RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 BLOC1S2Q6QNY1 142 aa11.57□□□□□ -0.56
CMSS1-201ENST00000421999 TFCP2Q12800 502 aa11.56□□□□□ -0.56
CMSS1-201ENST00000421999 PIBF1Q8WXW3 757 aa11.56□□□□□ -0.56
CMSS1-201ENST00000421999 GJD4Q96KN9 370 aaPredicted RBP11.56□□□□□ -0.56
CMSS1-201ENST00000421999 ATG3Q9NT62 314 aa11.56□□□□□ -0.56
CMSS1-201ENST00000421999 CCDC69A6NI79 296 aa11.56□□□□□ -0.56
CMSS1-201ENST00000421999 FAM196AQ6ZSG2 479 aa11.56□□□□□ -0.56
CMSS1-201ENST00000421999 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
CMSS1-201ENST00000421999 PARP10Q53GL7 1025 aa11.56□□□□□ -0.56
CMSS1-201ENST00000421999 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.56□□□□□ -0.56
CMSS1-201ENST00000421999 BRPF1P55201 1214 aaPredicted RBP11.56□□□□□ -0.56
CMSS1-201ENST00000421999 JDP2Q8WYK2 163 aa11.56□□□□□ -0.56
CMSS1-201ENST00000421999 LDHCP07864 332 aa11.55□□□□□ -0.56
CMSS1-201ENST00000421999 TIMM10P62072 90 aa11.55□□□□□ -0.56
CMSS1-201ENST00000421999 IMMTQ16891 758 aaKnown RBP11.55□□□□□ -0.56
CMSS1-201ENST00000421999 SLF2Q8IX21 1173 aa11.55□□□□□ -0.56
CMSS1-201ENST00000421999 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
CMSS1-201ENST00000421999 ITGA6P23229 1130 aa11.55□□□□□ -0.56
CMSS1-201ENST00000421999 RABEP1Q15276 862 aa11.55□□□□□ -0.56
CMSS1-201ENST00000421999 TRIM22Q8IYM9 498 aa11.55□□□□□ -0.56
CMSS1-201ENST00000421999 EVI5LQ96CN4 794 aa11.55□□□□□ -0.56
CMSS1-201ENST00000421999 JAKMIP1Q96N16 626 aaKnown RBP11.55□□□□□ -0.56
CMSS1-201ENST00000421999 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.55□□□□□ -0.56
CMSS1-201ENST00000421999 NCAPD2Q15021 1401 aa11.55□□□□□ -0.56
CMSS1-201ENST00000421999 PLEKHM2Q8IWE5 1019 aa11.54□□□□□ -0.56
CMSS1-201ENST00000421999 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
CMSS1-201ENST00000421999 SLC4A8Q2Y0W8 1093 aa11.54□□□□□ -0.56
CMSS1-201ENST00000421999 WDR78Q5VTH9 848 aa11.54□□□□□ -0.56
CMSS1-201ENST00000421999 UPF3BQ9BZI7 483 aaKnown RBP11.54□□□□□ -0.56
CMSS1-201ENST00000421999 ZNF287Q9HBT7 754 aa11.54□□□□□ -0.56
CMSS1-201ENST00000421999 SPATA31A6Q5VVP1 1343 aa11.54□□□□□ -0.56
CMSS1-201ENST00000421999 USP32Q8NFA0 1604 aa11.54□□□□□ -0.56
CMSS1-201ENST00000421999 MAP2P11137 1827 aaKnown RBP11.54□□□□□ -0.56
CMSS1-201ENST00000421999 SPATA31A1Q5TZJ5 1347 aa11.54□□□□□ -0.56
CMSS1-201ENST00000421999 RIMBP2O15034 1052 aa11.54□□□□□ -0.56
CMSS1-201ENST00000421999 RANBP6O60518 1105 aaKnown RBP11.54□□□□□ -0.56
CMSS1-201ENST00000421999 PDE8AO60658 829 aa11.54□□□□□ -0.56
CMSS1-201ENST00000421999 IL6STP40189 918 aaPredicted RBP11.54□□□□□ -0.56
CMSS1-201ENST00000421999 MSL1Q68DK7 614 aa11.54□□□□□ -0.56
CMSS1-201ENST00000421999 KDM2BQ8NHM5 1336 aa11.53□□□□□ -0.56
CMSS1-201ENST00000421999 GRM1Q13255 1194 aa11.53□□□□□ -0.56
CMSS1-201ENST00000421999 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
CMSS1-201ENST00000421999 CCDC47Q96A33 483 aaKnown RBP11.53□□□□□ -0.56
CMSS1-201ENST00000421999 SSH2Q76I76 1423 aa11.53□□□□□ -0.56
CMSS1-201ENST00000421999 ADAMTSL3P82987 1691 aa11.53□□□□□ -0.56
CMSS1-201ENST00000421999 MAP3K15Q6ZN16 1313 aa11.53□□□□□ -0.56
CMSS1-201ENST00000421999 CPDO75976 1380 aa11.53□□□□□ -0.56
CMSS1-201ENST00000421999 PALLDQ8WX93 1383 aa11.53□□□□□ -0.56
CMSS1-201ENST00000421999 EYA2O00167 538 aa11.53□□□□□ -0.56
CMSS1-201ENST00000421999 WDHD1O75717 1129 aaPredicted RBP11.53□□□□□ -0.56
CMSS1-201ENST00000421999 BECN2A8MW95 431 aa11.53□□□□□ -0.56
CMSS1-201ENST00000421999 PRPF40BQ6NWY9 871 aaKnown RBP11.53□□□□□ -0.56
CMSS1-201ENST00000421999 GIGYF2Q6Y7W6 1299 aaKnown RBP11.53□□□□□ -0.56
CMSS1-201ENST00000421999 ZNF444Q8N0Y2 327 aaPredicted RBP11.53□□□□□ -0.56
CMSS1-201ENST00000421999 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
CMSS1-201ENST00000421999 BAG3O95817 575 aa11.52□□□□□ -0.56
CMSS1-201ENST00000421999 VPS72Q15906 364 aa11.52□□□□□ -0.56
CMSS1-201ENST00000421999 SOGA3Q5TF21 947 aa11.52□□□□□ -0.56
CMSS1-201ENST00000421999 USPL1Q5W0Q7 1092 aa11.52□□□□□ -0.56
CMSS1-201ENST00000421999 MYO1BO43795 1136 aa11.52□□□□□ -0.57
CMSS1-201ENST00000421999 MARCH10Q8NA82 808 aaPredicted RBP11.52□□□□□ -0.57
CMSS1-201ENST00000421999 JAG2Q9Y219 1238 aa11.52□□□□□ -0.57
CMSS1-201ENST00000421999 FEZ1Q99689 392 aa11.51□□□□□ -0.57
CMSS1-201ENST00000421999 CHMP5Q9NZZ3 219 aa11.51□□□□□ -0.57
CMSS1-201ENST00000421999 NUCB2P80303 420 aa11.51□□□□□ -0.57
CMSS1-201ENST00000421999 KIAA2012Q0VF49 1180 aa11.51□□□□□ -0.57
CMSS1-201ENST00000421999 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
CMSS1-201ENST00000421999 MYOM1P52179 1685 aa11.51□□□□□ -0.57
CMSS1-201ENST00000421999 KRT32Q14532 448 aa11.51□□□□□ -0.57
CMSS1-201ENST00000421999 SPTY2D1Q68D10 685 aaPredicted RBP11.51□□□□□ -0.57
CMSS1-201ENST00000421999 UQCRFS1P1P0C7P4 283 aa11.51□□□□□ -0.57
CMSS1-201ENST00000421999 PDCP20941 246 aa11.51□□□□□ -0.57
CMSS1-201ENST00000421999 SSH3Q8TE77 659 aa11.51□□□□□ -0.57
CMSS1-201ENST00000421999 DBNDD2Q9BQY9 259 aa11.51□□□□□ -0.57
CMSS1-201ENST00000421999 MCM2P49736 904 aa11.5□□□□□ -0.57
CMSS1-201ENST00000421999 CCDC73Q6ZRK6 1079 aa11.5□□□□□ -0.57
CMSS1-201ENST00000421999 CCDC82Q8N4S0 544 aa11.5□□□□□ -0.57
CMSS1-201ENST00000421999 NRXN3Q9Y4C0 1643 aa11.5□□□□□ -0.57
CMSS1-201ENST00000421999 A0A1B0GUL7 405 aa11.5□□□□□ -0.57
CMSS1-201ENST00000421999 DDX11L8A8MPP1 907 aa11.5□□□□□ -0.57
CMSS1-201ENST00000421999 TTF1Q15361 905 aaPredicted RBP11.5□□□□□ -0.57
CMSS1-201ENST00000421999 ZBTB38Q8NAP3 1195 aaPredicted RBP11.5□□□□□ -0.57
CMSS1-201ENST00000421999 SPATA31A5Q5VU36 1347 aa11.5□□□□□ -0.57
CMSS1-201ENST00000421999 SPATA31A7Q8IWB4 1347 aa11.5□□□□□ -0.57
CMSS1-201ENST00000421999 CEBPZQ03701 1054 aaKnown RBP11.5□□□□□ -0.57
CMSS1-201ENST00000421999 ANKRD1Q15327 319 aa11.5□□□□□ -0.57
CMSS1-201ENST00000421999 HDAC9Q9UKV0 1011 aa11.5□□□□□ -0.57
CMSS1-201ENST00000421999 ZNF213O14771 459 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 TAF5LO75529 589 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 RBM6P78332 1123 aaKnown RBP11.49□□□□□ -0.57
CMSS1-201ENST00000421999 IQCA1Q86XH1 822 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 COL3A1P02461 1466 aaPredicted RBP11.49□□□□□ -0.57
CMSS1-201ENST00000421999 CASTP20810 708 aaKnown RBP11.49□□□□□ -0.57
CMSS1-201ENST00000421999 ANO8Q9HCE9 1232 aaPredicted RBP11.49□□□□□ -0.57
CMSS1-201ENST00000421999 NRKQ7Z2Y5 1582 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 GOLGA6L19H0YKK7 550 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 C8orf34Q49A92 452 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 TNNI3KQ59H18 835 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 FPGT-TNNI3KV9GXZ4 949 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms