RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 PNPLA7Q6ZV29 1317 aa19.36■□□□□ 0.69
SHANK2-204ENST00000409530 PDE8AO60658 829 aa19.36■□□□□ 0.69
SHANK2-204ENST00000409530 G3BP1Q13283 466 aaKnown RBP eCLIP19.36■□□□□ 0.69
SHANK2-204ENST00000409530 CCDC57Q2TAC2 916 aa19.36■□□□□ 0.69
SHANK2-204ENST00000409530 RFX5P48382 616 aaPredicted RBP19.35■□□□□ 0.69
SHANK2-204ENST00000409530 PTPN12Q05209 780 aaKnown RBP19.35■□□□□ 0.69
SHANK2-204ENST00000409530 RHPN1Q8TCX5 695 aa19.35■□□□□ 0.69
SHANK2-204ENST00000409530 STK32BQ9NY57 414 aa19.35■□□□□ 0.69
SHANK2-204ENST00000409530 CARMIL3Q8ND23 1372 aa19.34■□□□□ 0.69
SHANK2-204ENST00000409530 C3orf67Q6ZVT6 689 aa19.34■□□□□ 0.69
SHANK2-204ENST00000409530 TTLL11Q8NHH1 800 aa19.34■□□□□ 0.69
SHANK2-204ENST00000409530 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.34■□□□□ 0.69
SHANK2-204ENST00000409530 ITGA6P23229 1130 aa19.34■□□□□ 0.69
SHANK2-204ENST00000409530 IFIT5Q13325 482 aaKnown RBP19.33■□□□□ 0.69
SHANK2-204ENST00000409530 SLC15A2Q16348 729 aa19.33■□□□□ 0.69
SHANK2-204ENST00000409530 TNRC6CQ9HCJ0 1690 aaKnown RBP19.33■□□□□ 0.68
SHANK2-204ENST00000409530 TAF1P21675 1872 aa19.33■□□□□ 0.68
SHANK2-204ENST00000409530 LRRC24Q50LG9 513 aa19.33■□□□□ 0.68
SHANK2-204ENST00000409530 KIF1BPQ96EK5 621 aa19.33■□□□□ 0.68
SHANK2-204ENST00000409530 PLA2G12BQ9BX93 195 aa19.33■□□□□ 0.68
SHANK2-204ENST00000409530 PUS3Q9BZE2 481 aaKnown RBP19.33■□□□□ 0.68
SHANK2-204ENST00000409530 HSP90AB4PQ58FF6 505 aa19.32■□□□□ 0.68
SHANK2-204ENST00000409530 CNBD1Q8NA66 436 aa19.32■□□□□ 0.68
SHANK2-204ENST00000409530 NYXQ9GZU5 481 aa19.32■□□□□ 0.68
SHANK2-204ENST00000409530 SEC31BQ9NQW1 1179 aa19.32■□□□□ 0.68
SHANK2-204ENST00000409530 PDGFDQ9GZP0 370 aaPredicted RBP19.31■□□□□ 0.68
SHANK2-204ENST00000409530 RAB11FIP3O75154 756 aa19.31■□□□□ 0.68
SHANK2-204ENST00000409530 SASH1O94885 1247 aa19.31■□□□□ 0.68
SHANK2-204ENST00000409530 TPTE2Q6XPS3 522 aa19.31■□□□□ 0.68
SHANK2-204ENST00000409530 NOP58Q9Y2X3 529 aaKnown RBP19.31■□□□□ 0.68
SHANK2-204ENST00000409530 DDR1Q08345 913 aa19.3■□□□□ 0.68
SHANK2-204ENST00000409530 TFCP2Q12800 502 aa19.3■□□□□ 0.68
SHANK2-204ENST00000409530 COPRSQ9NQ92 184 aa19.3■□□□□ 0.68
SHANK2-204ENST00000409530 COL4A1P02462 1669 aa19.3■□□□□ 0.68
SHANK2-204ENST00000409530 ANKRD18BA2A2Z9 1011 aa19.3■□□□□ 0.68
SHANK2-204ENST00000409530 CSF1RP07333 972 aa19.3■□□□□ 0.68
SHANK2-204ENST00000409530 HMGB2P26583 209 aaKnown RBP19.29■□□□□ 0.68
SHANK2-204ENST00000409530 AACSQ86V21 672 aa19.29■□□□□ 0.68
SHANK2-204ENST00000409530 ERC1Q8IUD2 1116 aa19.29■□□□□ 0.68
SHANK2-204ENST00000409530 PLEKHM2Q8IWE5 1019 aa19.29■□□□□ 0.68
SHANK2-204ENST00000409530 SERPINB2P05120 415 aa19.28■□□□□ 0.68
SHANK2-204ENST00000409530 CCDC152Q4G0S7 254 aa19.28■□□□□ 0.68
SHANK2-204ENST00000409530 PRR5LQ6MZQ0 368 aa19.28■□□□□ 0.68
SHANK2-204ENST00000409530 CLASRPQ8N2M8 674 aaKnown RBP19.28■□□□□ 0.68
SHANK2-204ENST00000409530 CCDC8Q9H0W5 538 aaPredicted RBP19.28■□□□□ 0.68
SHANK2-204ENST00000409530 CNNM1Q9NRU3 951 aa19.28■□□□□ 0.68
SHANK2-204ENST00000409530 TLR7Q9NYK1 1049 aaKnown RBP19.28■□□□□ 0.68
SHANK2-204ENST00000409530 GOLGB1Q14789 3259 aaKnown RBP19.27■□□□□ 0.68
SHANK2-204ENST00000409530 MX1P20591 662 aa19.27■□□□□ 0.68
SHANK2-204ENST00000409530 FLAD1Q8NFF5 587 aa19.27■□□□□ 0.68
SHANK2-204ENST00000409530 RGL2O15211 777 aa19.27■□□□□ 0.67
SHANK2-204ENST00000409530 MMP10P09238 476 aa19.27■□□□□ 0.67
SHANK2-204ENST00000409530 LDHAL6AQ6ZMR3 332 aa19.27■□□□□ 0.67
SHANK2-204ENST00000409530 ATG9AQ7Z3C6 839 aa19.27■□□□□ 0.67
SHANK2-204ENST00000409530 EYA2O00167 538 aa19.26■□□□□ 0.67
SHANK2-204ENST00000409530 POLRMTO00411 1230 aaKnown RBP19.26■□□□□ 0.67
SHANK2-204ENST00000409530 IFIT2P09913 472 aaKnown RBP19.26■□□□□ 0.67
SHANK2-204ENST00000409530 NLRP3Q96P20 1036 aa19.25■□□□□ 0.67
SHANK2-204ENST00000409530 HSP90B1P14625 803 aaKnown RBP19.25■□□□□ 0.67
SHANK2-204ENST00000409530 TM4SF1P30408 202 aa19.25■□□□□ 0.67
SHANK2-204ENST00000409530 ST5P78524 1137 aa19.25■□□□□ 0.67
SHANK2-204ENST00000409530 EAF2Q96CJ1 260 aaPredicted RBP19.25■□□□□ 0.67
SHANK2-204ENST00000409530 MAP4K4O95819 1239 aaPredicted RBP19.24■□□□□ 0.67
SHANK2-204ENST00000409530 PDE1AP54750 535 aa19.24■□□□□ 0.67
SHANK2-204ENST00000409530 HELBQ8NG08 1087 aaPredicted RBP19.24■□□□□ 0.67
SHANK2-204ENST00000409530 MPHOSPH8Q99549 860 aa19.24■□□□□ 0.67
SHANK2-204ENST00000409530 GSPT1P15170 499 aaKnown RBP19.24■□□□□ 0.67
SHANK2-204ENST00000409530 METTL24Q5JXM2 366 aa19.24■□□□□ 0.67
SHANK2-204ENST00000409530 NLGN1Q8N2Q7 840 aa19.24■□□□□ 0.67
SHANK2-204ENST00000409530 NEUROD6Q96NK8 337 aa19.24■□□□□ 0.67
SHANK2-204ENST00000409530 RIC1Q4ADV7 1423 aa19.24■□□□□ 0.67
SHANK2-204ENST00000409530 IL15P40933 162 aaPredicted RBP19.23■□□□□ 0.67
SHANK2-204ENST00000409530 QSER1Q2KHR3 1735 aa19.22■□□□□ 0.67
SHANK2-204ENST00000409530 TNNI3KQ59H18 835 aa19.22■□□□□ 0.67
SHANK2-204ENST00000409530 CCDC125Q86Z20 511 aa19.22■□□□□ 0.67
SHANK2-204ENST00000409530 UPF1Q92900 1129 aaKnown RBP eCLIP19.22■□□□□ 0.67
SHANK2-204ENST00000409530 PARP3Q9Y6F1 533 aa19.22■□□□□ 0.67
SHANK2-204ENST00000409530 FPGT-TNNI3KV9GXZ4 949 aa19.22■□□□□ 0.67
SHANK2-204ENST00000409530 IGHMBP2P38935 993 aaKnown RBP19.22■□□□□ 0.67
SHANK2-204ENST00000409530 TTC22Q5TAA0 569 aa19.22■□□□□ 0.67
SHANK2-204ENST00000409530 SLC51AQ86UW1 340 aa19.22■□□□□ 0.67
SHANK2-204ENST00000409530 CELF1Q92879 486 aaKnown RBP19.22■□□□□ 0.67
SHANK2-204ENST00000409530 LRP5O75197 1615 aa19.22■□□□□ 0.67
SHANK2-204ENST00000409530 SALL3Q9BXA9 1300 aa19.21■□□□□ 0.67
SHANK2-204ENST00000409530 TIMM10P62072 90 aa19.21■□□□□ 0.67
SHANK2-204ENST00000409530 TSHZ2Q9NRE2 1034 aa19.21■□□□□ 0.67
SHANK2-204ENST00000409530 CEP126Q9P2H0 1117 aa19.21■□□□□ 0.67
SHANK2-204ENST00000409530 TRIM6-TRIM34B2RNG4 842 aa19.2■□□□□ 0.66
SHANK2-204ENST00000409530 TAF5LO75529 589 aa19.2■□□□□ 0.66
SHANK2-204ENST00000409530 C8orf34Q49A92 452 aa19.2■□□□□ 0.66
SHANK2-204ENST00000409530 SLC10A5Q5PT55 438 aa19.2■□□□□ 0.66
SHANK2-204ENST00000409530 CDC5LQ99459 802 aaKnown RBP19.2■□□□□ 0.66
SHANK2-204ENST00000409530 DBNDD2Q9BQY9 259 aa19.2■□□□□ 0.66
SHANK2-204ENST00000409530 ZNF609O15014 1411 aa19.2■□□□□ 0.66
SHANK2-204ENST00000409530 ANKRD31Q8N7Z5 1873 aa19.2■□□□□ 0.66
SHANK2-204ENST00000409530 SNAP23O00161 211 aa19.19■□□□□ 0.66
SHANK2-204ENST00000409530 CIAO1O76071 339 aa19.19■□□□□ 0.66
SHANK2-204ENST00000409530 ANKRD18AQ8IVF6 992 aa19.19■□□□□ 0.66
SHANK2-204ENST00000409530 RPGRQ92834 1020 aaKnown RBP19.19■□□□□ 0.66
SHANK2-204ENST00000409530 DBNLQ9UJU6 430 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms