RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 TMC4Q7Z404 712 aa23.21■■□□□ 1.31
RFC4-203ENST00000411792 JARID2Q92833 1246 aaPredicted RBP23.21■■□□□ 1.31
RFC4-203ENST00000411792 CDHR2Q9BYE9 1310 aa23.21■■□□□ 1.31
RFC4-203ENST00000411792 CACNA1FO60840 1977 aa23.2■■□□□ 1.3
RFC4-203ENST00000411792 GLTPD2A6NH11 291 aa23.2■■□□□ 1.3
RFC4-203ENST00000411792 F6X3S4 739 aa23.2■■□□□ 1.3
RFC4-203ENST00000411792 TOMM70O94826 608 aa23.2■■□□□ 1.3
RFC4-203ENST00000411792 ZNF277Q9NRM2 450 aaPredicted RBP23.2■■□□□ 1.3
RFC4-203ENST00000411792 UBE3BQ7Z3V4 1068 aa23.19■■□□□ 1.3
RFC4-203ENST00000411792 TRMT2AQ8IZ69 625 aaKnown RBP23.19■■□□□ 1.3
RFC4-203ENST00000411792 PSMD1Q99460 953 aa23.19■■□□□ 1.3
RFC4-203ENST00000411792 DICER1Q9UPY3 1922 aaKnown RBP23.18■■□□□ 1.3
RFC4-203ENST00000411792 GCKRQ14397 625 aa23.18■■□□□ 1.3
RFC4-203ENST00000411792 SLC4A10Q6U841 1118 aa23.18■■□□□ 1.3
RFC4-203ENST00000411792 SP8Q8IXZ3 490 aa23.18■■□□□ 1.3
RFC4-203ENST00000411792 DDX60Q8IY21 1712 aaKnown RBP23.18■■□□□ 1.3
RFC4-203ENST00000411792 IARSP41252 1262 aaKnown RBP23.17■■□□□ 1.3
RFC4-203ENST00000411792 ALDH1L2Q3SY69 923 aa23.17■■□□□ 1.3
RFC4-203ENST00000411792 MRPL50Q8N5N7 158 aaKnown RBP23.17■■□□□ 1.3
RFC4-203ENST00000411792 SSH1Q8WYL5 1049 aa23.17■■□□□ 1.3
RFC4-203ENST00000411792 SMC4Q9NTJ3 1288 aa23.17■■□□□ 1.3
RFC4-203ENST00000411792 LAMB2P55268 1798 aa23.17■■□□□ 1.3
RFC4-203ENST00000411792 PTPRCP08575 1304 aa23.16■■□□□ 1.3
RFC4-203ENST00000411792 CTSWP56202 376 aa23.16■■□□□ 1.3
RFC4-203ENST00000411792 SUPT20HQ8NEM7 779 aa23.16■■□□□ 1.3
RFC4-203ENST00000411792 BCL2L13Q9BXK5 485 aa23.16■■□□□ 1.3
RFC4-203ENST00000411792 H7C1W4 665 aa23.15■■□□□ 1.3
RFC4-203ENST00000411792 BEND3Q5T5X7 828 aa23.15■■□□□ 1.3
RFC4-203ENST00000411792 DPP8Q6V1X1 898 aaPredicted RBP23.15■■□□□ 1.3
RFC4-203ENST00000411792 MPNDQ8N594 471 aa23.15■■□□□ 1.3
RFC4-203ENST00000411792 JDP2Q8WYK2 163 aa23.15■■□□□ 1.3
RFC4-203ENST00000411792 CELF1Q92879 486 aaKnown RBP23.15■■□□□ 1.3
RFC4-203ENST00000411792 CCDC85AQ96PX6 553 aaPredicted RBP23.15■■□□□ 1.3
RFC4-203ENST00000411792 VEGFAP15692 232 aaPredicted RBP23.14■■□□□ 1.29
RFC4-203ENST00000411792 RPS8P62241 208 aaKnown RBP23.14■■□□□ 1.29
RFC4-203ENST00000411792 HSPA6P17066 643 aa23.13■■□□□ 1.29
RFC4-203ENST00000411792 CDC5LQ99459 802 aaKnown RBP23.13■■□□□ 1.29
RFC4-203ENST00000411792 SRCIN1Q9C0H9 1055 aa23.13■■□□□ 1.29
RFC4-203ENST00000411792 SNED1Q8TER0 1413 aa23.13■■□□□ 1.29
RFC4-203ENST00000411792 ALDH1L1O75891 902 aa23.12■■□□□ 1.29
RFC4-203ENST00000411792 LARGE2Q8N3Y3 721 aa23.12■■□□□ 1.29
RFC4-203ENST00000411792 RBM46Q8TBY0 533 aaKnown RBP23.12■■□□□ 1.29
RFC4-203ENST00000411792 C9orf78Q9NZ63 289 aaPredicted RBP23.12■■□□□ 1.29
RFC4-203ENST00000411792 PPIP5K2O43314 1243 aa23.11■■□□□ 1.29
RFC4-203ENST00000411792 DDNO94850 711 aaPredicted RBP23.11■■□□□ 1.29
RFC4-203ENST00000411792 ANKRD18AQ8IVF6 992 aa23.11■■□□□ 1.29
RFC4-203ENST00000411792 SEC31BQ9NQW1 1179 aa23.11■■□□□ 1.29
RFC4-203ENST00000411792 SLC51AQ86UW1 340 aa23.1■■□□□ 1.29
RFC4-203ENST00000411792 TTLL11Q8NHH1 800 aa23.1■■□□□ 1.29
RFC4-203ENST00000411792 PLA2G12BQ9BX93 195 aa23.1■■□□□ 1.29
RFC4-203ENST00000411792 VPS33BQ9H267 617 aa23.1■■□□□ 1.29
RFC4-203ENST00000411792 GRM8O00222 908 aa23.09■■□□□ 1.29
RFC4-203ENST00000411792 NIM1KQ8IY84 436 aa23.09■■□□□ 1.29
RFC4-203ENST00000411792 RTFDC1Q9BY42 306 aaPredicted RBP23.09■■□□□ 1.29
RFC4-203ENST00000411792 NSFL1CQ9UNZ2 370 aaKnown RBP23.09■■□□□ 1.29
RFC4-203ENST00000411792 EIF6P56537 245 aaKnown RBP23.08■■□□□ 1.29
RFC4-203ENST00000411792 GREM2Q9H772 168 aa23.08■■□□□ 1.29
RFC4-203ENST00000411792 ZBED9Q6R2W3 1325 aa23.08■■□□□ 1.28
RFC4-203ENST00000411792 RTL9Q8NET4 1388 aa23.07■■□□□ 1.28
RFC4-203ENST00000411792 CASP7P55210 303 aa23.07■■□□□ 1.28
RFC4-203ENST00000411792 AOC3Q16853 763 aa23.07■■□□□ 1.28
RFC4-203ENST00000411792 SMC1BQ8NDV3 1235 aa23.07■■□□□ 1.28
RFC4-203ENST00000411792 WDR90Q96KV7 1748 aa23.06■■□□□ 1.28
RFC4-203ENST00000411792 C6orf229H3BNL8 230 aa23.06■■□□□ 1.28
RFC4-203ENST00000411792 IGHMBP2P38935 993 aaKnown RBP23.06■■□□□ 1.28
RFC4-203ENST00000411792 FSTL1Q12841 308 aa23.06■■□□□ 1.28
RFC4-203ENST00000411792 ANKIB1Q9P2G1 1089 aa23.06■■□□□ 1.28
RFC4-203ENST00000411792 CHMP3Q9Y3E7 222 aa23.06■■□□□ 1.28
RFC4-203ENST00000411792 KIF16BQ96L93 1317 aa23.06■■□□□ 1.28
RFC4-203ENST00000411792 ZNF541Q9H0D2 1346 aa23.06■■□□□ 1.28
RFC4-203ENST00000411792 TAF1P21675 1872 aa23.05■■□□□ 1.28
RFC4-203ENST00000411792 POTECB2RU33 542 aa23.05■■□□□ 1.28
RFC4-203ENST00000411792 FZD9O00144 591 aa23.05■■□□□ 1.28
RFC4-203ENST00000411792 RARSP54136 660 aaKnown RBP23.05■■□□□ 1.28
RFC4-203ENST00000411792 ITGA6P23229 1130 aa23.04■■□□□ 1.28
RFC4-203ENST00000411792 BRPF1P55201 1214 aaPredicted RBP23.04■■□□□ 1.28
RFC4-203ENST00000411792 GPSM2P81274 684 aa23.04■■□□□ 1.28
RFC4-203ENST00000411792 FAM161AQ3B820 660 aa23.04■■□□□ 1.28
RFC4-203ENST00000411792 EYA3Q99504 573 aa23.04■■□□□ 1.28
RFC4-203ENST00000411792 API5Q9BZZ5 524 aaKnown RBP23.04■■□□□ 1.28
RFC4-203ENST00000411792 NOB1Q9ULX3 412 aaKnown RBP23.04■■□□□ 1.28
RFC4-203ENST00000411792 IQCA1LA6NCM1 817 aa23.03■■□□□ 1.28
RFC4-203ENST00000411792 APLP1P51693 650 aa23.03■■□□□ 1.28
RFC4-203ENST00000411792 KIAA2012Q0VF49 1180 aa23.03■■□□□ 1.28
RFC4-203ENST00000411792 MPHOSPH8Q99549 860 aa23.03■■□□□ 1.28
RFC4-203ENST00000411792 LRRC37AA6NMS7 1700 aa23.02■■□□□ 1.28
RFC4-203ENST00000411792 ANKRD18BA2A2Z9 1011 aa23.02■■□□□ 1.28
RFC4-203ENST00000411792 CSF1RP07333 972 aa23.02■■□□□ 1.28
RFC4-203ENST00000411792 WASHC4Q2M389 1173 aa23.02■■□□□ 1.28
RFC4-203ENST00000411792 BSDC1Q9NW68 430 aaPredicted RBP23.02■■□□□ 1.28
RFC4-203ENST00000411792 GGA1Q9UJY5 639 aa23.02■■□□□ 1.28
RFC4-203ENST00000411792 GJA3Q9Y6H8 435 aa23.02■■□□□ 1.28
RFC4-203ENST00000411792 UFL1O94874 794 aa23.01■■□□□ 1.27
RFC4-203ENST00000411792 IFIT5Q13325 482 aaKnown RBP23.01■■□□□ 1.27
RFC4-203ENST00000411792 GPC2Q8N158 579 aa23.01■■□□□ 1.27
RFC4-203ENST00000411792 PODXL2Q9NZ53 605 aa23.01■■□□□ 1.27
RFC4-203ENST00000411792 ZNRF3Q9ULT6 936 aa23.01■■□□□ 1.27
RFC4-203ENST00000411792 XDHP47989 1333 aa23.01■■□□□ 1.27
RFC4-203ENST00000411792 CCT4P50991 539 aaKnown RBP23■■□□□ 1.27
RFC4-203ENST00000411792 TAF7LQ5H9L4 462 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms