RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 RTN4Q9NQC3 1192 aaKnown RBP22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 SH2B1Q9NRF2 756 aaPredicted RBP22.74■■□□□ 1.23
CROCCP3-202ENST00000420820 LARGE1O95461 756 aa22.73■■□□□ 1.23
CROCCP3-202ENST00000420820 ZSCAN23Q3MJ62 389 aa22.73■■□□□ 1.23
CROCCP3-202ENST00000420820 CAVIN1Q6NZI2 390 aaKnown RBP22.73■■□□□ 1.23
CROCCP3-202ENST00000420820 PIGBQ92521 554 aa22.73■■□□□ 1.23
CROCCP3-202ENST00000420820 ALDH8A1Q9H2A2 487 aaPredicted RBP22.73■■□□□ 1.23
CROCCP3-202ENST00000420820 IL15P40933 162 aaPredicted RBP22.72■■□□□ 1.23
CROCCP3-202ENST00000420820 TCIRG1Q13488 830 aa22.72■■□□□ 1.23
CROCCP3-202ENST00000420820 TICAM2Q86XR7 235 aa22.72■■□□□ 1.23
CROCCP3-202ENST00000420820 COL22A1Q8NFW1 1626 aaPredicted RBP22.72■■□□□ 1.23
CROCCP3-202ENST00000420820 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.72■■□□□ 1.23
CROCCP3-202ENST00000420820 CIAO1O76071 339 aa22.72■■□□□ 1.23
CROCCP3-202ENST00000420820 BTG4Q9NY30 223 aa22.72■■□□□ 1.23
CROCCP3-202ENST00000420820 HMG20BQ9P0W2 317 aa22.72■■□□□ 1.23
CROCCP3-202ENST00000420820 TCHHQ07283 1943 aa22.72■■□□□ 1.23
CROCCP3-202ENST00000420820 PSMA5P28066 241 aa22.71■■□□□ 1.23
CROCCP3-202ENST00000420820 RNF20Q5VTR2 975 aa22.71■■□□□ 1.23
CROCCP3-202ENST00000420820 ASAP1Q9ULH1 1129 aa22.71■■□□□ 1.23
CROCCP3-202ENST00000420820 ZNF609O15014 1411 aa22.71■■□□□ 1.23
CROCCP3-202ENST00000420820 EYA2O00167 538 aa22.7■■□□□ 1.23
CROCCP3-202ENST00000420820 MBD3O95983 291 aa22.7■■□□□ 1.23
CROCCP3-202ENST00000420820 ST3GAL1Q11201 340 aa22.7■■□□□ 1.23
CROCCP3-202ENST00000420820 LARP6Q9BRS8 491 aaKnown RBP22.7■■□□□ 1.23
CROCCP3-202ENST00000420820 COL16A1Q07092 1604 aaPredicted RBP22.7■■□□□ 1.22
CROCCP3-202ENST00000420820 PALLDQ8WX93 1383 aa22.7■■□□□ 1.22
CROCCP3-202ENST00000420820 KCNJ4P48050 445 aa22.7■■□□□ 1.22
CROCCP3-202ENST00000420820 WNK3Q9BYP7 1800 aa22.7■■□□□ 1.22
CROCCP3-202ENST00000420820 SPEF2Q9C093 1822 aa22.7■■□□□ 1.22
CROCCP3-202ENST00000420820 DNAJC10Q8IXB1 793 aa22.69■■□□□ 1.22
CROCCP3-202ENST00000420820 NSFL1CQ9UNZ2 370 aaKnown RBP22.69■■□□□ 1.22
CROCCP3-202ENST00000420820 CHMP3Q9Y3E7 222 aa22.69■■□□□ 1.22
CROCCP3-202ENST00000420820 ZSCAN22P10073 491 aaPredicted RBP22.69■■□□□ 1.22
CROCCP3-202ENST00000420820 NCLP19338 710 aaKnown RBP22.69■■□□□ 1.22
CROCCP3-202ENST00000420820 SYT1P21579 422 aa22.69■■□□□ 1.22
CROCCP3-202ENST00000420820 KBTBD3Q8NAB2 608 aa22.69■■□□□ 1.22
CROCCP3-202ENST00000420820 TMEM87AQ8NBN3 555 aa22.69■■□□□ 1.22
CROCCP3-202ENST00000420820 PLA2G12BQ9BX93 195 aa22.69■■□□□ 1.22
CROCCP3-202ENST00000420820 SMC3Q9UQE7 1217 aa22.69■■□□□ 1.22
CROCCP3-202ENST00000420820 BCL9O00512 1426 aa22.68■■□□□ 1.22
CROCCP3-202ENST00000420820 AHDC1Q5TGY3 1603 aaPredicted RBP22.68■■□□□ 1.22
CROCCP3-202ENST00000420820 COL9A3Q14050 684 aaPredicted RBP22.68■■□□□ 1.22
CROCCP3-202ENST00000420820 ME3Q16798 604 aa22.68■■□□□ 1.22
CROCCP3-202ENST00000420820 TMEM63CQ9P1W3 806 aa22.68■■□□□ 1.22
CROCCP3-202ENST00000420820 TAF6LQ9Y6J9 622 aa22.68■■□□□ 1.22
CROCCP3-202ENST00000420820 STX6O43752 255 aa22.67■■□□□ 1.22
CROCCP3-202ENST00000420820 LRRC24Q50LG9 513 aa22.67■■□□□ 1.22
CROCCP3-202ENST00000420820 FBXO3Q9UK99 471 aa22.67■■□□□ 1.22
CROCCP3-202ENST00000420820 NDUFB9Q9Y6M9 179 aa22.67■■□□□ 1.22
CROCCP3-202ENST00000420820 SH3TC1Q8TE82 1336 aa22.67■■□□□ 1.22
CROCCP3-202ENST00000420820 PCCAP05165 728 aaPredicted RBP22.67■■□□□ 1.22
CROCCP3-202ENST00000420820 RPS6KB1P23443 525 aa22.67■■□□□ 1.22
CROCCP3-202ENST00000420820 CCDC83Q8IWF9 413 aa22.67■■□□□ 1.22
CROCCP3-202ENST00000420820 DNAJC2Q99543 621 aaKnown RBP22.67■■□□□ 1.22
CROCCP3-202ENST00000420820 RBM27Q9P2N5 1060 aaKnown RBP22.67■■□□□ 1.22
CROCCP3-202ENST00000420820 TPCN1Q9ULQ1 816 aa22.67■■□□□ 1.22
CROCCP3-202ENST00000420820 ROBO1Q9Y6N7 1651 aa22.66■■□□□ 1.22
CROCCP3-202ENST00000420820 MCMDC2Q4G0Z9 681 aa22.66■■□□□ 1.22
CROCCP3-202ENST00000420820 ANKRD36CQ5JPF3 1778 aa22.66■■□□□ 1.22
CROCCP3-202ENST00000420820 STARD3NLO95772 234 aa22.65■■□□□ 1.22
CROCCP3-202ENST00000420820 BLOC1S2Q6QNY1 142 aa22.65■■□□□ 1.22
CROCCP3-202ENST00000420820 CERKQ8TCT0 537 aa22.65■■□□□ 1.22
CROCCP3-202ENST00000420820 ZNF594Q96JF6 807 aaPredicted RBP22.65■■□□□ 1.22
CROCCP3-202ENST00000420820 CSF1RP07333 972 aa22.65■■□□□ 1.22
CROCCP3-202ENST00000420820 TIMM10P62072 90 aa22.65■■□□□ 1.22
CROCCP3-202ENST00000420820 ANKRD1Q15327 319 aa22.65■■□□□ 1.22
CROCCP3-202ENST00000420820 DDX46Q7L014 1031 aaKnown RBP22.65■■□□□ 1.22
CROCCP3-202ENST00000420820 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.65■■□□□ 1.22
CROCCP3-202ENST00000420820 CHGBP05060 677 aa22.64■■□□□ 1.21
CROCCP3-202ENST00000420820 GJB2P29033 226 aa22.64■■□□□ 1.21
CROCCP3-202ENST00000420820 KRT32Q14532 448 aa22.64■■□□□ 1.21
CROCCP3-202ENST00000420820 KIF6Q6ZMV9 814 aa22.64■■□□□ 1.21
CROCCP3-202ENST00000420820 U3KPZ7 1027 aaPredicted RBP22.64■■□□□ 1.21
CROCCP3-202ENST00000420820 MAP3K15Q6ZN16 1313 aa22.64■■□□□ 1.21
CROCCP3-202ENST00000420820 F13A1P00488 732 aa22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 ZBTB38Q8NAP3 1195 aaPredicted RBP22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 NEUROD6Q96NK8 337 aa22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 SLC4A9Q96Q91 983 aa22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 SEC62Q99442 399 aaKnown RBP22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 PUS3Q9BZE2 481 aaKnown RBP22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 PAG1Q9NWQ8 432 aa22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 TOB2Q14106 344 aaPredicted RBP22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 GIGYF2Q6Y7W6 1299 aaKnown RBP22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 USP48Q86UV5 1035 aa22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 HELLSQ9NRZ9 838 aa22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 MTMR6Q9Y217 621 aa22.63■■□□□ 1.21
CROCCP3-202ENST00000420820 CDHR2Q9BYE9 1310 aa22.62■■□□□ 1.21
CROCCP3-202ENST00000420820 A0A1B0GUL7 405 aa22.62■■□□□ 1.21
CROCCP3-202ENST00000420820 TOM1O60784 492 aa22.62■■□□□ 1.21
CROCCP3-202ENST00000420820 NASPP49321 788 aaPredicted RBP22.62■■□□□ 1.21
CROCCP3-202ENST00000420820 CYP19A1P11511 503 aaPredicted RBP22.61■■□□□ 1.21
CROCCP3-202ENST00000420820 PRIM1P49642 420 aaKnown RBP22.61■■□□□ 1.21
CROCCP3-202ENST00000420820 LRSAM1Q6UWE0 723 aa22.61■■□□□ 1.21
CROCCP3-202ENST00000420820 CCDC129Q6ZRS4 1044 aa22.61■■□□□ 1.21
CROCCP3-202ENST00000420820 PPP1R9BQ96SB3 815 aa22.61■■□□□ 1.21
CROCCP3-202ENST00000420820 PDIA4P13667 645 aaKnown RBP22.61■■□□□ 1.21
CROCCP3-202ENST00000420820 CCDC57Q2TAC2 916 aa22.61■■□□□ 1.21
CROCCP3-202ENST00000420820 RRAGDQ9NQL2 400 aaPredicted RBP22.61■■□□□ 1.21
CROCCP3-202ENST00000420820 LAMA4Q16363 1823 aa22.6■■□□□ 1.21
CROCCP3-202ENST00000420820 GOLIM4O00461 696 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms