RNA–Protein interactions for RNA: ENST00000409760.1

VAMP8-202, Transcript of vesicle associated membrane protein 8, humanhuman

TSL 3 BASIC

Gene VAMP8, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-202ENST00000409760 EAPPQ56P03 285 aaPredicted RBP12.29□□□□□ -0.44
VAMP8-202ENST00000409760 JDP2Q8WYK2 163 aa12.29□□□□□ -0.44
VAMP8-202ENST00000409760 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
VAMP8-202ENST00000409760 RTFDC1Q9BY42 306 aaPredicted RBP12.29□□□□□ -0.44
VAMP8-202ENST00000409760 ATP6V0A2Q9Y487 856 aa12.29□□□□□ -0.44
VAMP8-202ENST00000409760 TCERG1O14776 1098 aaKnown RBP12.28□□□□□ -0.44
VAMP8-202ENST00000409760 HCLS1P14317 486 aaPredicted RBP12.28□□□□□ -0.44
VAMP8-202ENST00000409760 EPS15P42566 896 aa12.28□□□□□ -0.44
VAMP8-202ENST00000409760 MAP1SQ66K74 1059 aaPredicted RBP12.28□□□□□ -0.44
VAMP8-202ENST00000409760 RIC3Q7Z5B4 369 aa12.28□□□□□ -0.44
VAMP8-202ENST00000409760 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
VAMP8-202ENST00000409760 LARGE2Q8N3Y3 721 aa12.28□□□□□ -0.44
VAMP8-202ENST00000409760 ZNF521Q96K83 1311 aa12.28□□□□□ -0.44
VAMP8-202ENST00000409760 LRRC37AA6NMS7 1700 aa12.28□□□□□ -0.44
VAMP8-202ENST00000409760 DDX60Q8IY21 1712 aaKnown RBP12.28□□□□□ -0.44
VAMP8-202ENST00000409760 TMEM88BA6NKF7 163 aa12.27□□□□□ -0.45
VAMP8-202ENST00000409760 E9PSI1 815 aa12.27□□□□□ -0.45
VAMP8-202ENST00000409760 EIF6P56537 245 aaKnown RBP12.27□□□□□ -0.45
VAMP8-202ENST00000409760 CNTROBQ8N137 903 aa12.27□□□□□ -0.45
VAMP8-202ENST00000409760 TSPYL6Q8N831 410 aa12.27□□□□□ -0.45
VAMP8-202ENST00000409760 RASSF10A6NK89 507 aa12.26□□□□□ -0.45
VAMP8-202ENST00000409760 VEGFBP49765 207 aa12.26□□□□□ -0.45
VAMP8-202ENST00000409760 FMR1Q06787 632 aaKnown RBP eCLIP12.26□□□□□ -0.45
VAMP8-202ENST00000409760 AOC3Q16853 763 aa12.26□□□□□ -0.45
VAMP8-202ENST00000409760 SP8Q8IXZ3 490 aa12.26□□□□□ -0.45
VAMP8-202ENST00000409760 TNS4Q8IZW8 715 aa12.26□□□□□ -0.45
VAMP8-202ENST00000409760 ZNF428Q96B54 188 aa12.26□□□□□ -0.45
VAMP8-202ENST00000409760 ISCA1Q9BUE6 129 aa12.26□□□□□ -0.45
VAMP8-202ENST00000409760 VPS33BQ9H267 617 aa12.26□□□□□ -0.45
VAMP8-202ENST00000409760 GJA3Q9Y6H8 435 aa12.26□□□□□ -0.45
VAMP8-202ENST00000409760 SH3TC1Q8TE82 1336 aa12.26□□□□□ -0.45
VAMP8-202ENST00000409760 THSD7BQ9C0I4 1608 aa12.26□□□□□ -0.45
VAMP8-202ENST00000409760 TAF1P21675 1872 aa12.25□□□□□ -0.45
VAMP8-202ENST00000409760 FOXN1O15353 648 aa12.25□□□□□ -0.45
VAMP8-202ENST00000409760 PPIP5K2O43314 1243 aa12.25□□□□□ -0.45
VAMP8-202ENST00000409760 VAMP4O75379 141 aa12.25□□□□□ -0.45
VAMP8-202ENST00000409760 BBOX1O75936 387 aa12.25□□□□□ -0.45
VAMP8-202ENST00000409760 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
VAMP8-202ENST00000409760 CXCL9Q07325 125 aa12.25□□□□□ -0.45
VAMP8-202ENST00000409760 NEXNQ0ZGT2 675 aa12.25□□□□□ -0.45
VAMP8-202ENST00000409760 KSR2Q6VAB6 950 aa12.25□□□□□ -0.45
VAMP8-202ENST00000409760 NIM1KQ8IY84 436 aa12.25□□□□□ -0.45
VAMP8-202ENST00000409760 TRMT112Q9UI30 125 aaKnown RBP12.25□□□□□ -0.45
VAMP8-202ENST00000409760 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
VAMP8-202ENST00000409760 EXOSC9Q06265 439 aaKnown RBP12.24□□□□□ -0.45
VAMP8-202ENST00000409760 KIAA2012Q0VF49 1180 aa12.24□□□□□ -0.45
VAMP8-202ENST00000409760 GRAPQ13588 217 aa12.24□□□□□ -0.45
VAMP8-202ENST00000409760 CCDC191Q8NCU4 936 aa12.24□□□□□ -0.45
VAMP8-202ENST00000409760 GRAPLQ8TC17 118 aaPredicted RBP12.24□□□□□ -0.45
VAMP8-202ENST00000409760 PHAXQ9H814 394 aaKnown RBP12.24□□□□□ -0.45
VAMP8-202ENST00000409760 YDJCA8MPS7 323 aa12.23□□□□□ -0.45
VAMP8-202ENST00000409760 CT47B1P0C2W7 299 aaPredicted RBP12.23□□□□□ -0.45
VAMP8-202ENST00000409760 USP50Q70EL3 339 aaPredicted RBP12.23□□□□□ -0.45
VAMP8-202ENST00000409760 METTL22Q9BUU2 404 aaPredicted RBP12.23□□□□□ -0.45
VAMP8-202ENST00000409760 TMX4Q9H1E5 349 aaPredicted RBP12.23□□□□□ -0.45
VAMP8-202ENST00000409760 WBP1LQ9NX94 342 aa12.23□□□□□ -0.45
VAMP8-202ENST00000409760 GPRC5DQ9NZD1 345 aa12.23□□□□□ -0.45
VAMP8-202ENST00000409760 ZNRF3Q9ULT6 936 aa12.23□□□□□ -0.45
VAMP8-202ENST00000409760 TRAF5O00463 557 aa12.22□□□□□ -0.45
VAMP8-202ENST00000409760 LMOD1P29536 600 aaPredicted RBP12.22□□□□□ -0.45
VAMP8-202ENST00000409760 SF3B3Q15393 1217 aaKnown RBP12.22□□□□□ -0.45
VAMP8-202ENST00000409760 CST9Q5W186 159 aa12.22□□□□□ -0.45
VAMP8-202ENST00000409760 DPP8Q6V1X1 898 aaPredicted RBP12.22□□□□□ -0.45
VAMP8-202ENST00000409760 MPNDQ8N594 471 aa12.22□□□□□ -0.45
VAMP8-202ENST00000409760 ZBTB38Q8NAP3 1195 aaPredicted RBP12.22□□□□□ -0.45
VAMP8-202ENST00000409760 SUPT20HQ8NEM7 779 aa12.22□□□□□ -0.45
VAMP8-202ENST00000409760 FAM89AQ96GI7 184 aa12.22□□□□□ -0.45
VAMP8-202ENST00000409760 YTHDC1Q96MU7 727 aaKnown RBP12.22□□□□□ -0.45
VAMP8-202ENST00000409760 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
VAMP8-202ENST00000409760 PI4KAP2A4QPH2 592 aa12.21□□□□□ -0.45
VAMP8-202ENST00000409760 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
VAMP8-202ENST00000409760 GMPSP49915 693 aaPredicted RBP12.21□□□□□ -0.45
VAMP8-202ENST00000409760 HIRAP54198 1017 aaPredicted RBP12.21□□□□□ -0.45
VAMP8-202ENST00000409760 SLFN5Q08AF3 891 aa12.21□□□□□ -0.45
VAMP8-202ENST00000409760 FLIIQ13045 1269 aa12.21□□□□□ -0.45
VAMP8-202ENST00000409760 DDX46Q7L014 1031 aaKnown RBP12.21□□□□□ -0.45
VAMP8-202ENST00000409760 TMC4Q7Z404 712 aa12.21□□□□□ -0.45
VAMP8-202ENST00000409760 PI4KAP1Q8N8J0 262 aa12.21□□□□□ -0.45
VAMP8-202ENST00000409760 CELF1Q92879 486 aaKnown RBP12.21□□□□□ -0.45
VAMP8-202ENST00000409760 MYD88Q99836 296 aa12.21□□□□□ -0.45
VAMP8-202ENST00000409760 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
VAMP8-202ENST00000409760 CWC25Q9NXE8 425 aaPredicted RBP12.21□□□□□ -0.45
VAMP8-202ENST00000409760 PGAP2Q9UHJ9 254 aa12.21□□□□□ -0.45
VAMP8-202ENST00000409760 MAP3K2Q9Y2U5 619 aa12.21□□□□□ -0.45
VAMP8-202ENST00000409760 CDHR2Q9BYE9 1310 aa12.2□□□□□ -0.46
VAMP8-202ENST00000409760 SHTN1A0MZ66 631 aa12.2□□□□□ -0.46
VAMP8-202ENST00000409760 FKBP5Q13451 457 aaPredicted RBP12.2□□□□□ -0.46
VAMP8-202ENST00000409760 DEFB115Q30KQ5 88 aa12.2□□□□□ -0.46
VAMP8-202ENST00000409760 PRDM10Q9NQV6 1147 aa12.2□□□□□ -0.46
VAMP8-202ENST00000409760 WDR33Q9C0J8 1336 aaKnown RBP12.19□□□□□ -0.46
VAMP8-202ENST00000409760 CAPN15O75808 1086 aa12.19□□□□□ -0.46
VAMP8-202ENST00000409760 RAD17O75943 681 aa12.19□□□□□ -0.46
VAMP8-202ENST00000409760 PCCAP05165 728 aaPredicted RBP12.19□□□□□ -0.46
VAMP8-202ENST00000409760 CIAPIN1Q6FI81 312 aa12.19□□□□□ -0.46
VAMP8-202ENST00000409760 TRPM4Q8TD43 1214 aa12.19□□□□□ -0.46
VAMP8-202ENST00000409760 DNAAF4Q8WXU2 420 aa12.19□□□□□ -0.46
VAMP8-202ENST00000409760 TRPM7Q96QT4 1865 aa12.19□□□□□ -0.46
VAMP8-202ENST00000409760 IRS4O14654 1257 aaPredicted RBP12.18□□□□□ -0.46
VAMP8-202ENST00000409760 HSPA8P11142 646 aaKnown RBP12.18□□□□□ -0.46
VAMP8-202ENST00000409760 GPSM2P81274 684 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms