RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 NECTIN1Q15223 517 aa13.11□□□□□ -0.31
DDX56-203ENST00000421223 KIF6Q6ZMV9 814 aa13.11□□□□□ -0.31
DDX56-203ENST00000421223 INTS4Q96HW7 963 aaKnown RBP13.11□□□□□ -0.31
DDX56-203ENST00000421223 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 FERMT3Q86UX7 667 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 RNF214Q8ND24 703 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 TTC14Q96N46 770 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 TAOK2Q9UL54 1235 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 TBC1D2BQ9UPU7 963 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
DDX56-203ENST00000421223 FIBPO43427 364 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 GJB2P29033 226 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 RNF20Q5VTR2 975 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 MAP4K1Q92918 833 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 TRIM44Q96DX7 344 aaPredicted RBP13.1□□□□□ -0.31
DDX56-203ENST00000421223 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.1□□□□□ -0.31
DDX56-203ENST00000421223 C5P01031 1676 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 WDR33Q9C0J8 1336 aaKnown RBP13.1□□□□□ -0.31
DDX56-203ENST00000421223 GADD45BO75293 160 aaPredicted RBP13.1□□□□□ -0.31
DDX56-203ENST00000421223 ATP5JP18859 108 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 SYT1P21579 422 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 CASP7P55210 303 aa13.1□□□□□ -0.31
DDX56-203ENST00000421223 RABL6Q3YEC7 729 aaPredicted RBP13.1□□□□□ -0.31
DDX56-203ENST00000421223 ANP32BQ92688 251 aaKnown RBP13.1□□□□□ -0.31
DDX56-203ENST00000421223 STARD3NLO95772 234 aa13.09□□□□□ -0.31
DDX56-203ENST00000421223 HSP90B1P14625 803 aaKnown RBP13.09□□□□□ -0.31
DDX56-203ENST00000421223 NASPP49321 788 aaPredicted RBP13.09□□□□□ -0.31
DDX56-203ENST00000421223 FOSBP53539 338 aa13.09□□□□□ -0.31
DDX56-203ENST00000421223 ME3Q16798 604 aa13.09□□□□□ -0.31
DDX56-203ENST00000421223 CLEC17AQ6ZS10 378 aa13.09□□□□□ -0.31
DDX56-203ENST00000421223 CCDC191Q8NCU4 936 aa13.09□□□□□ -0.31
DDX56-203ENST00000421223 CEP126Q9P2H0 1117 aa13.09□□□□□ -0.31
DDX56-203ENST00000421223 CNPY2Q9Y2B0 182 aa13.09□□□□□ -0.31
DDX56-203ENST00000421223 EXOC5O00471 708 aa13.09□□□□□ -0.31
DDX56-203ENST00000421223 HSP90AB3PQ58FF7 597 aa13.09□□□□□ -0.31
DDX56-203ENST00000421223 TMEM63CQ9P1W3 806 aa13.09□□□□□ -0.31
DDX56-203ENST00000421223 SCN11AQ9UI33 1791 aa13.09□□□□□ -0.31
DDX56-203ENST00000421223 A0A1B0GUL7 405 aa13.08□□□□□ -0.32
DDX56-203ENST00000421223 STX6O43752 255 aa13.08□□□□□ -0.32
DDX56-203ENST00000421223 IFIT1P09914 478 aaKnown RBP13.08□□□□□ -0.32
DDX56-203ENST00000421223 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
DDX56-203ENST00000421223 HLFQ16534 295 aa13.08□□□□□ -0.32
DDX56-203ENST00000421223 USP48Q86UV5 1035 aa13.08□□□□□ -0.32
DDX56-203ENST00000421223 ATG3Q9NT62 314 aa13.08□□□□□ -0.32
DDX56-203ENST00000421223 TPCN1Q9ULQ1 816 aa13.08□□□□□ -0.32
DDX56-203ENST00000421223 COL18A1P39060 1754 aa13.08□□□□□ -0.32
DDX56-203ENST00000421223 ATG9AQ7Z3C6 839 aa13.08□□□□□ -0.32
DDX56-203ENST00000421223 ZSWIM6Q9HCJ5 1215 aa13.08□□□□□ -0.32
DDX56-203ENST00000421223 EYA2O00167 538 aa13.07□□□□□ -0.32
DDX56-203ENST00000421223 TAF5LO75529 589 aa13.07□□□□□ -0.32
DDX56-203ENST00000421223 PSMA5P28066 241 aa13.07□□□□□ -0.32
DDX56-203ENST00000421223 TCIRG1Q13488 830 aa13.07□□□□□ -0.32
DDX56-203ENST00000421223 NKX1-1Q15270 411 aaPredicted RBP13.07□□□□□ -0.32
DDX56-203ENST00000421223 VPS53Q5VIR6 699 aa13.07□□□□□ -0.32
DDX56-203ENST00000421223 PAG1Q9NWQ8 432 aa13.07□□□□□ -0.32
DDX56-203ENST00000421223 ADORA1P30542 326 aa13.07□□□□□ -0.32
DDX56-203ENST00000421223 IL15P40933 162 aaPredicted RBP13.07□□□□□ -0.32
DDX56-203ENST00000421223 PIP4K2BP78356 416 aa13.07□□□□□ -0.32
DDX56-203ENST00000421223 WASHC4Q2M389 1173 aa13.07□□□□□ -0.32
DDX56-203ENST00000421223 FAM173BQ6P4H8 233 aa13.07□□□□□ -0.32
DDX56-203ENST00000421223 RRAGDQ9NQL2 400 aaPredicted RBP13.07□□□□□ -0.32
DDX56-203ENST00000421223 ZSCAN22P10073 491 aaPredicted RBP13.06□□□□□ -0.32
DDX56-203ENST00000421223 LARP1BQ659C4 914 aaKnown RBP13.06□□□□□ -0.32
DDX56-203ENST00000421223 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
DDX56-203ENST00000421223 ISY1Q9ULR0 285 aaKnown RBP13.06□□□□□ -0.32
DDX56-203ENST00000421223 EPB41L2O43491 1005 aaKnown RBP13.06□□□□□ -0.32
DDX56-203ENST00000421223 IFIT5Q13325 482 aaKnown RBP13.06□□□□□ -0.32
DDX56-203ENST00000421223 MCMDC2Q4G0Z9 681 aa13.06□□□□□ -0.32
DDX56-203ENST00000421223 CHST3Q7LGC8 479 aa13.06□□□□□ -0.32
DDX56-203ENST00000421223 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
DDX56-203ENST00000421223 ZBTB1Q9Y2K1 713 aa13.06□□□□□ -0.32
DDX56-203ENST00000421223 SIPA1L3O60292 1781 aaPredicted RBP13.06□□□□□ -0.32
DDX56-203ENST00000421223 TTC39AQ5SRH9 613 aa13.05□□□□□ -0.32
DDX56-203ENST00000421223 PI16Q6UXB8 463 aa13.05□□□□□ -0.32
DDX56-203ENST00000421223 DDX11Q96FC9 970 aa13.05□□□□□ -0.32
DDX56-203ENST00000421223 HAUS7Q99871 368 aa13.05□□□□□ -0.32
DDX56-203ENST00000421223 ERBB4Q15303 1308 aa13.05□□□□□ -0.32
DDX56-203ENST00000421223 TUBGCP6Q96RT7 1819 aa13.05□□□□□ -0.32
DDX56-203ENST00000421223 HELBQ8NG08 1087 aaPredicted RBP13.05□□□□□ -0.32
DDX56-203ENST00000421223 RBSNQ9H1K0 784 aa13.05□□□□□ -0.32
DDX56-203ENST00000421223 A0A0G2JLW4 131 aa13.05□□□□□ -0.32
DDX56-203ENST00000421223 DNM1Q05193 864 aaKnown RBP13.05□□□□□ -0.32
DDX56-203ENST00000421223 LDHAL6AQ6ZMR3 332 aa13.05□□□□□ -0.32
DDX56-203ENST00000421223 KBTBD3Q8NAB2 608 aa13.05□□□□□ -0.32
DDX56-203ENST00000421223 CNNM1Q9NRU3 951 aa13.05□□□□□ -0.32
DDX56-203ENST00000421223 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
DDX56-203ENST00000421223 METTL24Q5JXM2 366 aa13.04□□□□□ -0.32
DDX56-203ENST00000421223 ZSCAN31Q96LW9 406 aaPredicted RBP13.04□□□□□ -0.32
DDX56-203ENST00000421223 NEK1Q96PY6 1258 aa13.04□□□□□ -0.32
DDX56-203ENST00000421223 N4BP2Q86UW6 1770 aaPredicted RBP13.04□□□□□ -0.32
DDX56-203ENST00000421223 HAND2P61296 217 aa13.04□□□□□ -0.32
DDX56-203ENST00000421223 CCDC158Q5M9N0 1113 aa13.04□□□□□ -0.32
DDX56-203ENST00000421223 F13A1P00488 732 aa13.03□□□□□ -0.32
DDX56-203ENST00000421223 CYP21A2P08686 494 aa13.03□□□□□ -0.32
DDX56-203ENST00000421223 RPS6KB1P23443 525 aa13.03□□□□□ -0.32
DDX56-203ENST00000421223 SLC4A9Q96Q91 983 aa13.03□□□□□ -0.32
DDX56-203ENST00000421223 TM6SF1Q9BZW5 370 aa13.03□□□□□ -0.32
DDX56-203ENST00000421223 MBD3O95983 291 aa13.03□□□□□ -0.32
DDX56-203ENST00000421223 Q6ZUG5 572 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms