RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 NPR1P16066 1061 aa8.79□□□□□ -1
LSM8-204ENST00000424702 CTSWP56202 376 aa8.79□□□□□ -1
LSM8-204ENST00000424702 BMP2KLQ5H9B9 411 aa8.79□□□□□ -1
LSM8-204ENST00000424702 SLF2Q8IX21 1173 aa8.79□□□□□ -1
LSM8-204ENST00000424702 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.79□□□□□ -1
LSM8-204ENST00000424702 MX1P20591 662 aa8.79□□□□□ -1
LSM8-204ENST00000424702 CCDC85AQ96PX6 553 aaPredicted RBP8.79□□□□□ -1
LSM8-204ENST00000424702 FAM89AQ96GI7 184 aa8.79□□□□□ -1
LSM8-204ENST00000424702 ISCA1Q9BUE6 129 aa8.79□□□□□ -1
LSM8-204ENST00000424702 C22orf23Q9BZE7 217 aa8.79□□□□□ -1
LSM8-204ENST00000424702 NBPF26B4DH59 902 aa8.78□□□□□ -1
LSM8-204ENST00000424702 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
LSM8-204ENST00000424702 INTS5Q6P9B9 1019 aaKnown RBP8.78□□□□□ -1
LSM8-204ENST00000424702 ZNF804AQ7Z570 1209 aa8.78□□□□□ -1
LSM8-204ENST00000424702 NBPF15Q8N660 670 aa8.78□□□□□ -1
LSM8-204ENST00000424702 UPF1Q92900 1129 aaKnown RBP eCLIP8.78□□□□□ -1
LSM8-204ENST00000424702 BBOX1O75936 387 aa8.78□□□□□ -1
LSM8-204ENST00000424702 CAMTA2O94983 1202 aa8.78□□□□□ -1
LSM8-204ENST00000424702 DIAPH3Q9NSV4 1193 aa8.78□□□□□ -1
LSM8-204ENST00000424702 ATF5Q9Y2D1 282 aaPredicted RBP8.78□□□□□ -1
LSM8-204ENST00000424702 IBTKQ9P2D0 1353 aaPredicted RBP8.78□□□□□ -1
LSM8-204ENST00000424702 WASHC4Q2M389 1173 aa8.78□□□□□ -1
LSM8-204ENST00000424702 AACSQ86V21 672 aa8.78□□□□□ -1
LSM8-204ENST00000424702 CNTROBQ8N137 903 aa8.78□□□□□ -1
LSM8-204ENST00000424702 ZGPATQ8N5A5 531 aaKnown RBP8.78□□□□□ -1
LSM8-204ENST00000424702 RHPN1Q8TCX5 695 aa8.78□□□□□ -1
LSM8-204ENST00000424702 JDP2Q8WYK2 163 aa8.78□□□□□ -1
LSM8-204ENST00000424702 JARID2Q92833 1246 aaPredicted RBP8.78□□□□□ -1
LSM8-204ENST00000424702 HCLS1P14317 486 aaPredicted RBP8.77□□□□□ -1
LSM8-204ENST00000424702 SPTY2D1Q68D10 685 aaPredicted RBP8.77□□□□□ -1
LSM8-204ENST00000424702 BRIP1Q9BX63 1249 aa8.77□□□□□ -1
LSM8-204ENST00000424702 PNMA6EA0A0J9YXQ4 647 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 NFIXQ14938 502 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 NUTM1Q86Y26 1132 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 MASTLQ96GX5 879 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 CAMKK2Q96RR4 588 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 TMOD2Q9NZR1 351 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 MROH5Q6ZUA9 1318 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 ZBTB7AO95365 584 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 RPS8P62241 208 aaKnown RBP8.77□□□□□ -1.01
LSM8-204ENST00000424702 C8orf34Q49A92 452 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 ZC3H12CQ9C0D7 883 aaKnown RBP8.77□□□□□ -1.01
LSM8-204ENST00000424702 RGPD2P0DJD1 1756 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 EYA2O00167 538 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 ATP2B3Q16720 1220 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 TTC22Q5TAA0 569 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 SIRT2Q8IXJ6 389 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 RGS17Q9UGC6 210 aaPredicted RBP8.77□□□□□ -1.01
LSM8-204ENST00000424702 GGA1Q9UJY5 639 aa8.77□□□□□ -1.01
LSM8-204ENST00000424702 THSD7AQ9UPZ6 1657 aa8.76□□□□□ -1.01
LSM8-204ENST00000424702 ATP2B4P23634 1241 aa8.76□□□□□ -1.01
LSM8-204ENST00000424702 TRIM34Q9BYJ4 488 aa8.76□□□□□ -1.01
LSM8-204ENST00000424702 BICC1Q9H694 974 aaKnown RBP8.76□□□□□ -1.01
LSM8-204ENST00000424702 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
LSM8-204ENST00000424702 DOT1LQ8TEK3 1739 aa8.76□□□□□ -1.01
LSM8-204ENST00000424702 PSDA5PKW4 1024 aaPredicted RBP8.76□□□□□ -1.01
LSM8-204ENST00000424702 LDHCP07864 332 aa8.76□□□□□ -1.01
LSM8-204ENST00000424702 ITGA6P23229 1130 aa8.76□□□□□ -1.01
LSM8-204ENST00000424702 CCDC93Q567U6 631 aa8.76□□□□□ -1.01
LSM8-204ENST00000424702 DALRD3Q5D0E6 543 aaKnown RBP8.76□□□□□ -1.01
LSM8-204ENST00000424702 C16orf71Q8IYS4 520 aaPredicted RBP8.76□□□□□ -1.01
LSM8-204ENST00000424702 ZNF34Q8IZ26 560 aa8.76□□□□□ -1.01
LSM8-204ENST00000424702 SSH3Q8TE77 659 aa8.76□□□□□ -1.01
LSM8-204ENST00000424702 DPP8Q6V1X1 898 aaPredicted RBP8.76□□□□□ -1.01
LSM8-204ENST00000424702 COL23A1Q86Y22 540 aaPredicted RBP8.76□□□□□ -1.01
LSM8-204ENST00000424702 SUCLG2Q96I99 432 aa8.76□□□□□ -1.01
LSM8-204ENST00000424702 PIM2Q9P1W9 311 aa8.76□□□□□ -1.01
LSM8-204ENST00000424702 H7C1W4 665 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 GLRX3O76003 335 aaKnown RBP8.75□□□□□ -1.01
LSM8-204ENST00000424702 PDE1AP54750 535 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 GPR162Q16538 588 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 TBC1D9BQ66K14 1250 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 PLEKHM2Q8IWE5 1019 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 TTLL6Q8N841 843 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 HDAC9Q9UKV0 1011 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 SCN11AQ9UI33 1791 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 TTF1Q15361 905 aaPredicted RBP8.75□□□□□ -1.01
LSM8-204ENST00000424702 ANO2Q9NQ90 1003 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 ZNF219Q9P2Y4 722 aaPredicted RBP8.75□□□□□ -1.01
LSM8-204ENST00000424702 ADCY9O60503 1353 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 PPEF1O14829 653 aaPredicted RBP8.75□□□□□ -1.01
LSM8-204ENST00000424702 SUSD4Q5VX71 490 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 RTKN2Q8IZC4 609 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 MPNDQ8N594 471 aa8.75□□□□□ -1.01
LSM8-204ENST00000424702 PA2G4Q9UQ80 394 aaKnown RBP8.75□□□□□ -1.01
LSM8-204ENST00000424702 GRAPQ13588 217 aa8.74□□□□□ -1.01
LSM8-204ENST00000424702 ERFEQ4G0M1 354 aa8.74□□□□□ -1.01
LSM8-204ENST00000424702 GRAPLQ8TC17 118 aaPredicted RBP8.74□□□□□ -1.01
LSM8-204ENST00000424702 NSFL1CQ9UNZ2 370 aaKnown RBP8.74□□□□□ -1.01
LSM8-204ENST00000424702 BCS1LQ9Y276 419 aa8.74□□□□□ -1.01
LSM8-204ENST00000424702 GYS1P13807 737 aa8.74□□□□□ -1.01
LSM8-204ENST00000424702 GSTO1P78417 241 aa8.74□□□□□ -1.01
LSM8-204ENST00000424702 PUM3Q15397 648 aaKnown RBP8.74□□□□□ -1.01
LSM8-204ENST00000424702 HLFQ16534 295 aa8.74□□□□□ -1.01
LSM8-204ENST00000424702 TPRNQ4KMQ1 711 aa8.74□□□□□ -1.01
LSM8-204ENST00000424702 STYK1Q6J9G0 422 aa8.74□□□□□ -1.01
LSM8-204ENST00000424702 CRAMP1Q96RY5 1269 aa8.74□□□□□ -1.01
LSM8-204ENST00000424702 PLA2G12BQ9BX93 195 aa8.74□□□□□ -1.01
LSM8-204ENST00000424702 NHSQ6T4R5 1651 aa8.74□□□□□ -1.01
LSM8-204ENST00000424702 UFL1O94874 794 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms