RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
MDC1-205ENST00000425072 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
MDC1-205ENST00000425072 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
MDC1-205ENST00000425072 CEP350Q5VT06 3117 aa12.79□□□□□ -0.36
MDC1-205ENST00000425072 OS9Q13438 667 aaPredicted RBP12.78□□□□□ -0.36
MDC1-205ENST00000425072 CCDC152Q4G0S7 254 aa12.78□□□□□ -0.36
MDC1-205ENST00000425072 EPHA10Q5JZY3 1008 aa12.78□□□□□ -0.36
MDC1-205ENST00000425072 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
MDC1-205ENST00000425072 TTLL11Q8NHH1 800 aa12.78□□□□□ -0.36
MDC1-205ENST00000425072 CARMIL3Q8ND23 1372 aa12.78□□□□□ -0.36
MDC1-205ENST00000425072 ANKRD18BA2A2Z9 1011 aa12.77□□□□□ -0.37
MDC1-205ENST00000425072 SERPINB2P05120 415 aa12.77□□□□□ -0.37
MDC1-205ENST00000425072 TAF7LQ5H9L4 462 aa12.77□□□□□ -0.37
MDC1-205ENST00000425072 KIF1BPQ96EK5 621 aa12.77□□□□□ -0.37
MDC1-205ENST00000425072 LRRCC1Q9C099 1032 aa12.77□□□□□ -0.37
MDC1-205ENST00000425072 BCORQ6W2J9 1755 aa12.76□□□□□ -0.37
MDC1-205ENST00000425072 HCLS1P14317 486 aaPredicted RBP12.76□□□□□ -0.37
MDC1-205ENST00000425072 CTSWP56202 376 aa12.76□□□□□ -0.37
MDC1-205ENST00000425072 ST5P78524 1137 aa12.76□□□□□ -0.37
MDC1-205ENST00000425072 SF3B3Q15393 1217 aaKnown RBP12.76□□□□□ -0.37
MDC1-205ENST00000425072 ERFEQ4G0M1 354 aa12.76□□□□□ -0.37
MDC1-205ENST00000425072 SYNE4Q8N205 404 aa12.76□□□□□ -0.37
MDC1-205ENST00000425072 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
MDC1-205ENST00000425072 PNPLA7Q6ZV29 1317 aa12.76□□□□□ -0.37
MDC1-205ENST00000425072 PTPN12Q05209 780 aaKnown RBP12.75□□□□□ -0.37
MDC1-205ENST00000425072 NUTM1Q86Y26 1132 aa12.75□□□□□ -0.37
MDC1-205ENST00000425072 CNBD1Q8NA66 436 aa12.75□□□□□ -0.37
MDC1-205ENST00000425072 EXOC6BQ9Y2D4 811 aa12.75□□□□□ -0.37
MDC1-205ENST00000425072 CIAO1O76071 339 aa12.74□□□□□ -0.37
MDC1-205ENST00000425072 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
MDC1-205ENST00000425072 ITGA6P23229 1130 aa12.74□□□□□ -0.37
MDC1-205ENST00000425072 IL15P40933 162 aaPredicted RBP12.74□□□□□ -0.37
MDC1-205ENST00000425072 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
MDC1-205ENST00000425072 CLASRPQ8N2M8 674 aaKnown RBP12.74□□□□□ -0.37
MDC1-205ENST00000425072 RHPN1Q8TCX5 695 aa12.74□□□□□ -0.37
MDC1-205ENST00000425072 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
MDC1-205ENST00000425072 UTRNP46939 3433 aa12.74□□□□□ -0.37
MDC1-205ENST00000425072 MYH3P11055 1940 aa12.73□□□□□ -0.37
MDC1-205ENST00000425072 EYA2O00167 538 aa12.73□□□□□ -0.37
MDC1-205ENST00000425072 APBB1O00213 710 aa12.73□□□□□ -0.37
MDC1-205ENST00000425072 POLRMTO00411 1230 aaKnown RBP12.73□□□□□ -0.37
MDC1-205ENST00000425072 LDHAL6AQ6ZMR3 332 aa12.73□□□□□ -0.37
MDC1-205ENST00000425072 CDC5LQ99459 802 aaKnown RBP12.73□□□□□ -0.37
MDC1-205ENST00000425072 MPHOSPH8Q99549 860 aa12.73□□□□□ -0.37
MDC1-205ENST00000425072 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
MDC1-205ENST00000425072 GREM2Q9H772 168 aa12.73□□□□□ -0.37
MDC1-205ENST00000425072 C4AP0C0L4 1744 aa12.73□□□□□ -0.37
MDC1-205ENST00000425072 SCN7AQ01118 1682 aa12.73□□□□□ -0.37
MDC1-205ENST00000425072 RTL9Q8NET4 1388 aa12.72□□□□□ -0.37
MDC1-205ENST00000425072 IGHMBP2P38935 993 aaKnown RBP12.72□□□□□ -0.37
MDC1-205ENST00000425072 BRIP1Q9BX63 1249 aa12.72□□□□□ -0.37
MDC1-205ENST00000425072 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
MDC1-205ENST00000425072 CEP126Q9P2H0 1117 aa12.72□□□□□ -0.37
MDC1-205ENST00000425072 PA2G4Q9UQ80 394 aaKnown RBP12.72□□□□□ -0.37
MDC1-205ENST00000425072 MMP10P09238 476 aa12.71□□□□□ -0.37
MDC1-205ENST00000425072 PDE6BP35913 854 aa12.71□□□□□ -0.37
MDC1-205ENST00000425072 RGS3P49796 1198 aa12.71□□□□□ -0.37
MDC1-205ENST00000425072 C1QTNF8P60827 252 aa12.71□□□□□ -0.37
MDC1-205ENST00000425072 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
MDC1-205ENST00000425072 PRR5LQ6MZQ0 368 aa12.71□□□□□ -0.37
MDC1-205ENST00000425072 DDX46Q7L014 1031 aaKnown RBP12.71□□□□□ -0.37
MDC1-205ENST00000425072 CCDC85AQ96PX6 553 aaPredicted RBP12.71□□□□□ -0.37
MDC1-205ENST00000425072 SIL1Q9H173 461 aa12.71□□□□□ -0.37
MDC1-205ENST00000425072 GPR108Q9NPR9 543 aa12.71□□□□□ -0.37
MDC1-205ENST00000425072 CNNM1Q9NRU3 951 aa12.71□□□□□ -0.37
MDC1-205ENST00000425072 AKAP2Q9Y2D5 859 aa12.71□□□□□ -0.37
MDC1-205ENST00000425072 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.38
MDC1-205ENST00000425072 SMARCA5O60264 1052 aaPredicted RBP12.7□□□□□ -0.38
MDC1-205ENST00000425072 SASH1O94885 1247 aa12.7□□□□□ -0.38
MDC1-205ENST00000425072 IFIT2P09913 472 aaKnown RBP12.7□□□□□ -0.38
MDC1-205ENST00000425072 RPS8P62241 208 aaKnown RBP12.7□□□□□ -0.38
MDC1-205ENST00000425072 ANKRD18AQ8IVF6 992 aa12.7□□□□□ -0.38
MDC1-205ENST00000425072 ZNF784Q8NCA9 323 aaPredicted RBP12.7□□□□□ -0.38
MDC1-205ENST00000425072 KLHDC4Q8TBB5 520 aa12.7□□□□□ -0.38
MDC1-205ENST00000425072 RPGRQ92834 1020 aaKnown RBP12.7□□□□□ -0.38
MDC1-205ENST00000425072 RBM17Q96I25 401 aaKnown RBP12.7□□□□□ -0.38
MDC1-205ENST00000425072 MROH5Q6ZUA9 1318 aa12.69□□□□□ -0.38
MDC1-205ENST00000425072 KLRG2A4D1S0 409 aaPredicted RBP12.69□□□□□ -0.38
MDC1-205ENST00000425072 DDR1Q08345 913 aa12.69□□□□□ -0.38
MDC1-205ENST00000425072 GPATCH3Q96I76 525 aa12.69□□□□□ -0.38
MDC1-205ENST00000425072 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
MDC1-205ENST00000425072 RIPOR2Q9Y4F9 1068 aa12.69□□□□□ -0.38
MDC1-205ENST00000425072 BBOX1O75936 387 aa12.68□□□□□ -0.38
MDC1-205ENST00000425072 ALDH1B1P30837 517 aa12.68□□□□□ -0.38
MDC1-205ENST00000425072 ATG9AQ7Z3C6 839 aa12.68□□□□□ -0.38
MDC1-205ENST00000425072 C16orf71Q8IYS4 520 aaPredicted RBP12.68□□□□□ -0.38
MDC1-205ENST00000425072 BCL11AQ9H165 835 aa12.68□□□□□ -0.38
MDC1-205ENST00000425072 OSBPL3Q9H4L5 887 aa12.68□□□□□ -0.38
MDC1-205ENST00000425072 IL1RAPL2Q9NP60 686 aa12.68□□□□□ -0.38
MDC1-205ENST00000425072 BSDC1Q9NW68 430 aaPredicted RBP12.68□□□□□ -0.38
MDC1-205ENST00000425072 RIC1Q4ADV7 1423 aa12.68□□□□□ -0.38
MDC1-205ENST00000425072 PDE4AP27815 886 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 POLD1P28340 1107 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 HOXA10P31260 410 aaPredicted RBP12.67□□□□□ -0.38
MDC1-205ENST00000425072 TFCP2Q12800 502 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 LRRC24Q50LG9 513 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 METTL24Q5JXM2 366 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
MDC1-205ENST00000425072 TMC4Q7Z404 712 aa12.67□□□□□ -0.38
MDC1-205ENST00000425072 PLEKHM2Q8IWE5 1019 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms