RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 SPEF2Q9C093 1822 aa22.66■■□□□ 1.22
MSL3-208ENST00000421368 LTBP3Q9NS15 1303 aa22.65■■□□□ 1.22
MSL3-208ENST00000421368 PPEF1O14829 653 aaPredicted RBP22.65■■□□□ 1.22
MSL3-208ENST00000421368 SLC4A10Q6U841 1118 aa22.65■■□□□ 1.22
MSL3-208ENST00000421368 CASP7P55210 303 aa22.64■■□□□ 1.21
MSL3-208ENST00000421368 GRAPQ13588 217 aa22.64■■□□□ 1.21
MSL3-208ENST00000421368 GRAPLQ8TC17 118 aaPredicted RBP22.64■■□□□ 1.21
MSL3-208ENST00000421368 RNF181Q9P0P0 153 aa22.64■■□□□ 1.21
MSL3-208ENST00000421368 LMNB1P20700 586 aa22.63■■□□□ 1.21
MSL3-208ENST00000421368 BRPF1P55201 1214 aaPredicted RBP22.63■■□□□ 1.21
MSL3-208ENST00000421368 ZNF784Q8NCA9 323 aaPredicted RBP22.63■■□□□ 1.21
MSL3-208ENST00000421368 TAOK3Q9H2K8 898 aa22.63■■□□□ 1.21
MSL3-208ENST00000421368 SRCIN1Q9C0H9 1055 aa22.62■■□□□ 1.21
MSL3-208ENST00000421368 ALDH1L1O75891 902 aa22.61■■□□□ 1.21
MSL3-208ENST00000421368 BBOX1O75936 387 aa22.61■■□□□ 1.21
MSL3-208ENST00000421368 CTSWP56202 376 aa22.61■■□□□ 1.21
MSL3-208ENST00000421368 CC2D2BQ6DHV5 1058 aa22.61■■□□□ 1.21
MSL3-208ENST00000421368 RTKN2Q8IZC4 609 aa22.61■■□□□ 1.21
MSL3-208ENST00000421368 CELF1Q92879 486 aaKnown RBP22.61■■□□□ 1.21
MSL3-208ENST00000421368 NOB1Q9ULX3 412 aaKnown RBP22.61■■□□□ 1.21
MSL3-208ENST00000421368 ATP6V0A2Q9Y487 856 aa22.61■■□□□ 1.21
MSL3-208ENST00000421368 FKBP4Q02790 459 aaKnown RBP eCLIP22.6■■□□□ 1.21
MSL3-208ENST00000421368 CCDC152Q4G0S7 254 aa22.6■■□□□ 1.21
MSL3-208ENST00000421368 CCDC85AQ96PX6 553 aaPredicted RBP22.6■■□□□ 1.21
MSL3-208ENST00000421368 PLA2G12BQ9BX93 195 aa22.6■■□□□ 1.21
MSL3-208ENST00000421368 SEC31BQ9NQW1 1179 aa22.6■■□□□ 1.21
MSL3-208ENST00000421368 TTLL11Q8NHH1 800 aa22.59■■□□□ 1.21
MSL3-208ENST00000421368 LTBP1Q14766 1721 aa22.58■■□□□ 1.21
MSL3-208ENST00000421368 GRM8O00222 908 aa22.58■■□□□ 1.21
MSL3-208ENST00000421368 SP8Q8IXZ3 490 aa22.58■■□□□ 1.21
MSL3-208ENST00000421368 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
MSL3-208ENST00000421368 BCAR3O75815 825 aa22.57■■□□□ 1.2
MSL3-208ENST00000421368 PSMD1Q99460 953 aa22.57■■□□□ 1.2
MSL3-208ENST00000421368 RTL9Q8NET4 1388 aa22.56■■□□□ 1.2
MSL3-208ENST00000421368 RPS8P62241 208 aaKnown RBP22.56■■□□□ 1.2
MSL3-208ENST00000421368 GRIPAP1Q4V328 841 aa22.56■■□□□ 1.2
MSL3-208ENST00000421368 TMC4Q7Z404 712 aa22.56■■□□□ 1.2
MSL3-208ENST00000421368 GREM2Q9H772 168 aa22.56■■□□□ 1.2
MSL3-208ENST00000421368 ZNF277Q9NRM2 450 aaPredicted RBP22.56■■□□□ 1.2
MSL3-208ENST00000421368 C9orf78Q9NZ63 289 aaPredicted RBP22.56■■□□□ 1.2
MSL3-208ENST00000421368 DUOX1Q9NRD9 1551 aa22.55■■□□□ 1.2
MSL3-208ENST00000421368 API5Q9BZZ5 524 aaKnown RBP22.55■■□□□ 1.2
MSL3-208ENST00000421368 ZC3H4Q9UPT8 1303 aaKnown RBP22.55■■□□□ 1.2
MSL3-208ENST00000421368 CSF1RP07333 972 aa22.54■■□□□ 1.2
MSL3-208ENST00000421368 FOXO4P98177 505 aa22.54■■□□□ 1.2
MSL3-208ENST00000421368 ZNF526Q8TF50 670 aaPredicted RBP22.54■■□□□ 1.2
MSL3-208ENST00000421368 TMX4Q9H1E5 349 aaPredicted RBP22.54■■□□□ 1.2
MSL3-208ENST00000421368 UTYO14607 1347 aa22.54■■□□□ 1.2
MSL3-208ENST00000421368 COL4A5P29400 1685 aa22.53■■□□□ 1.2
MSL3-208ENST00000421368 NBPF7P0C2Y1 421 aaPredicted RBP22.53■■□□□ 1.2
MSL3-208ENST00000421368 EPHA10Q5JZY3 1008 aa22.53■■□□□ 1.2
MSL3-208ENST00000421368 ARHGAP45Q92619 1136 aa22.53■■□□□ 1.2
MSL3-208ENST00000421368 IARSP41252 1262 aaKnown RBP22.52■■□□□ 1.2
MSL3-208ENST00000421368 FAM161AQ3B820 660 aa22.52■■□□□ 1.2
MSL3-208ENST00000421368 MPNDQ8N594 471 aa22.52■■□□□ 1.2
MSL3-208ENST00000421368 A0A1B0GUL6 1792 aa22.51■■□□□ 1.19
MSL3-208ENST00000421368 DPP8Q6V1X1 898 aaPredicted RBP22.51■■□□□ 1.19
MSL3-208ENST00000421368 ANKRD18AQ8IVF6 992 aa22.51■■□□□ 1.19
MSL3-208ENST00000421368 SUCLG2Q96I99 432 aa22.51■■□□□ 1.19
MSL3-208ENST00000421368 CDC5LQ99459 802 aaKnown RBP22.51■■□□□ 1.19
MSL3-208ENST00000421368 RTFDC1Q9BY42 306 aaPredicted RBP22.51■■□□□ 1.19
MSL3-208ENST00000421368 CCT4P50991 539 aaKnown RBP22.5■■□□□ 1.19
MSL3-208ENST00000421368 FRAT1Q92837 279 aaPredicted RBP22.5■■□□□ 1.19
MSL3-208ENST00000421368 KAZALD1Q96I82 304 aa22.5■■□□□ 1.19
MSL3-208ENST00000421368 USP44Q9H0E7 712 aa22.5■■□□□ 1.19
MSL3-208ENST00000421368 TNNQ9UQP3 1299 aa22.5■■□□□ 1.19
MSL3-208ENST00000421368 IPO8O15397 1037 aaKnown RBP22.49■■□□□ 1.19
MSL3-208ENST00000421368 ITGA6P23229 1130 aa22.49■■□□□ 1.19
MSL3-208ENST00000421368 GPSM2P81274 684 aa22.49■■□□□ 1.19
MSL3-208ENST00000421368 LMBR1LQ6UX01 489 aa22.49■■□□□ 1.19
MSL3-208ENST00000421368 GPBP1L1Q9HC44 474 aaPredicted RBP22.49■■□□□ 1.19
MSL3-208ENST00000421368 TRIM27P14373 513 aa22.48■■□□□ 1.19
MSL3-208ENST00000421368 ATF7IPQ6VMQ6 1270 aa22.48■■□□□ 1.19
MSL3-208ENST00000421368 SUPT20HQ8NEM7 779 aa22.47■■□□□ 1.19
MSL3-208ENST00000421368 NSFL1CQ9UNZ2 370 aaKnown RBP22.47■■□□□ 1.19
MSL3-208ENST00000421368 CHMP3Q9Y3E7 222 aa22.47■■□□□ 1.19
MSL3-208ENST00000421368 WDR90Q96KV7 1748 aa22.46■■□□□ 1.19
MSL3-208ENST00000421368 GLTPD2A6NH11 291 aa22.46■■□□□ 1.19
MSL3-208ENST00000421368 AOC3Q16853 763 aa22.46■■□□□ 1.19
MSL3-208ENST00000421368 INTS3Q68E01 1043 aaKnown RBP22.46■■□□□ 1.19
MSL3-208ENST00000421368 LARGE2Q8N3Y3 721 aa22.46■■□□□ 1.19
MSL3-208ENST00000421368 BSDC1Q9NW68 430 aaPredicted RBP22.46■■□□□ 1.19
MSL3-208ENST00000421368 ANKRD18BA2A2Z9 1011 aa22.45■■□□□ 1.18
MSL3-208ENST00000421368 PPIP5K2O43314 1243 aa22.45■■□□□ 1.18
MSL3-208ENST00000421368 ZKSCAN2Q63HK3 967 aa22.45■■□□□ 1.18
MSL3-208ENST00000421368 VPS33BQ9H267 617 aa22.45■■□□□ 1.18
MSL3-208ENST00000421368 BICC1Q9H694 974 aaKnown RBP22.45■■□□□ 1.18
MSL3-208ENST00000421368 PODXL2Q9NZ53 605 aa22.45■■□□□ 1.18
MSL3-208ENST00000421368 POLLQ9UGP5 575 aa22.45■■□□□ 1.18
MSL3-208ENST00000421368 KDM2BQ8NHM5 1336 aa22.45■■□□□ 1.18
MSL3-208ENST00000421368 IGHMBP2P38935 993 aaKnown RBP22.44■■□□□ 1.18
MSL3-208ENST00000421368 IFIT5Q13325 482 aaKnown RBP22.44■■□□□ 1.18
MSL3-208ENST00000421368 RABL6Q3YEC7 729 aaPredicted RBP22.44■■□□□ 1.18
MSL3-208ENST00000421368 ANKRD44Q8N8A2 993 aa22.44■■□□□ 1.18
MSL3-208ENST00000421368 CLUAP1Q96AJ1 413 aa22.44■■□□□ 1.18
MSL3-208ENST00000421368 NMRK2Q9NPI5 230 aa22.44■■□□□ 1.18
MSL3-208ENST00000421368 ZNF541Q9H0D2 1346 aa22.43■■□□□ 1.18
MSL3-208ENST00000421368 FZD9O00144 591 aa22.43■■□□□ 1.18
MSL3-208ENST00000421368 KIAA2012Q0VF49 1180 aa22.43■■□□□ 1.18
MSL3-208ENST00000421368 TBC1D16Q8TBP0 767 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms