RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 RPGRQ92834 1020 aaKnown RBP19.02■□□□□ 0.64
SNRNP27-202ENST00000409116 PLA2G12BQ9BX93 195 aa19.02■□□□□ 0.64
SNRNP27-202ENST00000409116 ZBTB7BO15156 539 aaPredicted RBP19.01■□□□□ 0.63
SNRNP27-202ENST00000409116 SF3B3Q15393 1217 aaKnown RBP19.01■□□□□ 0.63
SNRNP27-202ENST00000409116 TTLL11Q8NHH1 800 aa19.01■□□□□ 0.63
SNRNP27-202ENST00000409116 ZNF622Q969S3 477 aaKnown RBP eCLIP19.01■□□□□ 0.636e-7■■■□□ 15.4
SNRNP27-202ENST00000409116 BICC1Q9H694 974 aaKnown RBP19.01■□□□□ 0.63
SNRNP27-202ENST00000409116 LRRFIP2Q9Y608 721 aaKnown RBP19.01■□□□□ 0.63
SNRNP27-202ENST00000409116 NPR1P16066 1061 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 LMBR1LQ6UX01 489 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 MASTLQ96GX5 879 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 GREM2Q9H772 168 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 PDZRN3Q9UPQ7 1066 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 IRX6P78412 446 aaPredicted RBP19■□□□□ 0.63
SNRNP27-202ENST00000409116 FAM161AQ3B820 660 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 CCDC152Q4G0S7 254 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 STYK1Q6J9G0 422 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 ANKRD44Q8N8A2 993 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 CRBNQ96SW2 442 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 C1orf115Q9H7X2 142 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 DDX19BQ9UMR2 479 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 CHMP3Q9Y3E7 222 aa19■□□□□ 0.63
SNRNP27-202ENST00000409116 DLEC1Q9Y238 1755 aa18.99■□□□□ 0.63
SNRNP27-202ENST00000409116 MYH3P11055 1940 aa18.99■□□□□ 0.63
SNRNP27-202ENST00000409116 COL4A1P02462 1669 aa18.99■□□□□ 0.63
SNRNP27-202ENST00000409116 GNAI2P04899 355 aa18.99■□□□□ 0.63
SNRNP27-202ENST00000409116 CSF1RP07333 972 aa18.99■□□□□ 0.63
SNRNP27-202ENST00000409116 HOXA10P31260 410 aaPredicted RBP18.99■□□□□ 0.63
SNRNP27-202ENST00000409116 DDX46Q7L014 1031 aaKnown RBP18.98■□□□□ 0.63
SNRNP27-202ENST00000409116 RBM17Q96I25 401 aaKnown RBP18.98■□□□□ 0.63
SNRNP27-202ENST00000409116 SEC31BQ9NQW1 1179 aa18.98■□□□□ 0.63
SNRNP27-202ENST00000409116 RABL6Q3YEC7 729 aaPredicted RBP18.97■□□□□ 0.63
SNRNP27-202ENST00000409116 PIM2Q9P1W9 311 aa18.97■□□□□ 0.63
SNRNP27-202ENST00000409116 BRCA1P38398 1863 aaKnown RBP18.96■□□□□ 0.63
SNRNP27-202ENST00000409116 RTL9Q8NET4 1388 aa18.96■□□□□ 0.63
SNRNP27-202ENST00000409116 PRPF40BQ6NWY9 871 aaKnown RBP18.96■□□□□ 0.63
SNRNP27-202ENST00000409116 SLC51AQ86UW1 340 aa18.96■□□□□ 0.63
SNRNP27-202ENST00000409116 TTLL6Q8N841 843 aa18.96■□□□□ 0.63
SNRNP27-202ENST00000409116 CNKSR1Q969H4 720 aa18.96■□□□□ 0.63
SNRNP27-202ENST00000409116 CRAMP1Q96RY5 1269 aa18.96■□□□□ 0.63
SNRNP27-202ENST00000409116 ZBTB40Q9NUA8 1239 aa18.96■□□□□ 0.63
SNRNP27-202ENST00000409116 HDAC5Q9UQL6 1122 aa18.96■□□□□ 0.63
SNRNP27-202ENST00000409116 TAF1P21675 1872 aa18.96■□□□□ 0.63
SNRNP27-202ENST00000409116 CACNA1SQ13698 1873 aa18.95■□□□□ 0.62
SNRNP27-202ENST00000409116 ITGA6P23229 1130 aa18.95■□□□□ 0.62
SNRNP27-202ENST00000409116 GRAPQ13588 217 aa18.95■□□□□ 0.62
SNRNP27-202ENST00000409116 DALRD3Q5D0E6 543 aaKnown RBP18.95■□□□□ 0.62
SNRNP27-202ENST00000409116 PELP1Q8IZL8 1130 aaKnown RBP18.95■□□□□ 0.62
SNRNP27-202ENST00000409116 GRAPLQ8TC17 118 aaPredicted RBP18.95■□□□□ 0.62
SNRNP27-202ENST00000409116 CELF1Q92879 486 aaKnown RBP18.95■□□□□ 0.62
SNRNP27-202ENST00000409116 BCS1LQ9Y276 419 aa18.95■□□□□ 0.62
SNRNP27-202ENST00000409116 SLX4Q8IY92 1834 aa18.94■□□□□ 0.62
SNRNP27-202ENST00000409116 ALDH1B1P30837 517 aa18.94■□□□□ 0.62
SNRNP27-202ENST00000409116 ZNF219Q9P2Y4 722 aaPredicted RBP18.94■□□□□ 0.62
SNRNP27-202ENST00000409116 IFIT5Q13325 482 aaKnown RBP18.93■□□□□ 0.62
SNRNP27-202ENST00000409116 ANKRD18BA2A2Z9 1011 aa18.92■□□□□ 0.62
SNRNP27-202ENST00000409116 PPEF1O14829 653 aaPredicted RBP18.92■□□□□ 0.62
SNRNP27-202ENST00000409116 CCDC57Q2TAC2 916 aa18.92■□□□□ 0.62
SNRNP27-202ENST00000409116 OLFM4Q6UX06 510 aa18.92■□□□□ 0.62
SNRNP27-202ENST00000409116 EXOC6Q8TAG9 804 aa18.92■□□□□ 0.62
SNRNP27-202ENST00000409116 ZNF594Q96JF6 807 aaPredicted RBP18.92■□□□□ 0.62
SNRNP27-202ENST00000409116 CHMP4BQ9H444 224 aaKnown RBP18.92■□□□□ 0.62
SNRNP27-202ENST00000409116 YBX3P16989 372 aaKnown RBP eCLIP18.91■□□□□ 0.62
SNRNP27-202ENST00000409116 RPS8P62241 208 aaKnown RBP18.91■□□□□ 0.62
SNRNP27-202ENST00000409116 TAF7LQ5H9L4 462 aa18.91■□□□□ 0.62
SNRNP27-202ENST00000409116 ANKRD18AQ8IVF6 992 aa18.91■□□□□ 0.62
SNRNP27-202ENST00000409116 CDC5LQ99459 802 aaKnown RBP18.91■□□□□ 0.62
SNRNP27-202ENST00000409116 PNMA6EA0A0J9YXQ4 647 aa18.9■□□□□ 0.62
SNRNP27-202ENST00000409116 SRGAP3O43295 1099 aa18.9■□□□□ 0.62
SNRNP27-202ENST00000409116 C21orf2O43822 256 aa18.9■□□□□ 0.62
SNRNP27-202ENST00000409116 BBOX1O75936 387 aa18.9■□□□□ 0.62
SNRNP27-202ENST00000409116 MTX1Q13505 466 aa18.9■□□□□ 0.62
SNRNP27-202ENST00000409116 CEP85Q6P2H3 762 aa18.9■□□□□ 0.62
SNRNP27-202ENST00000409116 KLHDC4Q8TBB5 520 aa18.9■□□□□ 0.62
SNRNP27-202ENST00000409116 SPEF2Q9C093 1822 aa18.9■□□□□ 0.62
SNRNP27-202ENST00000409116 RFX5P48382 616 aaPredicted RBP18.89■□□□□ 0.61
SNRNP27-202ENST00000409116 C7orf43Q8WVR3 580 aa18.89■□□□□ 0.61
SNRNP27-202ENST00000409116 IGHMBP2P38935 993 aaKnown RBP18.88■□□□□ 0.61
SNRNP27-202ENST00000409116 ATP6V0A2Q9Y487 856 aa18.88■□□□□ 0.61
SNRNP27-202ENST00000409116 ATP8B2P98198 1209 aa18.87■□□□□ 0.61
SNRNP27-202ENST00000409116 GPR162Q16538 588 aa18.87■□□□□ 0.61
SNRNP27-202ENST00000409116 MPHOSPH8Q99549 860 aa18.87■□□□□ 0.61
SNRNP27-202ENST00000409116 PA2G4Q9UQ80 394 aaKnown RBP18.87■□□□□ 0.61
SNRNP27-202ENST00000409116 PTPN12Q05209 780 aaKnown RBP18.86■□□□□ 0.61
SNRNP27-202ENST00000409116 SIRT2Q8IXJ6 389 aa18.86■□□□□ 0.61
SNRNP27-202ENST00000409116 PUS3Q9BZE2 481 aaKnown RBP18.86■□□□□ 0.61
SNRNP27-202ENST00000409116 SIL1Q9H173 461 aa18.86■□□□□ 0.61
SNRNP27-202ENST00000409116 ARFGEF1Q9Y6D6 1849 aa18.86■□□□□ 0.61
SNRNP27-202ENST00000409116 UTRNP46939 3433 aa18.85■□□□□ 0.61
SNRNP27-202ENST00000409116 POLA2Q14181 598 aa18.85■□□□□ 0.61
SNRNP27-202ENST00000409116 LDHAL6AQ6ZMR3 332 aa18.85■□□□□ 0.61
SNRNP27-202ENST00000409116 TMC4Q7Z404 712 aa18.85■□□□□ 0.61
SNRNP27-202ENST00000409116 SP8Q8IXZ3 490 aa18.85■□□□□ 0.61
SNRNP27-202ENST00000409116 BSDC1Q9NW68 430 aaPredicted RBP18.85■□□□□ 0.61
SNRNP27-202ENST00000409116 PCDHB15Q9Y5E8 787 aa18.85■□□□□ 0.61
SNRNP27-202ENST00000409116 LRRC37AA6NMS7 1700 aa18.85■□□□□ 0.61
SNRNP27-202ENST00000409116 LRRC24Q50LG9 513 aa18.84■□□□□ 0.61
SNRNP27-202ENST00000409116 CCDC93Q567U6 631 aa18.84■□□□□ 0.61
SNRNP27-202ENST00000409116 SSH3Q8TE77 659 aa18.84■□□□□ 0.61
SNRNP27-202ENST00000409116 CNNM1Q9NRU3 951 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms