RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SMC4Q9NTJ3 1288 aa39.64■■■■□ 3.94
TRAF3IP1-203ENST00000409739 PTPRCP08575 1304 aa39.64■■■■□ 3.94
TRAF3IP1-203ENST00000409739 PDE8AO60658 829 aa39.62■■■■□ 3.93
TRAF3IP1-203ENST00000409739 GRAPQ13588 217 aa39.62■■■■□ 3.93
TRAF3IP1-203ENST00000409739 UBE3BQ7Z3V4 1068 aa39.62■■■■□ 3.93
TRAF3IP1-203ENST00000409739 GRAPLQ8TC17 118 aaPredicted RBP39.62■■■■□ 3.93
TRAF3IP1-203ENST00000409739 SPEF2Q9C093 1822 aa39.62■■■■□ 3.93
TRAF3IP1-203ENST00000409739 H7C1W4 665 aa39.61■■■■□ 3.93
TRAF3IP1-203ENST00000409739 RTKN2Q8IZC4 609 aa39.61■■■■□ 3.93
TRAF3IP1-203ENST00000409739 CC2D2BQ6DHV5 1058 aa39.6■■■■□ 3.93
TRAF3IP1-203ENST00000409739 FKBP4Q02790 459 aaKnown RBP eCLIP39.59■■■■□ 3.93
TRAF3IP1-203ENST00000409739 SLC4A10Q6U841 1118 aa39.59■■■■□ 3.93
TRAF3IP1-203ENST00000409739 CASP7P55210 303 aa39.58■■■■□ 3.93
TRAF3IP1-203ENST00000409739 ATP6V0A2Q9Y487 856 aa39.58■■■■□ 3.93
TRAF3IP1-203ENST00000409739 BBOX1O75936 387 aa39.57■■■■□ 3.93
TRAF3IP1-203ENST00000409739 RARSP54136 660 aaKnown RBP39.56■■■■□ 3.92
TRAF3IP1-203ENST00000409739 CTSWP56202 376 aa39.56■■■■□ 3.92
TRAF3IP1-203ENST00000409739 CCDC152Q4G0S7 254 aa39.55■■■■□ 3.92
TRAF3IP1-203ENST00000409739 CELF1Q92879 486 aaKnown RBP39.55■■■■□ 3.92
TRAF3IP1-203ENST00000409739 ZC3H4Q9UPT8 1303 aaKnown RBP39.55■■■■□ 3.92
TRAF3IP1-203ENST00000409739 ZNF526Q8TF50 670 aaPredicted RBP39.54■■■■□ 3.92
TRAF3IP1-203ENST00000409739 ALDH1L1O75891 902 aa39.53■■■■□ 3.92
TRAF3IP1-203ENST00000409739 BRPF1P55201 1214 aaPredicted RBP39.53■■■■□ 3.92
TRAF3IP1-203ENST00000409739 GRIPAP1Q4V328 841 aa39.53■■■■□ 3.92
TRAF3IP1-203ENST00000409739 PSMD1Q99460 953 aa39.53■■■■□ 3.92
TRAF3IP1-203ENST00000409739 SRCIN1Q9C0H9 1055 aa39.53■■■■□ 3.92
TRAF3IP1-203ENST00000409739 LTBP1Q14766 1721 aa39.52■■■■□ 3.92
TRAF3IP1-203ENST00000409739 CCDC85AQ96PX6 553 aaPredicted RBP39.52■■■■□ 3.92
TRAF3IP1-203ENST00000409739 PLA2G12BQ9BX93 195 aa39.52■■■■□ 3.92
TRAF3IP1-203ENST00000409739 SEC31BQ9NQW1 1179 aa39.52■■■■□ 3.92
TRAF3IP1-203ENST00000409739 ZNF277Q9NRM2 450 aaPredicted RBP39.52■■■■□ 3.92
TRAF3IP1-203ENST00000409739 TMC4Q7Z404 712 aa39.51■■■■□ 3.92
TRAF3IP1-203ENST00000409739 SP8Q8IXZ3 490 aa39.51■■■■□ 3.92
TRAF3IP1-203ENST00000409739 TTLL11Q8NHH1 800 aa39.5■■■■□ 3.91
TRAF3IP1-203ENST00000409739 TMX4Q9H1E5 349 aaPredicted RBP39.5■■■■□ 3.91
TRAF3IP1-203ENST00000409739 DUOX1Q9NRD9 1551 aa39.49■■■■□ 3.91
TRAF3IP1-203ENST00000409739 GRM8O00222 908 aa39.48■■■■□ 3.91
TRAF3IP1-203ENST00000409739 GPBP1L1Q9HC44 474 aaPredicted RBP39.48■■■■□ 3.91
TRAF3IP1-203ENST00000409739 RTL9Q8NET4 1388 aa39.47■■■■□ 3.91
TRAF3IP1-203ENST00000409739 NOB1Q9ULX3 412 aaKnown RBP39.47■■■■□ 3.91
TRAF3IP1-203ENST00000409739 COL4A5P29400 1685 aa39.46■■■■□ 3.91
TRAF3IP1-203ENST00000409739 RPS8P62241 208 aaKnown RBP39.46■■■■□ 3.91
TRAF3IP1-203ENST00000409739 IARSP41252 1262 aaKnown RBP39.45■■■■□ 3.91
TRAF3IP1-203ENST00000409739 GREM2Q9H772 168 aa39.45■■■■□ 3.91
TRAF3IP1-203ENST00000409739 KIF16BQ96L93 1317 aa39.44■■■■□ 3.9
TRAF3IP1-203ENST00000409739 C9orf78Q9NZ63 289 aaPredicted RBP39.44■■■■□ 3.9
TRAF3IP1-203ENST00000409739 DPP8Q6V1X1 898 aaPredicted RBP39.41■■■■□ 3.9
TRAF3IP1-203ENST00000409739 MPNDQ8N594 471 aa39.41■■■■□ 3.9
TRAF3IP1-203ENST00000409739 RTFDC1Q9BY42 306 aaPredicted RBP39.41■■■■□ 3.9
TRAF3IP1-203ENST00000409739 CSF1RP07333 972 aa39.4■■■■□ 3.9
TRAF3IP1-203ENST00000409739 CDC5LQ99459 802 aaKnown RBP39.4■■■■□ 3.9
TRAF3IP1-203ENST00000409739 UTYO14607 1347 aa39.4■■■■□ 3.9
TRAF3IP1-203ENST00000409739 FOXO4P98177 505 aa39.39■■■■□ 3.9
TRAF3IP1-203ENST00000409739 FAM161AQ3B820 660 aa39.39■■■■□ 3.9
TRAF3IP1-203ENST00000409739 ANKRD18AQ8IVF6 992 aa39.39■■■■□ 3.9
TRAF3IP1-203ENST00000409739 API5Q9BZZ5 524 aaKnown RBP39.39■■■■□ 3.9
TRAF3IP1-203ENST00000409739 KDM2BQ8NHM5 1336 aa39.39■■■■□ 3.9
TRAF3IP1-203ENST00000409739 WDR90Q96KV7 1748 aa39.38■■■■□ 3.89
TRAF3IP1-203ENST00000409739 BCAR3O75815 825 aa39.38■■■■□ 3.89
TRAF3IP1-203ENST00000409739 A0A1B0GUL6 1792 aa39.37■■■■□ 3.89
TRAF3IP1-203ENST00000409739 GLTPD2A6NH11 291 aa39.36■■■■□ 3.89
TRAF3IP1-203ENST00000409739 NBPF7P0C2Y1 421 aaPredicted RBP39.36■■■■□ 3.89
TRAF3IP1-203ENST00000409739 EPHA10Q5JZY3 1008 aa39.36■■■■□ 3.89
TRAF3IP1-203ENST00000409739 SUPT20HQ8NEM7 779 aa39.36■■■■□ 3.89
TRAF3IP1-203ENST00000409739 ITGA6P23229 1130 aa39.35■■■■□ 3.89
TRAF3IP1-203ENST00000409739 ARHGAP45Q92619 1136 aa39.35■■■■□ 3.89
TRAF3IP1-203ENST00000409739 NMRK2Q9NPI5 230 aa39.35■■■■□ 3.89
TRAF3IP1-203ENST00000409739 GPSM2P81274 684 aa39.34■■■■□ 3.89
TRAF3IP1-203ENST00000409739 SUCLG2Q96I99 432 aa39.34■■■■□ 3.89
TRAF3IP1-203ENST00000409739 PPIP5K2O43314 1243 aa39.33■■■■□ 3.89
TRAF3IP1-203ENST00000409739 LARGE2Q8N3Y3 721 aa39.33■■■■□ 3.89
TRAF3IP1-203ENST00000409739 NSFL1CQ9UNZ2 370 aaKnown RBP39.33■■■■□ 3.89
TRAF3IP1-203ENST00000409739 CCT4P50991 539 aaKnown RBP39.32■■■■□ 3.89
TRAF3IP1-203ENST00000409739 AOC3Q16853 763 aa39.32■■■■□ 3.89
TRAF3IP1-203ENST00000409739 JDP2Q8WYK2 163 aa39.31■■■■□ 3.88
TRAF3IP1-203ENST00000409739 KAZALD1Q96I82 304 aa39.31■■■■□ 3.88
TRAF3IP1-203ENST00000409739 VPS33BQ9H267 617 aa39.31■■■■□ 3.88
TRAF3IP1-203ENST00000409739 KIF3CO14782 793 aa39.3■■■■□ 3.88
TRAF3IP1-203ENST00000409739 DPY19L2Q6NUT2 758 aa39.3■■■■□ 3.88
TRAF3IP1-203ENST00000409739 LMBR1LQ6UX01 489 aa39.3■■■■□ 3.88
TRAF3IP1-203ENST00000409739 USP44Q9H0E7 712 aa39.3■■■■□ 3.88
TRAF3IP1-203ENST00000409739 ZNF541Q9H0D2 1346 aa39.3■■■■□ 3.88
TRAF3IP1-203ENST00000409739 FZD9O00144 591 aa39.29■■■■□ 3.88
TRAF3IP1-203ENST00000409739 BSDC1Q9NW68 430 aaPredicted RBP39.29■■■■□ 3.88
TRAF3IP1-203ENST00000409739 CHMP3Q9Y3E7 222 aa39.29■■■■□ 3.88
TRAF3IP1-203ENST00000409739 FRAT1Q92837 279 aaPredicted RBP39.28■■■■□ 3.88
TRAF3IP1-203ENST00000409739 PODXL2Q9NZ53 605 aa39.28■■■■□ 3.88
TRAF3IP1-203ENST00000409739 POLLQ9UGP5 575 aa39.28■■■■□ 3.88
TRAF3IP1-203ENST00000409739 ANKRD18BA2A2Z9 1011 aa39.27■■■■□ 3.88
TRAF3IP1-203ENST00000409739 IPO8O15397 1037 aaKnown RBP39.27■■■■□ 3.88
TRAF3IP1-203ENST00000409739 TRIM27P14373 513 aa39.27■■■■□ 3.88
TRAF3IP1-203ENST00000409739 SCN4AP35499 1836 aa39.27■■■■□ 3.88
TRAF3IP1-203ENST00000409739 IGHMBP2P38935 993 aaKnown RBP39.27■■■■□ 3.88
TRAF3IP1-203ENST00000409739 KIAA2012Q0VF49 1180 aa39.27■■■■□ 3.88
TRAF3IP1-203ENST00000409739 ATF7IPQ6VMQ6 1270 aa39.26■■■■□ 3.88
TRAF3IP1-203ENST00000409739 NIM1KQ8IY84 436 aa39.26■■■■□ 3.88
TRAF3IP1-203ENST00000409739 DDNO94850 711 aaPredicted RBP39.25■■■■□ 3.87
TRAF3IP1-203ENST00000409739 IFIT5Q13325 482 aaKnown RBP39.25■■■■□ 3.87
TRAF3IP1-203ENST00000409739 TBC1D16Q8TBP0 767 aa39.25■■■■□ 3.87
TRAF3IP1-203ENST00000409739 RRAGCQ9HB90 399 aa39.25■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms