RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 SASH1O94885 1247 aa18.39■□□□□ 0.53
SEC24D-202ENST00000419654 HSPA4P34932 840 aa18.39■□□□□ 0.53
SEC24D-202ENST00000419654 FOXO4P98177 505 aa18.39■□□□□ 0.53
SEC24D-202ENST00000419654 CUL4AQ13619 759 aa18.39■□□□□ 0.53
SEC24D-202ENST00000419654 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
SEC24D-202ENST00000419654 COPRSQ9NQ92 184 aa18.39■□□□□ 0.53
SEC24D-202ENST00000419654 ZBTB1Q9Y2K1 713 aa18.39■□□□□ 0.53
SEC24D-202ENST00000419654 G3BP1Q13283 466 aaKnown RBP eCLIP18.38■□□□□ 0.531e-6■■■□□ 15.2
SEC24D-202ENST00000419654 CLASRPQ8N2M8 674 aaKnown RBP18.38■□□□□ 0.53
SEC24D-202ENST00000419654 MPNDQ8N594 471 aa18.38■□□□□ 0.53
SEC24D-202ENST00000419654 USP21Q9UK80 565 aa18.38■□□□□ 0.53
SEC24D-202ENST00000419654 ZNF330Q9Y3S2 320 aaPredicted RBP18.38■□□□□ 0.53
SEC24D-202ENST00000419654 CNTROBQ8N137 903 aa18.38■□□□□ 0.53
SEC24D-202ENST00000419654 THSD7AQ9UPZ6 1657 aa18.38■□□□□ 0.53
SEC24D-202ENST00000419654 PTH1RQ03431 593 aa18.37■□□□□ 0.53
SEC24D-202ENST00000419654 KIAA1211Q6ZU35 1233 aa18.37■□□□□ 0.53
SEC24D-202ENST00000419654 RREB1Q92766 1687 aa18.37■□□□□ 0.53
SEC24D-202ENST00000419654 AK2P54819 239 aa18.37■□□□□ 0.53
SEC24D-202ENST00000419654 ANAPC15P60006 121 aa18.37■□□□□ 0.53
SEC24D-202ENST00000419654 PTPN12Q05209 780 aaKnown RBP18.37■□□□□ 0.53
SEC24D-202ENST00000419654 CCDC8Q9H0W5 538 aaPredicted RBP18.37■□□□□ 0.53
SEC24D-202ENST00000419654 TTC41PQ6P2S7 1318 aa18.37■□□□□ 0.53
SEC24D-202ENST00000419654 IL6STP40189 918 aaPredicted RBP18.36■□□□□ 0.53
SEC24D-202ENST00000419654 MCM2P49736 904 aa18.36■□□□□ 0.53
SEC24D-202ENST00000419654 GIGYF2Q6Y7W6 1299 aaKnown RBP18.36■□□□□ 0.53
SEC24D-202ENST00000419654 LSG1Q9H089 658 aaKnown RBP18.36■□□□□ 0.53
SEC24D-202ENST00000419654 LARGE1O95461 756 aa18.36■□□□□ 0.53
SEC24D-202ENST00000419654 CASTP20810 708 aaKnown RBP18.36■□□□□ 0.53
SEC24D-202ENST00000419654 HSPA1LP34931 641 aa18.36■□□□□ 0.53
SEC24D-202ENST00000419654 DIAPH3Q9NSV4 1193 aa18.36■□□□□ 0.53
SEC24D-202ENST00000419654 ANKRD36CQ5JPF3 1778 aa18.36■□□□□ 0.53
SEC24D-202ENST00000419654 COL9A3Q14050 684 aaPredicted RBP18.36■□□□□ 0.53
SEC24D-202ENST00000419654 AACSQ86V21 672 aa18.36■□□□□ 0.53
SEC24D-202ENST00000419654 LOC102724428A0A0B4J2F2 783 aa18.35■□□□□ 0.53
SEC24D-202ENST00000419654 SIK1P57059 783 aa18.35■□□□□ 0.53
SEC24D-202ENST00000419654 ADCK5Q3MIX3 580 aa18.35■□□□□ 0.53
SEC24D-202ENST00000419654 PRPF40BQ6NWY9 871 aaKnown RBP18.35■□□□□ 0.53
SEC24D-202ENST00000419654 LMBR1LQ6UX01 489 aa18.35■□□□□ 0.53
SEC24D-202ENST00000419654 PPP1R9BQ96SB3 815 aa18.35■□□□□ 0.53
SEC24D-202ENST00000419654 PALLDQ8WX93 1383 aa18.35■□□□□ 0.53
SEC24D-202ENST00000419654 RAD50Q92878 1312 aa18.35■□□□□ 0.53
SEC24D-202ENST00000419654 ZNF831Q5JPB2 1677 aa18.35■□□□□ 0.53
SEC24D-202ENST00000419654 KCNQ2O43526 872 aa18.35■□□□□ 0.53
SEC24D-202ENST00000419654 USP48Q86UV5 1035 aa18.35■□□□□ 0.53
SEC24D-202ENST00000419654 A0A0G2JS52 829 aa18.34■□□□□ 0.53
SEC24D-202ENST00000419654 IFIT2P09913 472 aaKnown RBP18.34■□□□□ 0.53
SEC24D-202ENST00000419654 INTS5Q6P9B9 1019 aaKnown RBP18.34■□□□□ 0.53
SEC24D-202ENST00000419654 RUFY3Q7L099 469 aa18.34■□□□□ 0.53
SEC24D-202ENST00000419654 ATP6V1AP38606 617 aa18.34■□□□□ 0.53
SEC24D-202ENST00000419654 HLFQ16534 295 aa18.34■□□□□ 0.53
SEC24D-202ENST00000419654 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
SEC24D-202ENST00000419654 TLR7Q9NYK1 1049 aaKnown RBP18.34■□□□□ 0.53
SEC24D-202ENST00000419654 CNPY2Q9Y2B0 182 aa18.34■□□□□ 0.53
SEC24D-202ENST00000419654 NUP98P52948 1817 aa18.34■□□□□ 0.53
SEC24D-202ENST00000419654 TCEANC2Q96MN5 208 aa18.33■□□□□ 0.53
SEC24D-202ENST00000419654 ERVV-1B6SEH8 477 aa18.33■□□□□ 0.52
SEC24D-202ENST00000419654 HSP90AB3PQ58FF7 597 aa18.33■□□□□ 0.52
SEC24D-202ENST00000419654 LRSAM1Q6UWE0 723 aa18.33■□□□□ 0.52
SEC24D-202ENST00000419654 EAF2Q96CJ1 260 aaPredicted RBP18.33■□□□□ 0.52
SEC24D-202ENST00000419654 PCCAP05165 728 aaPredicted RBP18.32■□□□□ 0.52
SEC24D-202ENST00000419654 EIF5P55010 431 aaKnown RBP18.32■□□□□ 0.52
SEC24D-202ENST00000419654 ITPK1Q13572 414 aa18.32■□□□□ 0.52
SEC24D-202ENST00000419654 CCDC83Q8IWF9 413 aa18.32■□□□□ 0.52
SEC24D-202ENST00000419654 FAM227BQ96M60 508 aa18.32■□□□□ 0.52
SEC24D-202ENST00000419654 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
SEC24D-202ENST00000419654 ECHDC1Q9NTX5 307 aa18.32■□□□□ 0.52
SEC24D-202ENST00000419654 CCDC87Q9NVE4 849 aa18.32■□□□□ 0.52
SEC24D-202ENST00000419654 GLRX3O76003 335 aaKnown RBP18.32■□□□□ 0.52
SEC24D-202ENST00000419654 COL5A3P25940 1745 aaPredicted RBP18.32■□□□□ 0.52
SEC24D-202ENST00000419654 MYH14Q7Z406 1995 aaKnown RBP18.32■□□□□ 0.52
SEC24D-202ENST00000419654 CRKLP46109 303 aaKnown RBP18.31■□□□□ 0.52
SEC24D-202ENST00000419654 INTS4Q96HW7 963 aaKnown RBP18.31■□□□□ 0.52
SEC24D-202ENST00000419654 NDUFB9Q9Y6M9 179 aa18.31■□□□□ 0.52
SEC24D-202ENST00000419654 DZIP3Q86Y13 1208 aaKnown RBP18.31■□□□□ 0.52
SEC24D-202ENST00000419654 ZBTB38Q8NAP3 1195 aaPredicted RBP18.31■□□□□ 0.52
SEC24D-202ENST00000419654 EDC3Q96F86 508 aaKnown RBP18.31■□□□□ 0.52
SEC24D-202ENST00000419654 GPATCH3Q96I76 525 aa18.31■□□□□ 0.52
SEC24D-202ENST00000419654 BOLA2Q9H3K6 86 aa18.31■□□□□ 0.52
SEC24D-202ENST00000419654 MSNP26038 577 aaKnown RBP18.3■□□□□ 0.52
SEC24D-202ENST00000419654 KCNJ4P48050 445 aa18.3■□□□□ 0.52
SEC24D-202ENST00000419654 NLRP10Q86W26 655 aa18.3■□□□□ 0.52
SEC24D-202ENST00000419654 NECAB1Q8N987 351 aa18.3■□□□□ 0.52
SEC24D-202ENST00000419654 PLA2G12BQ9BX93 195 aa18.3■□□□□ 0.52
SEC24D-202ENST00000419654 FIBPO43427 364 aa18.3■□□□□ 0.52
SEC24D-202ENST00000419654 MEX3CQ5U5Q3 659 aaKnown RBP18.3■□□□□ 0.52
SEC24D-202ENST00000419654 ZSCAN30Q86W11 494 aa18.3■□□□□ 0.52
SEC24D-202ENST00000419654 RPAP1Q9BWH6 1393 aaPredicted RBP18.3■□□□□ 0.52
SEC24D-202ENST00000419654 TTC14Q96N46 770 aa18.3■□□□□ 0.52
SEC24D-202ENST00000419654 GJD4Q96KN9 370 aaPredicted RBP18.29■□□□□ 0.52
SEC24D-202ENST00000419654 SYT1P21579 422 aa18.29■□□□□ 0.52
SEC24D-202ENST00000419654 TBC1D2BQ9UPU7 963 aa18.29■□□□□ 0.52
SEC24D-202ENST00000419654 AFF2P51816 1311 aa18.29■□□□□ 0.52
SEC24D-202ENST00000419654 CDHR2Q9BYE9 1310 aa18.29■□□□□ 0.52
SEC24D-202ENST00000419654 WDR33Q9C0J8 1336 aaKnown RBP18.29■□□□□ 0.52
SEC24D-202ENST00000419654 FAM89AQ96GI7 184 aa18.28■□□□□ 0.52
SEC24D-202ENST00000419654 LIMCH1Q9UPQ0 1083 aa18.28■□□□□ 0.52
SEC24D-202ENST00000419654 SMC3Q9UQE7 1217 aa18.28■□□□□ 0.52
SEC24D-202ENST00000419654 CHMP3Q9Y3E7 222 aa18.28■□□□□ 0.52
SEC24D-202ENST00000419654 ATRNO75882 1429 aa18.28■□□□□ 0.52
SEC24D-202ENST00000419654 MBD3O95983 291 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms