RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 CIAPIN1Q6FI81 312 aa21.86■■□□□ 1.09
MRPL55-220ENST00000411464 CYP4F22Q6NT55 531 aa21.86■■□□□ 1.09
MRPL55-220ENST00000411464 BCL2L13Q9BXK5 485 aa21.86■■□□□ 1.09
MRPL55-220ENST00000411464 DLG5Q8TDM6 1919 aa21.86■■□□□ 1.09
MRPL55-220ENST00000411464 KIAA2012Q0VF49 1180 aa21.85■■□□□ 1.09
MRPL55-220ENST00000411464 GRAPQ13588 217 aa21.85■■□□□ 1.09
MRPL55-220ENST00000411464 NEUROD2Q15784 382 aa21.85■■□□□ 1.09
MRPL55-220ENST00000411464 GRAPLQ8TC17 118 aaPredicted RBP21.85■■□□□ 1.09
MRPL55-220ENST00000411464 TLL2Q9Y6L7 1015 aa21.85■■□□□ 1.09
MRPL55-220ENST00000411464 RAD17O75943 681 aa21.84■■□□□ 1.09
MRPL55-220ENST00000411464 LTBP1Q14766 1721 aa21.83■■□□□ 1.09
MRPL55-220ENST00000411464 CELF2O95319 508 aaKnown RBP21.83■■□□□ 1.09
MRPL55-220ENST00000411464 TMC4Q7Z404 712 aa21.83■■□□□ 1.09
MRPL55-220ENST00000411464 LAS1LQ9Y4W2 734 aaKnown RBP21.83■■□□□ 1.09
MRPL55-220ENST00000411464 CDHR2Q9BYE9 1310 aa21.82■■□□□ 1.08
MRPL55-220ENST00000411464 CHL1O00533 1208 aa21.82■■□□□ 1.08
MRPL55-220ENST00000411464 ZC3H15Q8WU90 426 aaKnown RBP21.82■■□□□ 1.08
MRPL55-220ENST00000411464 PGAP2Q9UHJ9 254 aa21.82■■□□□ 1.08
MRPL55-220ENST00000411464 MAP2K2P36507 400 aa21.81■■□□□ 1.08
MRPL55-220ENST00000411464 KRT24Q2M2I5 525 aa21.81■■□□□ 1.08
MRPL55-220ENST00000411464 CCDC146Q8IYE0 955 aa21.81■■□□□ 1.08
MRPL55-220ENST00000411464 ABHD8Q96I13 439 aa21.81■■□□□ 1.08
MRPL55-220ENST00000411464 GLIS2Q9BZE0 524 aaPredicted RBP21.81■■□□□ 1.08
MRPL55-220ENST00000411464 SAPCD2Q86UD0 394 aa21.8■■□□□ 1.08
MRPL55-220ENST00000411464 ZNF428Q96B54 188 aa21.8■■□□□ 1.08
MRPL55-220ENST00000411464 CHPF2Q9P2E5 772 aa21.8■■□□□ 1.08
MRPL55-220ENST00000411464 CNOT7Q9UIV1 285 aaKnown RBP21.8■■□□□ 1.08
MRPL55-220ENST00000411464 H7C1D1 291 aa21.79■■□□□ 1.08
MRPL55-220ENST00000411464 HDGFL1Q5TGJ6 251 aa21.79■■□□□ 1.08
MRPL55-220ENST00000411464 ANKRD13DQ6ZTN6 518 aa21.79■■□□□ 1.08
MRPL55-220ENST00000411464 CDC37L1Q7L3B6 337 aa21.79■■□□□ 1.08
MRPL55-220ENST00000411464 PLBD2Q8NHP8 589 aa21.79■■□□□ 1.08
MRPL55-220ENST00000411464 AOC2O75106 756 aa21.78■■□□□ 1.08
MRPL55-220ENST00000411464 HIRAP54198 1017 aaPredicted RBP21.78■■□□□ 1.08
MRPL55-220ENST00000411464 WASHC4Q2M389 1173 aa21.78■■□□□ 1.08
MRPL55-220ENST00000411464 HHIPL1Q96JK4 782 aa21.78■■□□□ 1.08
MRPL55-220ENST00000411464 ZNF408Q9H9D4 720 aa21.78■■□□□ 1.08
MRPL55-220ENST00000411464 DBF4Q9UBU7 674 aaPredicted RBP21.78■■□□□ 1.08
MRPL55-220ENST00000411464 NSFL1CQ9UNZ2 370 aaKnown RBP21.78■■□□□ 1.08
MRPL55-220ENST00000411464 YDJCA8MPS7 323 aa21.77■■□□□ 1.08
MRPL55-220ENST00000411464 RUNDC1Q96C34 613 aa21.77■■□□□ 1.08
MRPL55-220ENST00000411464 FAM89AQ96GI7 184 aa21.77■■□□□ 1.08
MRPL55-220ENST00000411464 HOXB7P09629 217 aa21.76■■□□□ 1.07
MRPL55-220ENST00000411464 WDR43Q15061 677 aaKnown RBP eCLIP21.76■■□□□ 1.07
MRPL55-220ENST00000411464 SF3B3Q15393 1217 aaKnown RBP21.76■■□□□ 1.07
MRPL55-220ENST00000411464 TRPM4Q8TD43 1214 aa21.76■■□□□ 1.07
MRPL55-220ENST00000411464 TRIM35Q9UPQ4 493 aa21.76■■□□□ 1.07
MRPL55-220ENST00000411464 ATP5J2-PTCD1G3V325 749 aa21.75■■□□□ 1.07
MRPL55-220ENST00000411464 C6orf229H3BNL8 230 aa21.75■■□□□ 1.07
MRPL55-220ENST00000411464 CA12O43570 354 aa21.75■■□□□ 1.07
MRPL55-220ENST00000411464 MICALL2Q8IY33 904 aa21.75■■□□□ 1.07
MRPL55-220ENST00000411464 ISCA1Q9BUE6 129 aa21.75■■□□□ 1.07
MRPL55-220ENST00000411464 MYBBP1AQ9BQG0 1328 aaKnown RBP21.75■■□□□ 1.07
MRPL55-220ENST00000411464 RIMBP2O15034 1052 aa21.74■■□□□ 1.07
MRPL55-220ENST00000411464 DPF2Q92785 391 aa21.74■■□□□ 1.07
MRPL55-220ENST00000411464 HYPKQ9NX55 129 aa21.74■■□□□ 1.07
MRPL55-220ENST00000411464 TSKSQ9UJT2 592 aa21.74■■□□□ 1.07
MRPL55-220ENST00000411464 ZBTB12Q9Y330 459 aaPredicted RBP21.74■■□□□ 1.07
MRPL55-220ENST00000411464 SHTN1A0MZ66 631 aa21.73■■□□□ 1.07
MRPL55-220ENST00000411464 RTL5Q5HYW3 569 aaPredicted RBP21.73■■□□□ 1.07
MRPL55-220ENST00000411464 USP48Q86UV5 1035 aa21.73■■□□□ 1.07
MRPL55-220ENST00000411464 CELF1Q92879 486 aaKnown RBP21.73■■□□□ 1.07
MRPL55-220ENST00000411464 DBNDD1Q9H9R9 158 aa21.73■■□□□ 1.07
MRPL55-220ENST00000411464 PSMD14O00487 310 aa21.72■■□□□ 1.07
MRPL55-220ENST00000411464 BRPF1P55201 1214 aaPredicted RBP21.72■■□□□ 1.07
MRPL55-220ENST00000411464 CFAP44Q96MT7 982 aa21.72■■□□□ 1.07
MRPL55-220ENST00000411464 EYA3Q99504 573 aa21.72■■□□□ 1.07
MRPL55-220ENST00000411464 CCDC85CA6NKD9 419 aa21.71■■□□□ 1.07
MRPL55-220ENST00000411464 IRS4O14654 1257 aaPredicted RBP21.71■■□□□ 1.07
MRPL55-220ENST00000411464 GPSM2P81274 684 aa21.71■■□□□ 1.07
MRPL55-220ENST00000411464 DDX10Q13206 875 aaKnown RBP21.71■■□□□ 1.07
MRPL55-220ENST00000411464 DUSP27Q5VZP5 1158 aa21.71■■□□□ 1.07
MRPL55-220ENST00000411464 SAMD7Q7Z3H4 446 aa21.71■■□□□ 1.07
MRPL55-220ENST00000411464 POLLQ9UGP5 575 aa21.71■■□□□ 1.07
MRPL55-220ENST00000411464 ADAMTS8Q9UP79 889 aa21.71■■□□□ 1.07
MRPL55-220ENST00000411464 RPS12P25398 132 aaKnown RBP21.7■■□□□ 1.06
MRPL55-220ENST00000411464 RPS8P62241 208 aaKnown RBP21.7■■□□□ 1.06
MRPL55-220ENST00000411464 TRIM28Q13263 835 aaKnown RBP21.7■■□□□ 1.06
MRPL55-220ENST00000411464 ECE2O60344 883 aa21.69■■□□□ 1.06
MRPL55-220ENST00000411464 HSP90B1P14625 803 aaKnown RBP21.69■■□□□ 1.06
MRPL55-220ENST00000411464 HUNKP57058 714 aa21.69■■□□□ 1.06
MRPL55-220ENST00000411464 NOGQ13253 232 aa21.69■■□□□ 1.06
MRPL55-220ENST00000411464 DOK7Q18PE1 504 aa21.69■■□□□ 1.06
MRPL55-220ENST00000411464 TBC1D10BQ4KMP7 808 aaPredicted RBP21.69■■□□□ 1.06
MRPL55-220ENST00000411464 RBM26Q5T8P6 1007 aaKnown RBP21.69■■□□□ 1.06
MRPL55-220ENST00000411464 KRT26Q7Z3Y9 468 aa21.69■■□□□ 1.06
MRPL55-220ENST00000411464 RIC3Q7Z5B4 369 aa21.69■■□□□ 1.06
MRPL55-220ENST00000411464 DCPSQ96C86 337 aaKnown RBP21.68■■□□□ 1.06
MRPL55-220ENST00000411464 ZC3H12CQ9C0D7 883 aaKnown RBP21.68■■□□□ 1.06
MRPL55-220ENST00000411464 THSD7BQ9C0I4 1608 aa21.68■■□□□ 1.06
MRPL55-220ENST00000411464 ANKRD36CQ5JPF3 1778 aa21.67■■□□□ 1.06
MRPL55-220ENST00000411464 G3V3G9 751 aa21.67■■□□□ 1.06
MRPL55-220ENST00000411464 GOLGA2Q08379 1002 aa21.67■■□□□ 1.06
MRPL55-220ENST00000411464 FAM161AQ3B820 660 aa21.67■■□□□ 1.06
MRPL55-220ENST00000411464 DCAF8Q5TAQ9 597 aa21.67■■□□□ 1.06
MRPL55-220ENST00000411464 ZBTB38Q8NAP3 1195 aaPredicted RBP21.67■■□□□ 1.06
MRPL55-220ENST00000411464 TBC1D16Q8TBP0 767 aa21.67■■□□□ 1.06
MRPL55-220ENST00000411464 KCNQ5Q9NR82 932 aa21.67■■□□□ 1.06
MRPL55-220ENST00000411464 MBIPQ9NS73 344 aa21.67■■□□□ 1.06
MRPL55-220ENST00000411464 DLK2Q6UY11 383 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms