFATC2IPQ8NCF5 419 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 NEUROD6Q96NK8 337 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 DBNDD2Q9BQY9 259 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 FTOQ9C0B1 505 aaKnown RBP eCLIP8.88□□□□□ -0.992e-6■□□□□ 10.1
SMARCC1-202ENST00000425518 CLIP2Q9UDT6 1046 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 AXIN2Q9Y2T1 843 aa8.88□□□□□ -0.99
SMARCC1-202ENST00000425518 FMN2Q9NZ56 1722 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 RGPD8O14715 1765 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 GTF3C6Q969F1 213 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 TUBGCP6Q96RT7 1819 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 CYP21A2P08686 494 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 TNNT1P13805 278 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 ATP2B3Q16720 1220 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 TPD52L1Q16890 204 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 TNNI3KQ59H18 835 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 SMAP1Q8IYB5 467 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 NLRP2Q9NX02 1062 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 FPGT-TNNI3KV9GXZ4 949 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 ANKARQ7Z5J8 1434 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 ZSCAN25Q6NSZ9 544 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 ZNF790Q6PG37 636 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 ANKRD13DQ6ZTN6 518 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 ZHX1Q9UKY1 873 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 TAOK2Q9UL54 1235 aa8.87□□□□□ -0.99
SMARCC1-202ENST00000425518 BECN2A8MW95 431 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 RESTQ13127 1097 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 ARHGEF25Q86VW2 580 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 ERCC4Q92889 916 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 CFAP45Q9UL16 551 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 LRRC37A3O60309 1634 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 NPHP4O75161 1426 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 ATP5JP18859 108 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 U2AF2P26368 475 aaKnown RBP eCLIP8.86□□□□□ -0.991e-6■■■□□ 17.8
SMARCC1-202ENST00000425518 SCRN1Q12765 414 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 CHST3Q7LGC8 479 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 FILIP1Q7Z7B0 1213 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 CCAR1Q8IX12 1150 aaKnown RBP8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 CACTINQ8WUQ7 758 aaKnown RBP8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 USP16Q9Y5T5 823 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 U3KPZ7 1027 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 MED23Q9ULK4 1368 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 APOBRQ0VD83 1088 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 ARID5BQ14865 1188 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 MCMDC2Q4G0Z9 681 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 RAPGEF4Q8WZA2 1011 aa8.86□□□□□ -0.99
SMARCC1-202ENST00000425518 METTL22Q9BUU2 404 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms