RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 LMBR1LQ6UX01 489 aa25.82■■□□□ 1.72
C4orf48-202ENST00000409860 MASTLQ96GX5 879 aa25.82■■□□□ 1.72
C4orf48-202ENST00000409860 ZBTB40Q9NUA8 1239 aa25.82■■□□□ 1.72
C4orf48-202ENST00000409860 CHMP3Q9Y3E7 222 aa25.82■■□□□ 1.72
C4orf48-202ENST00000409860 ANKRD31Q8N7Z5 1873 aa25.82■■□□□ 1.72
C4orf48-202ENST00000409860 KIF13BQ9NQT8 1826 aa25.81■■□□□ 1.72
C4orf48-202ENST00000409860 CSF1RP07333 972 aa25.81■■□□□ 1.72
C4orf48-202ENST00000409860 DPEP1P16444 411 aa25.81■■□□□ 1.72
C4orf48-202ENST00000409860 IRX6P78412 446 aaPredicted RBP25.81■■□□□ 1.72
C4orf48-202ENST00000409860 RABL6Q3YEC7 729 aaPredicted RBP25.81■■□□□ 1.72
C4orf48-202ENST00000409860 ANKRD44Q8N8A2 993 aa25.81■■□□□ 1.72
C4orf48-202ENST00000409860 RBM17Q96I25 401 aaKnown RBP25.81■■□□□ 1.72
C4orf48-202ENST00000409860 CCDC85AQ96PX6 553 aaPredicted RBP25.81■■□□□ 1.72
C4orf48-202ENST00000409860 A0A0G2JLW4 131 aa25.8■■□□□ 1.72
C4orf48-202ENST00000409860 STYK1Q6J9G0 422 aa25.8■■□□□ 1.72
C4orf48-202ENST00000409860 DDX46Q7L014 1031 aaKnown RBP25.8■■□□□ 1.72
C4orf48-202ENST00000409860 ZNF622Q969S3 477 aaKnown RBP eCLIP25.8■■□□□ 1.72
C4orf48-202ENST00000409860 C1orf115Q9H7X2 142 aa25.8■■□□□ 1.72
C4orf48-202ENST00000409860 HOXA10P31260 410 aaPredicted RBP25.79■■□□□ 1.72
C4orf48-202ENST00000409860 FAM161AQ3B820 660 aa25.79■■□□□ 1.72
C4orf48-202ENST00000409860 SYT17Q9BSW7 474 aa25.79■■□□□ 1.72
C4orf48-202ENST00000409860 GREM2Q9H772 168 aa25.79■■□□□ 1.72
C4orf48-202ENST00000409860 RTL9Q8NET4 1388 aa25.79■■□□□ 1.72
C4orf48-202ENST00000409860 NEFLP07196 543 aa25.78■■□□□ 1.72
C4orf48-202ENST00000409860 NLGN2Q8NFZ4 835 aa25.78■■□□□ 1.72
C4orf48-202ENST00000409860 AAMPQ13685 434 aa25.77■■□□□ 1.72
C4orf48-202ENST00000409860 CNKSR1Q969H4 720 aa25.77■■□□□ 1.72
C4orf48-202ENST00000409860 CRAMP1Q96RY5 1269 aa25.77■■□□□ 1.72
C4orf48-202ENST00000409860 ANKRD18BA2A2Z9 1011 aa25.76■■□□□ 1.71
C4orf48-202ENST00000409860 ITGA6P23229 1130 aa25.76■■□□□ 1.71
C4orf48-202ENST00000409860 ALDH1B1P30837 517 aa25.76■■□□□ 1.71
C4orf48-202ENST00000409860 IFIT5Q13325 482 aaKnown RBP25.76■■□□□ 1.71
C4orf48-202ENST00000409860 CCDC57Q2TAC2 916 aa25.76■■□□□ 1.71
C4orf48-202ENST00000409860 EXOC6Q8TAG9 804 aa25.76■■□□□ 1.71
C4orf48-202ENST00000409860 CDC5LQ99459 802 aaKnown RBP25.76■■□□□ 1.71
C4orf48-202ENST00000409860 MTX1Q13505 466 aa25.75■■□□□ 1.71
C4orf48-202ENST00000409860 GRAPQ13588 217 aa25.75■■□□□ 1.71
C4orf48-202ENST00000409860 GRAPLQ8TC17 118 aaPredicted RBP25.75■■□□□ 1.71
C4orf48-202ENST00000409860 PIM2Q9P1W9 311 aa25.75■■□□□ 1.71
C4orf48-202ENST00000409860 COL11A2P13942 1736 aaPredicted RBP25.74■■□□□ 1.71
C4orf48-202ENST00000409860 KCNA3P22001 575 aa25.74■■□□□ 1.71
C4orf48-202ENST00000409860 SEC31BQ9NQW1 1179 aa25.74■■□□□ 1.71
C4orf48-202ENST00000409860 MYH3P11055 1940 aa25.73■■□□□ 1.71
C4orf48-202ENST00000409860 TAF7LQ5H9L4 462 aa25.73■■□□□ 1.71
C4orf48-202ENST00000409860 TTLL6Q8N841 843 aa25.73■■□□□ 1.71
C4orf48-202ENST00000409860 KIAA1551Q9HCM1 1747 aa25.72■■□□□ 1.71
C4orf48-202ENST00000409860 SRGAP3O43295 1099 aa25.72■■□□□ 1.71
C4orf48-202ENST00000409860 ATP8B2P98198 1209 aa25.72■■□□□ 1.71
C4orf48-202ENST00000409860 CEP85Q6P2H3 762 aa25.72■■□□□ 1.71
C4orf48-202ENST00000409860 ANKRD18AQ8IVF6 992 aa25.72■■□□□ 1.71
C4orf48-202ENST00000409860 IGHMBP2P38935 993 aaKnown RBP25.71■■□□□ 1.71
C4orf48-202ENST00000409860 DALRD3Q5D0E6 543 aaKnown RBP25.71■■□□□ 1.71
C4orf48-202ENST00000409860 RPAP2Q8IXW5 612 aaPredicted RBP25.71■■□□□ 1.71
C4orf48-202ENST00000409860 CELF1Q92879 486 aaKnown RBP25.71■■□□□ 1.71
C4orf48-202ENST00000409860 BBOX1O75936 387 aa25.7■■□□□ 1.7
C4orf48-202ENST00000409860 RPS8P62241 208 aaKnown RBP25.7■■□□□ 1.7
C4orf48-202ENST00000409860 PRPF40BQ6NWY9 871 aaKnown RBP25.7■■□□□ 1.7
C4orf48-202ENST00000409860 PPEF1O14829 653 aaPredicted RBP25.69■■□□□ 1.7
C4orf48-202ENST00000409860 TMC4Q7Z404 712 aa25.69■■□□□ 1.7
C4orf48-202ENST00000409860 DLEC1Q9Y238 1755 aa25.69■■□□□ 1.7
C4orf48-202ENST00000409860 PNMA6EA0A0J9YXQ4 647 aa25.68■■□□□ 1.7
C4orf48-202ENST00000409860 HMMRO75330 724 aa25.68■■□□□ 1.7
C4orf48-202ENST00000409860 MPHOSPH8Q99549 860 aa25.68■■□□□ 1.7
C4orf48-202ENST00000409860 WWC3Q9ULE0 1092 aa25.68■■□□□ 1.7
C4orf48-202ENST00000409860 RFX5P48382 616 aaPredicted RBP25.67■■□□□ 1.7
C4orf48-202ENST00000409860 TMX4Q9H1E5 349 aaPredicted RBP25.67■■□□□ 1.7
C4orf48-202ENST00000409860 POLA2Q14181 598 aa25.66■■□□□ 1.7
C4orf48-202ENST00000409860 SSH3Q8TE77 659 aa25.66■■□□□ 1.7
C4orf48-202ENST00000409860 ZNF594Q96JF6 807 aaPredicted RBP25.66■■□□□ 1.7
C4orf48-202ENST00000409860 BCS1LQ9Y276 419 aa25.66■■□□□ 1.7
C4orf48-202ENST00000409860 BSDC1Q9NW68 430 aaPredicted RBP25.65■■□□□ 1.7
C4orf48-202ENST00000409860 PTPN12Q05209 780 aaKnown RBP25.64■■□□□ 1.7
C4orf48-202ENST00000409860 LDHAL6AQ6ZMR3 332 aa25.64■■□□□ 1.7
C4orf48-202ENST00000409860 KLHDC4Q8TBB5 520 aa25.64■■□□□ 1.7
C4orf48-202ENST00000409860 COPRSQ9NQ92 184 aa25.64■■□□□ 1.7
C4orf48-202ENST00000409860 PCDHB15Q9Y5E8 787 aa25.64■■□□□ 1.7
C4orf48-202ENST00000409860 SOGA3Q5TF21 947 aa25.63■■□□□ 1.69
C4orf48-202ENST00000409860 CNNM1Q9NRU3 951 aa25.63■■□□□ 1.69
C4orf48-202ENST00000409860 ATP6V0A2Q9Y487 856 aa25.63■■□□□ 1.69
C4orf48-202ENST00000409860 CC2D2BQ6DHV5 1058 aa25.62■■□□□ 1.69
C4orf48-202ENST00000409860 SIRT2Q8IXJ6 389 aa25.62■■□□□ 1.69
C4orf48-202ENST00000409860 SP8Q8IXZ3 490 aa25.62■■□□□ 1.69
C4orf48-202ENST00000409860 ZNF219Q9P2Y4 722 aaPredicted RBP25.62■■□□□ 1.69
C4orf48-202ENST00000409860 FBXO3Q9UK99 471 aa25.62■■□□□ 1.69
C4orf48-202ENST00000409860 PA2G4Q9UQ80 394 aaKnown RBP25.62■■□□□ 1.69
C4orf48-202ENST00000409860 COL4A1P02462 1669 aa25.61■■□□□ 1.69
C4orf48-202ENST00000409860 EYA2O00167 538 aa25.61■■□□□ 1.69
C4orf48-202ENST00000409860 C21orf2O43822 256 aa25.61■■□□□ 1.69
C4orf48-202ENST00000409860 PELP1Q8IZL8 1130 aaKnown RBP25.61■■□□□ 1.69
C4orf48-202ENST00000409860 C7orf43Q8WVR3 580 aa25.6■■□□□ 1.69
C4orf48-202ENST00000409860 SIL1Q9H173 461 aa25.6■■□□□ 1.69
C4orf48-202ENST00000409860 BRCA1P38398 1863 aaKnown RBP25.6■■□□□ 1.69
C4orf48-202ENST00000409860 SLX4Q8IY92 1834 aa25.59■■□□□ 1.69
C4orf48-202ENST00000409860 CIAO1O76071 339 aa25.59■■□□□ 1.69
C4orf48-202ENST00000409860 CCDC93Q567U6 631 aa25.59■■□□□ 1.69
C4orf48-202ENST00000409860 PUS3Q9BZE2 481 aaKnown RBP25.59■■□□□ 1.69
C4orf48-202ENST00000409860 SURF6O75683 361 aaKnown RBP25.58■■□□□ 1.69
C4orf48-202ENST00000409860 G3BP1Q13283 466 aaKnown RBP eCLIP25.58■■□□□ 1.69
C4orf48-202ENST00000409860 GRIPAP1Q4V328 841 aa25.58■■□□□ 1.69
C4orf48-202ENST00000409860 LRRC24Q50LG9 513 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms