RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 LINS1Q8NG48 757 aa33.65■■■□□ 2.98
CDK9-202ENST00000421939 TAF1P21675 1872 aa33.65■■■□□ 2.98
CDK9-202ENST00000421939 PDE8AO60658 829 aa33.64■■■□□ 2.98
CDK9-202ENST00000421939 NMRK2Q9NPI5 230 aa33.64■■■□□ 2.98
CDK9-202ENST00000421939 F6X3S4 739 aa33.63■■■□□ 2.97
CDK9-202ENST00000421939 KIF3CO14782 793 aa33.62■■■□□ 2.97
CDK9-202ENST00000421939 GCKRQ14397 625 aa33.62■■■□□ 2.97
CDK9-202ENST00000421939 TMC4Q7Z404 712 aa33.62■■■□□ 2.97
CDK9-202ENST00000421939 LRRC37AA6NMS7 1700 aa33.62■■■□□ 2.97
CDK9-202ENST00000421939 GLTPD2A6NH11 291 aa33.61■■■□□ 2.97
CDK9-202ENST00000421939 IARSP41252 1262 aaKnown RBP33.61■■■□□ 2.97
CDK9-202ENST00000421939 SP8Q8IXZ3 490 aa33.61■■■□□ 2.97
CDK9-202ENST00000421939 COL4A1P02462 1669 aa33.61■■■□□ 2.97
CDK9-202ENST00000421939 CCDC152Q4G0S7 254 aa33.6■■■□□ 2.97
CDK9-202ENST00000421939 UBE3BQ7Z3V4 1068 aa33.6■■■□□ 2.97
CDK9-202ENST00000421939 MRPL50Q8N5N7 158 aaKnown RBP33.6■■■□□ 2.97
CDK9-202ENST00000421939 CELF1Q92879 486 aaKnown RBP33.6■■■□□ 2.97
CDK9-202ENST00000421939 H7C1W4 665 aa33.59■■■□□ 2.97
CDK9-202ENST00000421939 C1QTNF8P60827 252 aa33.59■■■□□ 2.97
CDK9-202ENST00000421939 SSH1Q8WYL5 1049 aa33.59■■■□□ 2.97
CDK9-202ENST00000421939 CTSWP56202 376 aa33.58■■■□□ 2.97
CDK9-202ENST00000421939 BEND3Q5T5X7 828 aa33.58■■■□□ 2.97
CDK9-202ENST00000421939 MYH3P11055 1940 aa33.57■■■□□ 2.97
CDK9-202ENST00000421939 HNRNPUQ00839 825 aaKnown RBP eCLIP33.57■■■□□ 2.96
CDK9-202ENST00000421939 CT47B1P0C2W7 299 aaPredicted RBP33.56■■■□□ 2.96
CDK9-202ENST00000421939 DPY19L2Q6NUT2 758 aa33.56■■■□□ 2.96
CDK9-202ENST00000421939 ALDH1L2Q3SY69 923 aa33.55■■■□□ 2.96
CDK9-202ENST00000421939 DPP8Q6V1X1 898 aaPredicted RBP33.55■■■□□ 2.96
CDK9-202ENST00000421939 CCDC85AQ96PX6 553 aaPredicted RBP33.55■■■□□ 2.96
CDK9-202ENST00000421939 BCL2L13Q9BXK5 485 aa33.55■■■□□ 2.96
CDK9-202ENST00000421939 SEC31BQ9NQW1 1179 aa33.55■■■□□ 2.96
CDK9-202ENST00000421939 CASP7P55210 303 aa33.54■■■□□ 2.96
CDK9-202ENST00000421939 MPNDQ8N594 471 aa33.54■■■□□ 2.96
CDK9-202ENST00000421939 RTFDC1Q9BY42 306 aaPredicted RBP33.54■■■□□ 2.96
CDK9-202ENST00000421939 PTPRCP08575 1304 aa33.53■■■□□ 2.96
CDK9-202ENST00000421939 COL4A5P29400 1685 aa33.53■■■□□ 2.96
CDK9-202ENST00000421939 RPS8P62241 208 aaKnown RBP33.53■■■□□ 2.96
CDK9-202ENST00000421939 SUPT20HQ8NEM7 779 aa33.53■■■□□ 2.96
CDK9-202ENST00000421939 RRAGCQ9HB90 399 aa33.53■■■□□ 2.96
CDK9-202ENST00000421939 SLC4A10Q6U841 1118 aa33.52■■■□□ 2.96
CDK9-202ENST00000421939 JDP2Q8WYK2 163 aa33.52■■■□□ 2.96
CDK9-202ENST00000421939 PLA2G12BQ9BX93 195 aa33.52■■■□□ 2.96
CDK9-202ENST00000421939 SMC4Q9NTJ3 1288 aa33.52■■■□□ 2.96
CDK9-202ENST00000421939 WDR90Q96KV7 1748 aa33.52■■■□□ 2.96
CDK9-202ENST00000421939 DUOX1Q9NRD9 1551 aa33.51■■■□□ 2.96
CDK9-202ENST00000421939 LARGE2Q8N3Y3 721 aa33.51■■■□□ 2.95
CDK9-202ENST00000421939 TTLL11Q8NHH1 800 aa33.51■■■□□ 2.95
CDK9-202ENST00000421939 RTL9Q8NET4 1388 aa33.5■■■□□ 2.95
CDK9-202ENST00000421939 ZNF541Q9H0D2 1346 aa33.5■■■□□ 2.95
CDK9-202ENST00000421939 PPIP5K2O43314 1243 aa33.49■■■□□ 2.95
CDK9-202ENST00000421939 ALDH1L1O75891 902 aa33.49■■■□□ 2.95
CDK9-202ENST00000421939 SRCIN1Q9C0H9 1055 aa33.49■■■□□ 2.95
CDK9-202ENST00000421939 VPS33BQ9H267 617 aa33.49■■■□□ 2.95
CDK9-202ENST00000421939 FZD9O00144 591 aa33.48■■■□□ 2.95
CDK9-202ENST00000421939 GREM2Q9H772 168 aa33.48■■■□□ 2.95
CDK9-202ENST00000421939 DDNO94850 711 aaPredicted RBP33.47■■■□□ 2.95
CDK9-202ENST00000421939 VEGFAP15692 232 aaPredicted RBP33.47■■■□□ 2.95
CDK9-202ENST00000421939 AOC3Q16853 763 aa33.47■■■□□ 2.95
CDK9-202ENST00000421939 ANKRD18AQ8IVF6 992 aa33.47■■■□□ 2.95
CDK9-202ENST00000421939 C16orf71Q8IYS4 520 aaPredicted RBP33.47■■■□□ 2.95
CDK9-202ENST00000421939 CDC5LQ99459 802 aaKnown RBP33.47■■■□□ 2.95
CDK9-202ENST00000421939 LTBP1Q14766 1721 aa33.47■■■□□ 2.95
CDK9-202ENST00000421939 GRM8O00222 908 aa33.46■■■□□ 2.95
CDK9-202ENST00000421939 TOMM70O94826 608 aa33.46■■■□□ 2.95
CDK9-202ENST00000421939 NIM1KQ8IY84 436 aa33.46■■■□□ 2.95
CDK9-202ENST00000421939 NSFL1CQ9UNZ2 370 aaKnown RBP33.46■■■□□ 2.95
CDK9-202ENST00000421939 GPSM2P81274 684 aa33.44■■■□□ 2.94
CDK9-202ENST00000421939 KIAA2012Q0VF49 1180 aa33.43■■■□□ 2.94
CDK9-202ENST00000421939 C9orf78Q9NZ63 289 aaPredicted RBP33.43■■■□□ 2.94
CDK9-202ENST00000421939 EIF6P56537 245 aaKnown RBP33.42■■■□□ 2.94
CDK9-202ENST00000421939 FAM161AQ3B820 660 aa33.42■■■□□ 2.94
CDK9-202ENST00000421939 L3MBTL3Q96JM7 780 aaPredicted RBP33.42■■■□□ 2.94
CDK9-202ENST00000421939 POTECB2RU33 542 aa33.41■■■□□ 2.94
CDK9-202ENST00000421939 CSF1RP07333 972 aa33.41■■■□□ 2.94
CDK9-202ENST00000421939 RBM46Q8TBY0 533 aaKnown RBP33.41■■■□□ 2.94
CDK9-202ENST00000421939 SPEF2Q9C093 1822 aa33.41■■■□□ 2.94
CDK9-202ENST00000421939 ZBED9Q6R2W3 1325 aa33.4■■■□□ 2.94
CDK9-202ENST00000421939 RARSP54136 660 aaKnown RBP33.4■■■□□ 2.94
CDK9-202ENST00000421939 BRPF1P55201 1214 aaPredicted RBP33.4■■■□□ 2.94
CDK9-202ENST00000421939 C6orf229H3BNL8 230 aa33.39■■■□□ 2.94
CDK9-202ENST00000421939 ITGA6P23229 1130 aa33.39■■■□□ 2.94
CDK9-202ENST00000421939 GPC2Q8N158 579 aa33.39■■■□□ 2.94
CDK9-202ENST00000421939 PODXL2Q9NZ53 605 aa33.39■■■□□ 2.94
CDK9-202ENST00000421939 POLLQ9UGP5 575 aa33.39■■■□□ 2.94
CDK9-202ENST00000421939 FOXO4P98177 505 aa33.38■■■□□ 2.93
CDK9-202ENST00000421939 TBC1D16Q8TBP0 767 aa33.38■■■□□ 2.93
CDK9-202ENST00000421939 ANKIB1Q9P2G1 1089 aa33.38■■■□□ 2.93
CDK9-202ENST00000421939 WASHC4Q2M389 1173 aa33.37■■■□□ 2.93
CDK9-202ENST00000421939 BSDC1Q9NW68 430 aaPredicted RBP33.37■■■□□ 2.93
CDK9-202ENST00000421939 ZNRF3Q9ULT6 936 aa33.37■■■□□ 2.93
CDK9-202ENST00000421939 SCN4AP35499 1836 aa33.37■■■□□ 2.93
CDK9-202ENST00000421939 IQCA1LA6NCM1 817 aa33.36■■■□□ 2.93
CDK9-202ENST00000421939 IGHMBP2P38935 993 aaKnown RBP33.36■■■□□ 2.93
CDK9-202ENST00000421939 EYA3Q99504 573 aa33.36■■■□□ 2.93
CDK9-202ENST00000421939 NOB1Q9ULX3 412 aaKnown RBP33.36■■■□□ 2.93
CDK9-202ENST00000421939 UTYO14607 1347 aa33.35■■■□□ 2.93
CDK9-202ENST00000421939 XDHP47989 1333 aa33.35■■■□□ 2.93
CDK9-202ENST00000421939 UFL1O94874 794 aa33.35■■■□□ 2.93
CDK9-202ENST00000421939 EPHA10Q5JZY3 1008 aa33.35■■■□□ 2.93
CDK9-202ENST00000421939 GGA1Q9UJY5 639 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms