RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 TRIM28Q13263 835 aaKnown RBP13.49□□□□□ -0.25
RFC1-203ENST00000418436 G2E3Q7L622 706 aa13.49□□□□□ -0.25
RFC1-203ENST00000418436 PPP1R42Q7Z4L9 355 aa13.49□□□□□ -0.25
RFC1-203ENST00000418436 C2CD5Q86YS7 1000 aa13.49□□□□□ -0.25
RFC1-203ENST00000418436 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.49□□□□□ -0.25
RFC1-203ENST00000418436 PIM2Q9P1W9 311 aa13.49□□□□□ -0.25
RFC1-203ENST00000418436 STK24Q9Y6E0 443 aa13.49□□□□□ -0.25
RFC1-203ENST00000418436 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
RFC1-203ENST00000418436 TNRC6CQ9HCJ0 1690 aaKnown RBP13.49□□□□□ -0.25
RFC1-203ENST00000418436 RNF123Q5XPI4 1314 aa13.48□□□□□ -0.25
RFC1-203ENST00000418436 FAM177BA6PVY3 158 aa13.48□□□□□ -0.25
RFC1-203ENST00000418436 H0YIN7 160 aa13.48□□□□□ -0.25
RFC1-203ENST00000418436 NPHP1O15259 732 aa13.48□□□□□ -0.25
RFC1-203ENST00000418436 GRIN3BO60391 1043 aa13.48□□□□□ -0.25
RFC1-203ENST00000418436 DDX58O95786 925 aaKnown RBP13.48□□□□□ -0.25
RFC1-203ENST00000418436 KSR2Q6VAB6 950 aa13.48□□□□□ -0.25
RFC1-203ENST00000418436 RIC3Q7Z5B4 369 aa13.48□□□□□ -0.25
RFC1-203ENST00000418436 ABCC12Q96J65 1359 aa13.47□□□□□ -0.25
RFC1-203ENST00000418436 GTF2E1P29083 439 aaPredicted RBP13.47□□□□□ -0.25
RFC1-203ENST00000418436 HNRNPUQ00839 825 aaKnown RBP eCLIP13.47□□□□□ -0.25
RFC1-203ENST00000418436 ERFEQ4G0M1 354 aa13.47□□□□□ -0.25
RFC1-203ENST00000418436 SLC10A5Q5PT55 438 aa13.47□□□□□ -0.25
RFC1-203ENST00000418436 C3orf67Q6ZVT6 689 aa13.47□□□□□ -0.25
RFC1-203ENST00000418436 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
RFC1-203ENST00000418436 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
RFC1-203ENST00000418436 UTP14AQ9BVJ6 771 aaKnown RBP13.47□□□□□ -0.25
RFC1-203ENST00000418436 UTRNP46939 3433 aa13.47□□□□□ -0.25
RFC1-203ENST00000418436 ADCY9O60503 1353 aa13.46□□□□□ -0.25
RFC1-203ENST00000418436 LAMB2P55268 1798 aa13.46□□□□□ -0.25
RFC1-203ENST00000418436 PI4KAP2A4QPH2 592 aa13.46□□□□□ -0.25
RFC1-203ENST00000418436 SRGNP10124 158 aa13.46□□□□□ -0.25
RFC1-203ENST00000418436 FLIIQ13045 1269 aa13.46□□□□□ -0.25
RFC1-203ENST00000418436 DALRD3Q5D0E6 543 aaKnown RBP13.46□□□□□ -0.25
RFC1-203ENST00000418436 PI4KAP1Q8N8J0 262 aa13.46□□□□□ -0.25
RFC1-203ENST00000418436 ZNF428Q96B54 188 aa13.46□□□□□ -0.25
RFC1-203ENST00000418436 WWC3Q9ULE0 1092 aa13.46□□□□□ -0.25
RFC1-203ENST00000418436 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
RFC1-203ENST00000418436 MAP3K2Q9Y2U5 619 aa13.46□□□□□ -0.25
RFC1-203ENST00000418436 CACNA1SQ13698 1873 aa13.46□□□□□ -0.26
RFC1-203ENST00000418436 DDX60Q8IY21 1712 aaKnown RBP13.45□□□□□ -0.26
RFC1-203ENST00000418436 ATP5J2-PTCD1G3V325 749 aa13.45□□□□□ -0.26
RFC1-203ENST00000418436 CRY2Q49AN0 593 aa13.45□□□□□ -0.26
RFC1-203ENST00000418436 STYK1Q6J9G0 422 aa13.45□□□□□ -0.26
RFC1-203ENST00000418436 TTLL6Q8N841 843 aa13.45□□□□□ -0.26
RFC1-203ENST00000418436 BOLA1Q9Y3E2 137 aa13.45□□□□□ -0.26
RFC1-203ENST00000418436 SLX4Q8IY92 1834 aa13.44□□□□□ -0.26
RFC1-203ENST00000418436 CT47B1P0C2W7 299 aaPredicted RBP13.44□□□□□ -0.26
RFC1-203ENST00000418436 NPR1P16066 1061 aa13.44□□□□□ -0.26
RFC1-203ENST00000418436 MASTLQ96GX5 879 aa13.44□□□□□ -0.26
RFC1-203ENST00000418436 MYD88Q99836 296 aa13.44□□□□□ -0.26
RFC1-203ENST00000418436 TRMT112Q9UI30 125 aaKnown RBP13.44□□□□□ -0.26
RFC1-203ENST00000418436 ZBED9Q6R2W3 1325 aa13.43□□□□□ -0.26
RFC1-203ENST00000418436 SH3TC1Q8TE82 1336 aa13.43□□□□□ -0.26
RFC1-203ENST00000418436 IGKV5-2P06315 115 aa13.43□□□□□ -0.26
RFC1-203ENST00000418436 FKBP5Q13451 457 aaPredicted RBP13.43□□□□□ -0.26
RFC1-203ENST00000418436 SYNE4Q8N205 404 aa13.43□□□□□ -0.26
RFC1-203ENST00000418436 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
RFC1-203ENST00000418436 CCDC191Q8NCU4 936 aa13.43□□□□□ -0.26
RFC1-203ENST00000418436 CNKSR1Q969H4 720 aa13.43□□□□□ -0.26
RFC1-203ENST00000418436 ZNF622Q969S3 477 aaKnown RBP eCLIP13.43□□□□□ -0.263e-8■■□□□ 12.8
RFC1-203ENST00000418436 G3V3G9 751 aa13.42□□□□□ -0.26
RFC1-203ENST00000418436 HOXA10P31260 410 aaPredicted RBP13.42□□□□□ -0.26
RFC1-203ENST00000418436 ALDH1L2Q3SY69 923 aa13.42□□□□□ -0.26
RFC1-203ENST00000418436 DNAAF4Q8WXU2 420 aa13.42□□□□□ -0.26
RFC1-203ENST00000418436 SSH1Q8WYL5 1049 aa13.42□□□□□ -0.26
RFC1-203ENST00000418436 MS4A4AQ96JQ5 239 aa13.42□□□□□ -0.26
RFC1-203ENST00000418436 NLRP3Q96P20 1036 aa13.42□□□□□ -0.26
RFC1-203ENST00000418436 NEXNQ0ZGT2 675 aa13.41□□□□□ -0.26
RFC1-203ENST00000418436 ZBTB38Q8NAP3 1195 aaPredicted RBP13.41□□□□□ -0.26
RFC1-203ENST00000418436 FAM89AQ96GI7 184 aa13.41□□□□□ -0.26
RFC1-203ENST00000418436 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
RFC1-203ENST00000418436 SBF1O95248 1867 aa13.41□□□□□ -0.26
RFC1-203ENST00000418436 FER1L6Q2WGJ9 1857 aa13.41□□□□□ -0.26
RFC1-203ENST00000418436 NEURL1BA8MQ27 555 aa13.4□□□□□ -0.26
RFC1-203ENST00000418436 PCCAP05165 728 aaPredicted RBP13.4□□□□□ -0.26
RFC1-203ENST00000418436 HCLS1P14317 486 aaPredicted RBP13.4□□□□□ -0.26
RFC1-203ENST00000418436 ALDH1B1P30837 517 aa13.4□□□□□ -0.26
RFC1-203ENST00000418436 PRPF40BQ6NWY9 871 aaKnown RBP13.4□□□□□ -0.26
RFC1-203ENST00000418436 C7orf43Q8WVR3 580 aa13.4□□□□□ -0.26
RFC1-203ENST00000418436 CRAMP1Q96RY5 1269 aa13.4□□□□□ -0.26
RFC1-203ENST00000418436 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
RFC1-203ENST00000418436 CWF19L2Q2TBE0 894 aaKnown RBP13.39□□□□□ -0.27
RFC1-203ENST00000418436 LCE2DQ5TA82 110 aaPredicted RBP13.39□□□□□ -0.27
RFC1-203ENST00000418436 ARHGAP27Q6ZUM4 889 aa13.39□□□□□ -0.27
RFC1-203ENST00000418436 LINS1Q8NG48 757 aa13.39□□□□□ -0.27
RFC1-203ENST00000418436 TMEM121BQ9BXQ6 578 aaPredicted RBP13.39□□□□□ -0.27
RFC1-203ENST00000418436 PTPRCP08575 1304 aa13.39□□□□□ -0.27
RFC1-203ENST00000418436 CDHR2Q9BYE9 1310 aa13.39□□□□□ -0.27
RFC1-203ENST00000418436 F6X3S4 739 aa13.38□□□□□ -0.27
RFC1-203ENST00000418436 IRS4O14654 1257 aaPredicted RBP13.38□□□□□ -0.27
RFC1-203ENST00000418436 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
RFC1-203ENST00000418436 BEND3Q5T5X7 828 aa13.38□□□□□ -0.27
RFC1-203ENST00000418436 FBXO22Q8NEZ5 403 aa13.38□□□□□ -0.27
RFC1-203ENST00000418436 RPGRQ92834 1020 aaKnown RBP13.38□□□□□ -0.27
RFC1-203ENST00000418436 RBM17Q96I25 401 aaKnown RBP13.38□□□□□ -0.27
RFC1-203ENST00000418436 MYH3P11055 1940 aa13.38□□□□□ -0.27
RFC1-203ENST00000418436 TAF1P21675 1872 aa13.38□□□□□ -0.27
RFC1-203ENST00000418436 CCDC88AQ3V6T2 1871 aa13.38□□□□□ -0.27
RFC1-203ENST00000418436 H7C1W4 665 aa13.37□□□□□ -0.27
RFC1-203ENST00000418436 C21orf2O43822 256 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms