RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 MYH3P11055 1940 aa20.1■□□□□ 0.81
ACTB-202ENST00000414620 BBOX1O75936 387 aa20.09■□□□□ 0.81
ACTB-202ENST00000414620 MPNDQ8N594 471 aa20.09■□□□□ 0.81
ACTB-202ENST00000414620 TSPYL6Q8N831 410 aa20.09■□□□□ 0.81
ACTB-202ENST00000414620 MRS2Q9HD23 443 aa20.09■□□□□ 0.81
ACTB-202ENST00000414620 LMOD1P29536 600 aaPredicted RBP20.08■□□□□ 0.81
ACTB-202ENST00000414620 SUPT20HQ8NEM7 779 aa20.08■□□□□ 0.81
ACTB-202ENST00000414620 MKRN1Q9UHC7 482 aaKnown RBP20.08■□□□□ 0.81
ACTB-202ENST00000414620 TRPM7Q96QT4 1865 aa20.07■□□□□ 0.8
ACTB-202ENST00000414620 PASKQ96RG2 1323 aa20.07■□□□□ 0.8
ACTB-202ENST00000414620 ZNF316A6NFI3 1004 aaPredicted RBP20.07■□□□□ 0.8
ACTB-202ENST00000414620 IRS4O14654 1257 aaPredicted RBP20.07■□□□□ 0.8
ACTB-202ENST00000414620 SCNN1DP51172 638 aa20.07■□□□□ 0.8
ACTB-202ENST00000414620 MAP1SQ66K74 1059 aaPredicted RBP20.07■□□□□ 0.8
ACTB-202ENST00000414620 CELF1Q92879 486 aaKnown RBP20.07■□□□□ 0.8
ACTB-202ENST00000414620 RTFDC1Q9BY42 306 aaPredicted RBP20.07■□□□□ 0.8
ACTB-202ENST00000414620 CREBZFQ9NS37 354 aa20.07■□□□□ 0.8
ACTB-202ENST00000414620 ANP32CO43423 234 aa20.06■□□□□ 0.8
ACTB-202ENST00000414620 EPS15P42566 896 aa20.06■□□□□ 0.8
ACTB-202ENST00000414620 IFFO2Q5TF58 517 aa20.06■□□□□ 0.8
ACTB-202ENST00000414620 CCDC30Q5VVM6 783 aa20.06■□□□□ 0.8
ACTB-202ENST00000414620 PNMA8AQ86V59 439 aaPredicted RBP20.06■□□□□ 0.8
ACTB-202ENST00000414620 JARID2Q92833 1246 aaPredicted RBP20.06■□□□□ 0.8
ACTB-202ENST00000414620 ITGBL1O95965 494 aaPredicted RBP20.05■□□□□ 0.8
ACTB-202ENST00000414620 SF3B3Q15393 1217 aaKnown RBP20.05■□□□□ 0.8
ACTB-202ENST00000414620 TRIM28Q13263 835 aaKnown RBP20.04■□□□□ 0.8
ACTB-202ENST00000414620 WWC1Q8IX03 1113 aa20.04■□□□□ 0.8
ACTB-202ENST00000414620 ZNRF3Q9ULT6 936 aa20.04■□□□□ 0.8
ACTB-202ENST00000414620 SALL2Q9Y467 1007 aaPredicted RBP20.04■□□□□ 0.8
ACTB-202ENST00000414620 CACNA1FO60840 1977 aa20.04■□□□□ 0.8
ACTB-202ENST00000414620 CXCL9Q07325 125 aa20.03■□□□□ 0.8
ACTB-202ENST00000414620 KIAA2012Q0VF49 1180 aa20.03■□□□□ 0.8
ACTB-202ENST00000414620 CCDC27Q2M243 656 aa20.03■□□□□ 0.8
ACTB-202ENST00000414620 TMC4Q7Z404 712 aa20.03■□□□□ 0.8
ACTB-202ENST00000414620 CNTROBQ8N137 903 aa20.03■□□□□ 0.8
ACTB-202ENST00000414620 ZBTB38Q8NAP3 1195 aaPredicted RBP20.03■□□□□ 0.8
ACTB-202ENST00000414620 VPS33BQ9H267 617 aa20.03■□□□□ 0.8
ACTB-202ENST00000414620 RAD17O75943 681 aa20.02■□□□□ 0.8
ACTB-202ENST00000414620 DDX58O95786 925 aaKnown RBP20.02■□□□□ 0.8
ACTB-202ENST00000414620 HSPA1AP0DMV8 641 aaKnown RBP20.02■□□□□ 0.8
ACTB-202ENST00000414620 HSPA1BP0DMV9 641 aaKnown RBP20.02■□□□□ 0.8
ACTB-202ENST00000414620 CCDC85AQ96PX6 553 aaPredicted RBP20.02■□□□□ 0.8
ACTB-202ENST00000414620 METTL22Q9BUU2 404 aaPredicted RBP20.02■□□□□ 0.8
ACTB-202ENST00000414620 CWC25Q9NXE8 425 aaPredicted RBP20.02■□□□□ 0.8
ACTB-202ENST00000414620 NSFL1CQ9UNZ2 370 aaKnown RBP20.02■□□□□ 0.8
ACTB-202ENST00000414620 MAP3K2Q9Y2U5 619 aa20.02■□□□□ 0.8
ACTB-202ENST00000414620 TMEM88BA6NKF7 163 aa20.01■□□□□ 0.79
ACTB-202ENST00000414620 GPSM2P81274 684 aa20.01■□□□□ 0.79
ACTB-202ENST00000414620 TWISTNBQ3B726 338 aaPredicted RBP20.01■□□□□ 0.79
ACTB-202ENST00000414620 CIAPIN1Q6FI81 312 aa20.01■□□□□ 0.79
ACTB-202ENST00000414620 STK31Q9BXU1 1019 aa20.01■□□□□ 0.79
ACTB-202ENST00000414620 SEC31BQ9NQW1 1179 aa20.01■□□□□ 0.79
ACTB-202ENST00000414620 CNTNAP1P78357 1384 aa20■□□□□ 0.79
ACTB-202ENST00000414620 YDJCA8MPS7 323 aa20■□□□□ 0.79
ACTB-202ENST00000414620 RIMBP2O15034 1052 aa20■□□□□ 0.79
ACTB-202ENST00000414620 GMPSP49915 693 aaPredicted RBP20■□□□□ 0.79
ACTB-202ENST00000414620 CCDC191Q8NCU4 936 aa20■□□□□ 0.79
ACTB-202ENST00000414620 GPR101Q96P66 508 aaPredicted RBP20■□□□□ 0.79
ACTB-202ENST00000414620 GPRC5DQ9NZD1 345 aa20■□□□□ 0.79
ACTB-202ENST00000414620 SCN9AQ15858 1988 aa20■□□□□ 0.79
ACTB-202ENST00000414620 PI4KAP2A4QPH2 592 aa19.99■□□□□ 0.79
ACTB-202ENST00000414620 C6orf229H3BNL8 230 aa19.99■□□□□ 0.79
ACTB-202ENST00000414620 PCCAP05165 728 aaPredicted RBP19.99■□□□□ 0.79
ACTB-202ENST00000414620 FMR1Q06787 632 aaKnown RBP eCLIP19.99■□□□□ 0.791e-75■□□□□ 8.1
ACTB-202ENST00000414620 G2E3Q7L622 706 aa19.99■□□□□ 0.79
ACTB-202ENST00000414620 PI4KAP1Q8N8J0 262 aa19.99■□□□□ 0.79
ACTB-202ENST00000414620 BCL2L13Q9BXK5 485 aa19.99■□□□□ 0.79
ACTB-202ENST00000414620 DBNDD1Q9H9R9 158 aa19.99■□□□□ 0.79
ACTB-202ENST00000414620 RPS8P62241 208 aaKnown RBP19.98■□□□□ 0.79
ACTB-202ENST00000414620 WASHC4Q2M389 1173 aa19.98■□□□□ 0.79
ACTB-202ENST00000414620 KSR2Q6VAB6 950 aa19.98■□□□□ 0.79
ACTB-202ENST00000414620 USP50Q70EL3 339 aaPredicted RBP19.98■□□□□ 0.79
ACTB-202ENST00000414620 CHMP4AQ9BY43 222 aa19.98■□□□□ 0.79
ACTB-202ENST00000414620 POLLQ9UGP5 575 aa19.98■□□□□ 0.79
ACTB-202ENST00000414620 FANCIQ9NVI1 1328 aa19.98■□□□□ 0.79
ACTB-202ENST00000414620 PSME4Q14997 1843 aa19.97■□□□□ 0.79
ACTB-202ENST00000414620 PDE8AO60658 829 aa19.97■□□□□ 0.79
ACTB-202ENST00000414620 COL13A1Q5TAT6 717 aaPredicted RBP19.97■□□□□ 0.79
ACTB-202ENST00000414620 ADARB2Q9NS39 739 aaKnown RBP19.97■□□□□ 0.79
ACTB-202ENST00000414620 POLR2AP24928 1970 aaKnown RBP19.97■□□□□ 0.79
ACTB-202ENST00000414620 IL16Q14005 1332 aa19.97■□□□□ 0.79
ACTB-202ENST00000414620 SHTN1A0MZ66 631 aa19.96■□□□□ 0.79
ACTB-202ENST00000414620 IGKV5-2P06315 115 aa19.96■□□□□ 0.79
ACTB-202ENST00000414620 TNIP1Q15025 636 aa19.96■□□□□ 0.79
ACTB-202ENST00000414620 CWF19L2Q2TBE0 894 aaKnown RBP19.96■□□□□ 0.79
ACTB-202ENST00000414620 CCDC152Q4G0S7 254 aa19.96■□□□□ 0.79
ACTB-202ENST00000414620 TRAF5O00463 557 aa19.95■□□□□ 0.78
ACTB-202ENST00000414620 SLC4A2P04920 1241 aa19.95■□□□□ 0.78
ACTB-202ENST00000414620 HSP90B1P14625 803 aaKnown RBP19.95■□□□□ 0.78
ACTB-202ENST00000414620 DOK7Q18PE1 504 aa19.95■□□□□ 0.78
ACTB-202ENST00000414620 TBC1D16Q8TBP0 767 aa19.95■□□□□ 0.78
ACTB-202ENST00000414620 ABT1Q9ULW3 272 aaKnown RBP19.95■□□□□ 0.78
ACTB-202ENST00000414620 ZBTB12Q9Y330 459 aaPredicted RBP19.95■□□□□ 0.78
ACTB-202ENST00000414620 CDHR2Q9BYE9 1310 aa19.95■□□□□ 0.78
ACTB-202ENST00000414620 ECE2O60344 883 aa19.94■□□□□ 0.78
ACTB-202ENST00000414620 VEGFBP49765 207 aa19.94■□□□□ 0.78
ACTB-202ENST00000414620 NEXNQ0ZGT2 675 aa19.94■□□□□ 0.78
ACTB-202ENST00000414620 FAM9BQ8IZU0 186 aa19.94■□□□□ 0.78
ACTB-202ENST00000414620 TRPM4Q8TD43 1214 aa19.94■□□□□ 0.78
ACTB-202ENST00000414620 EYA3Q99504 573 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms