RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 FLIIQ13045 1269 aa23.13■■□□□ 1.29
UBXN11-208ENST00000421827 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
UBXN11-208ENST00000421827 CCER2I3L3R5 266 aa23.12■■□□□ 1.29
UBXN11-208ENST00000421827 IGKV5-2P06315 115 aa23.12■■□□□ 1.29
UBXN11-208ENST00000421827 TMC4Q7Z404 712 aa23.12■■□□□ 1.29
UBXN11-208ENST00000421827 ZNF541Q9H0D2 1346 aa23.11■■□□□ 1.29
UBXN11-208ENST00000421827 FZD9O00144 591 aa23.11■■□□□ 1.29
UBXN11-208ENST00000421827 FSTL1Q12841 308 aa23.11■■□□□ 1.29
UBXN11-208ENST00000421827 CEP350Q5VT06 3117 aa23.11■■□□□ 1.29
UBXN11-208ENST00000421827 FKBP5Q13451 457 aaPredicted RBP23.1■■□□□ 1.29
UBXN11-208ENST00000421827 DPP8Q6V1X1 898 aaPredicted RBP23.1■■□□□ 1.29
UBXN11-208ENST00000421827 LARGE2Q8N3Y3 721 aa23.1■■□□□ 1.29
UBXN11-208ENST00000421827 JARID2Q92833 1246 aaPredicted RBP23.1■■□□□ 1.29
UBXN11-208ENST00000421827 CELF1Q92879 486 aaKnown RBP23.1■■□□□ 1.29
UBXN11-208ENST00000421827 PDE8AO60658 829 aa23.09■■□□□ 1.29
UBXN11-208ENST00000421827 MPNDQ8N594 471 aa23.09■■□□□ 1.29
UBXN11-208ENST00000421827 SMC1BQ8NDV3 1235 aa23.09■■□□□ 1.29
UBXN11-208ENST00000421827 SUPT20HQ8NEM7 779 aa23.09■■□□□ 1.29
UBXN11-208ENST00000421827 L3MBTL3Q96JM7 780 aaPredicted RBP23.09■■□□□ 1.29
UBXN11-208ENST00000421827 RTFDC1Q9BY42 306 aaPredicted RBP23.09■■□□□ 1.29
UBXN11-208ENST00000421827 VPS33BQ9H267 617 aa23.09■■□□□ 1.29
UBXN11-208ENST00000421827 TAF1P21675 1872 aa23.09■■□□□ 1.29
UBXN11-208ENST00000421827 CACNA1FO60840 1977 aa23.09■■□□□ 1.29
UBXN11-208ENST00000421827 CDHR2Q9BYE9 1310 aa23.08■■□□□ 1.29
UBXN11-208ENST00000421827 NEURL1BA8MQ27 555 aa23.08■■□□□ 1.29
UBXN11-208ENST00000421827 CWF19L2Q2TBE0 894 aaKnown RBP23.08■■□□□ 1.29
UBXN11-208ENST00000421827 COL4A5P29400 1685 aa23.07■■□□□ 1.28
UBXN11-208ENST00000421827 IQCA1LA6NCM1 817 aa23.07■■□□□ 1.28
UBXN11-208ENST00000421827 PPIP5K2O43314 1243 aa23.07■■□□□ 1.28
UBXN11-208ENST00000421827 DNAAF4Q8WXU2 420 aa23.07■■□□□ 1.28
UBXN11-208ENST00000421827 EIF6P56537 245 aaKnown RBP23.06■■□□□ 1.28
UBXN11-208ENST00000421827 RPS8P62241 208 aaKnown RBP23.06■■□□□ 1.28
UBXN11-208ENST00000421827 AOC3Q16853 763 aa23.06■■□□□ 1.28
UBXN11-208ENST00000421827 CCDC152Q4G0S7 254 aa23.06■■□□□ 1.28
UBXN11-208ENST00000421827 NIM1KQ8IY84 436 aa23.06■■□□□ 1.28
UBXN11-208ENST00000421827 APLP1P51693 650 aa23.05■■□□□ 1.28
UBXN11-208ENST00000421827 GPC2Q8N158 579 aa23.05■■□□□ 1.28
UBXN11-208ENST00000421827 SEC31BQ9NQW1 1179 aa23.05■■□□□ 1.28
UBXN11-208ENST00000421827 E9PSI1 815 aa23.04■■□□□ 1.28
UBXN11-208ENST00000421827 LRRC37AA6NMS7 1700 aa23.03■■□□□ 1.28
UBXN11-208ENST00000421827 H7C1W4 665 aa23.03■■□□□ 1.28
UBXN11-208ENST00000421827 KIAA2012Q0VF49 1180 aa23.03■■□□□ 1.28
UBXN11-208ENST00000421827 GCKRQ14397 625 aa23.03■■□□□ 1.28
UBXN11-208ENST00000421827 LINS1Q8NG48 757 aa23.03■■□□□ 1.28
UBXN11-208ENST00000421827 CCDC85AQ96PX6 553 aaPredicted RBP23.03■■□□□ 1.28
UBXN11-208ENST00000421827 COL4A1P02462 1669 aa23.03■■□□□ 1.28
UBXN11-208ENST00000421827 CTSWP56202 376 aa23.02■■□□□ 1.28
UBXN11-208ENST00000421827 UBE3BQ7Z3V4 1068 aa23.02■■□□□ 1.28
UBXN11-208ENST00000421827 TAF1DQ9H5J8 278 aaPredicted RBP23.02■■□□□ 1.28
UBXN11-208ENST00000421827 HACL1Q9UJ83 578 aa23.02■■□□□ 1.28
UBXN11-208ENST00000421827 NSFL1CQ9UNZ2 370 aaKnown RBP23.02■■□□□ 1.28
UBXN11-208ENST00000421827 GJA3Q9Y6H8 435 aa23.02■■□□□ 1.28
UBXN11-208ENST00000421827 SCN4AP35499 1836 aa23.01■■□□□ 1.27
UBXN11-208ENST00000421827 ZNRF3Q9ULT6 936 aa23.01■■□□□ 1.27
UBXN11-208ENST00000421827 F6X3S4 739 aa23■■□□□ 1.27
UBXN11-208ENST00000421827 GPSM2P81274 684 aa23■■□□□ 1.27
UBXN11-208ENST00000421827 SLFN5Q08AF3 891 aa23■■□□□ 1.27
UBXN11-208ENST00000421827 TTLL11Q8NHH1 800 aa23■■□□□ 1.27
UBXN11-208ENST00000421827 DUOX1Q9NRD9 1551 aa23■■□□□ 1.27
UBXN11-208ENST00000421827 POTEIP0CG38 1075 aa22.99■■□□□ 1.27
UBXN11-208ENST00000421827 POTEJP0CG39 1038 aa22.99■■□□□ 1.27
UBXN11-208ENST00000421827 CHADLQ6NUI6 762 aa22.99■■□□□ 1.27
UBXN11-208ENST00000421827 BEND3Q5T5X7 828 aa22.98■■□□□ 1.27
UBXN11-208ENST00000421827 ANKRD18AQ8IVF6 992 aa22.98■■□□□ 1.27
UBXN11-208ENST00000421827 POLLQ9UGP5 575 aa22.98■■□□□ 1.27
UBXN11-208ENST00000421827 C6orf229H3BNL8 230 aa22.97■■□□□ 1.27
UBXN11-208ENST00000421827 EPHX2P34913 555 aa22.97■■□□□ 1.27
UBXN11-208ENST00000421827 CASP7P55210 303 aa22.97■■□□□ 1.27
UBXN11-208ENST00000421827 WASHC4Q2M389 1173 aa22.97■■□□□ 1.27
UBXN11-208ENST00000421827 CDCA7LQ96GN5 454 aa22.97■■□□□ 1.27
UBXN11-208ENST00000421827 CDC5LQ99459 802 aaKnown RBP22.97■■□□□ 1.27
UBXN11-208ENST00000421827 PLA2G12BQ9BX93 195 aa22.97■■□□□ 1.27
UBXN11-208ENST00000421827 GREM2Q9H772 168 aa22.97■■□□□ 1.27
UBXN11-208ENST00000421827 PODXL2Q9NZ53 605 aa22.97■■□□□ 1.27
UBXN11-208ENST00000421827 CXCL9Q07325 125 aa22.96■■□□□ 1.27
UBXN11-208ENST00000421827 LDHDQ86WU2 507 aa22.96■■□□□ 1.27
UBXN11-208ENST00000421827 TBC1D16Q8TBP0 767 aa22.96■■□□□ 1.27
UBXN11-208ENST00000421827 EYA3Q99504 573 aa22.96■■□□□ 1.27
UBXN11-208ENST00000421827 RTL9Q8NET4 1388 aa22.96■■□□□ 1.27
UBXN11-208ENST00000421827 LMOD1P29536 600 aaPredicted RBP22.95■■□□□ 1.26
UBXN11-208ENST00000421827 SCNN1DP51172 638 aa22.95■■□□□ 1.26
UBXN11-208ENST00000421827 EAPPQ56P03 285 aaPredicted RBP22.95■■□□□ 1.26
UBXN11-208ENST00000421827 DIEXFQ68CQ4 756 aaKnown RBP22.95■■□□□ 1.26
UBXN11-208ENST00000421827 PNMA8AQ86V59 439 aaPredicted RBP22.95■■□□□ 1.26
UBXN11-208ENST00000421827 ANKIB1Q9P2G1 1089 aa22.95■■□□□ 1.26
UBXN11-208ENST00000421827 MYH3P11055 1940 aa22.94■■□□□ 1.26
UBXN11-208ENST00000421827 CIAPIN1Q6FI81 312 aa22.94■■□□□ 1.26
UBXN11-208ENST00000421827 MRPL50Q8N5N7 158 aaKnown RBP22.94■■□□□ 1.26
UBXN11-208ENST00000421827 LTBP1Q14766 1721 aa22.94■■□□□ 1.26
UBXN11-208ENST00000421827 RIMBP2O15034 1052 aa22.93■■□□□ 1.26
UBXN11-208ENST00000421827 RAD17O75943 681 aa22.93■■□□□ 1.26
UBXN11-208ENST00000421827 TNIP1Q15025 636 aa22.93■■□□□ 1.26
UBXN11-208ENST00000421827 TRMT2AQ8IZ69 625 aaKnown RBP22.93■■□□□ 1.26
UBXN11-208ENST00000421827 GGA1Q9UJY5 639 aa22.93■■□□□ 1.26
UBXN11-208ENST00000421827 YDJCA8MPS7 323 aa22.92■■□□□ 1.26
UBXN11-208ENST00000421827 UFL1O94874 794 aa22.92■■□□□ 1.26
UBXN11-208ENST00000421827 CSF1RP07333 972 aa22.92■■□□□ 1.26
UBXN11-208ENST00000421827 EPS15P42566 896 aa22.92■■□□□ 1.26
UBXN11-208ENST00000421827 HTRA3P83110 453 aa22.92■■□□□ 1.26
UBXN11-208ENST00000421827 SLC4A10Q6U841 1118 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms