RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.12□□□□□ -0.15
PCNX4-204ENST00000406949 CKAP2LQ8IYA6 745 aa14.12□□□□□ -0.15
PCNX4-204ENST00000406949 BRF1Q92994 677 aa14.12□□□□□ -0.15
PCNX4-204ENST00000406949 ZNF830Q96NB3 372 aaPredicted RBP14.12□□□□□ -0.15
PCNX4-204ENST00000406949 CEP126Q9P2H0 1117 aa14.12□□□□□ -0.15
PCNX4-204ENST00000406949 DBNLQ9UJU6 430 aaKnown RBP14.12□□□□□ -0.15
PCNX4-204ENST00000406949 TPCN1Q9ULQ1 816 aa14.12□□□□□ -0.15
PCNX4-204ENST00000406949 FMN2Q9NZ56 1722 aa14.12□□□□□ -0.15
PCNX4-204ENST00000406949 CHGBP05060 677 aa14.11□□□□□ -0.15
PCNX4-204ENST00000406949 IFIT1P09914 478 aaKnown RBP14.11□□□□□ -0.15
PCNX4-204ENST00000406949 GPTP24298 496 aa14.11□□□□□ -0.15
PCNX4-204ENST00000406949 CCT2P78371 535 aaKnown RBP14.11□□□□□ -0.15
PCNX4-204ENST00000406949 NEK1Q96PY6 1258 aa14.11□□□□□ -0.15
PCNX4-204ENST00000406949 PXDNLA1KZ92 1463 aa14.11□□□□□ -0.15
PCNX4-204ENST00000406949 APPP05067 770 aa14.11□□□□□ -0.15
PCNX4-204ENST00000406949 GUCY1B3Q02153 619 aa14.11□□□□□ -0.15
PCNX4-204ENST00000406949 ZRSR1Q15695 479 aaKnown RBP14.11□□□□□ -0.15
PCNX4-204ENST00000406949 HSP90AA2PQ14568 343 aaPredicted RBP14.11□□□□□ -0.15
PCNX4-204ENST00000406949 CHST3Q7LGC8 479 aa14.11□□□□□ -0.15
PCNX4-204ENST00000406949 KAZALD1Q96I82 304 aa14.11□□□□□ -0.15
PCNX4-204ENST00000406949 HSP90AB3PQ58FF7 597 aa14.1□□□□□ -0.15
PCNX4-204ENST00000406949 TTC39AQ5SRH9 613 aa14.1□□□□□ -0.15
PCNX4-204ENST00000406949 KRT32Q14532 448 aa14.1□□□□□ -0.15
PCNX4-204ENST00000406949 TTC14Q96N46 770 aa14.1□□□□□ -0.15
PCNX4-204ENST00000406949 ZSWIM6Q9HCJ5 1215 aa14.1□□□□□ -0.15
PCNX4-204ENST00000406949 HAND2P61296 217 aa14.1□□□□□ -0.15
PCNX4-204ENST00000406949 PDIA6Q15084 440 aa14.1□□□□□ -0.15
PCNX4-204ENST00000406949 SLFNL1Q499Z3 407 aa14.1□□□□□ -0.15
PCNX4-204ENST00000406949 Q6ZUG5 572 aa14.1□□□□□ -0.15
PCNX4-204ENST00000406949 CDC37L1Q7L3B6 337 aa14.1□□□□□ -0.15
PCNX4-204ENST00000406949 RAB11FIP4Q86YS3 637 aa14.09□□□□□ -0.15
PCNX4-204ENST00000406949 PPP1R9BQ96SB3 815 aa14.09□□□□□ -0.15
PCNX4-204ENST00000406949 RGPD1P0DJD0 1748 aa14.09□□□□□ -0.15
PCNX4-204ENST00000406949 FAM13BQ9NYF5 915 aa14.09□□□□□ -0.15
PCNX4-204ENST00000406949 TMOD3Q9NYL9 352 aa14.09□□□□□ -0.15
PCNX4-204ENST00000406949 KIF6Q6ZMV9 814 aa14.08□□□□□ -0.15
PCNX4-204ENST00000406949 PLBD2Q8NHP8 589 aa14.08□□□□□ -0.15
PCNX4-204ENST00000406949 MAP4K1Q92918 833 aa14.08□□□□□ -0.15
PCNX4-204ENST00000406949 NUP62CLQ9H1M0 184 aa14.08□□□□□ -0.15
PCNX4-204ENST00000406949 TNMDQ9H2S6 317 aa14.08□□□□□ -0.15
PCNX4-204ENST00000406949 MTMR6Q9Y217 621 aa14.08□□□□□ -0.15
PCNX4-204ENST00000406949 NALCNQ8IZF0 1738 aa14.08□□□□□ -0.15
PCNX4-204ENST00000406949 EPB41L2O43491 1005 aaKnown RBP14.08□□□□□ -0.16
PCNX4-204ENST00000406949 LETM1O95202 739 aaPredicted RBP14.08□□□□□ -0.16
PCNX4-204ENST00000406949 RPS6KB1P23443 525 aa14.08□□□□□ -0.16
PCNX4-204ENST00000406949 MCMDC2Q4G0Z9 681 aa14.08□□□□□ -0.16
PCNX4-204ENST00000406949 CCDC158Q5M9N0 1113 aa14.08□□□□□ -0.16
PCNX4-204ENST00000406949 TAF6LQ9Y6J9 622 aa14.08□□□□□ -0.16
PCNX4-204ENST00000406949 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
PCNX4-204ENST00000406949 JAK2O60674 1132 aa14.08□□□□□ -0.16
PCNX4-204ENST00000406949 CCDC192P0DO97 292 aa14.08□□□□□ -0.16
PCNX4-204ENST00000406949 PTPN12Q05209 780 aaKnown RBP14.08□□□□□ -0.16
PCNX4-204ENST00000406949 NECTIN1Q15223 517 aa14.08□□□□□ -0.16
PCNX4-204ENST00000406949 SF3A1Q15459 793 aaKnown RBP14.08□□□□□ -0.16
PCNX4-204ENST00000406949 TOMM22Q9NS69 142 aa14.08□□□□□ -0.16
PCNX4-204ENST00000406949 NCAPD2Q15021 1401 aa14.07□□□□□ -0.16
PCNX4-204ENST00000406949 ADCY5O95622 1261 aa14.07□□□□□ -0.16
PCNX4-204ENST00000406949 KIF3AQ9Y496 699 aa14.07□□□□□ -0.16
PCNX4-204ENST00000406949 GNL2Q13823 731 aaKnown RBP14.07□□□□□ -0.16
PCNX4-204ENST00000406949 PAG1Q9NWQ8 432 aa14.07□□□□□ -0.16
PCNX4-204ENST00000406949 HMG20BQ9P0W2 317 aa14.07□□□□□ -0.16
PCNX4-204ENST00000406949 CPLX1O14810 134 aa14.07□□□□□ -0.16
PCNX4-204ENST00000406949 TM6SF1Q9BZW5 370 aa14.07□□□□□ -0.16
PCNX4-204ENST00000406949 CNNM1Q9NRU3 951 aa14.07□□□□□ -0.16
PCNX4-204ENST00000406949 NWD1Q149M9 1564 aa14.07□□□□□ -0.16
PCNX4-204ENST00000406949 C1orf167Q5SNV9 1468 aa14.06□□□□□ -0.16
PCNX4-204ENST00000406949 SASS6Q6UVJ0 657 aa14.06□□□□□ -0.16
PCNX4-204ENST00000406949 LRRC24Q50LG9 513 aa14.06□□□□□ -0.16
PCNX4-204ENST00000406949 RALYLQ86SE5 291 aaKnown RBP14.06□□□□□ -0.16
PCNX4-204ENST00000406949 FAM89AQ96GI7 184 aa14.06□□□□□ -0.16
PCNX4-204ENST00000406949 COPRSQ9NQ92 184 aa14.06□□□□□ -0.16
PCNX4-204ENST00000406949 ATP5JP18859 108 aa14.06□□□□□ -0.16
PCNX4-204ENST00000406949 MAP3K11Q16584 847 aa14.06□□□□□ -0.16
PCNX4-204ENST00000406949 TAF5LO75529 589 aa14.05□□□□□ -0.16
PCNX4-204ENST00000406949 APOBRQ0VD83 1088 aa14.05□□□□□ -0.16
PCNX4-204ENST00000406949 TTC12Q9H892 705 aaPredicted RBP14.05□□□□□ -0.16
PCNX4-204ENST00000406949 METTL24Q5JXM2 366 aa14.05□□□□□ -0.16
PCNX4-204ENST00000406949 STK11IPQ8N1F8 1099 aa14.05□□□□□ -0.16
PCNX4-204ENST00000406949 DACT1Q9NYF0 836 aa14.05□□□□□ -0.16
PCNX4-204ENST00000406949 ZKSCAN5Q9Y2L8 839 aa14.05□□□□□ -0.16
PCNX4-204ENST00000406949 RPAP1Q9BWH6 1393 aaPredicted RBP14.05□□□□□ -0.16
PCNX4-204ENST00000406949 IL2RBP14784 551 aa14.04□□□□□ -0.16
PCNX4-204ENST00000406949 A0A1B0GUL7 405 aa14.04□□□□□ -0.16
PCNX4-204ENST00000406949 IL15P40933 162 aaPredicted RBP14.04□□□□□ -0.16
PCNX4-204ENST00000406949 IFIT5Q13325 482 aaKnown RBP14.04□□□□□ -0.16
PCNX4-204ENST00000406949 COL9A3Q14050 684 aaPredicted RBP14.04□□□□□ -0.16
PCNX4-204ENST00000406949 LRRFIP1Q32MZ4 808 aaKnown RBP14.04□□□□□ -0.16
PCNX4-204ENST00000406949 PUS3Q9BZE2 481 aaKnown RBP14.04□□□□□ -0.16
PCNX4-204ENST00000406949 SCAND2PQ9GZW5 306 aaPredicted RBP14.04□□□□□ -0.16
PCNX4-204ENST00000406949 NCOA5Q9HCD5 579 aaKnown RBP14.04□□□□□ -0.16
PCNX4-204ENST00000406949 PCDH11XQ9BZA7 1347 aa14.04□□□□□ -0.16
PCNX4-204ENST00000406949 PCDH11YQ9BZA8 1340 aa14.04□□□□□ -0.16
PCNX4-204ENST00000406949 GOLGA6L6A8MZA4 724 aa14.03□□□□□ -0.16
PCNX4-204ENST00000406949 IDH1O75874 414 aaKnown RBP14.03□□□□□ -0.16
PCNX4-204ENST00000406949 PAXIP1Q6ZW49 1069 aaPredicted RBP14.03□□□□□ -0.16
PCNX4-204ENST00000406949 TRIM5Q9C035 493 aa14.03□□□□□ -0.16
PCNX4-204ENST00000406949 USP42Q9H9J4 1324 aaKnown RBP14.03□□□□□ -0.16
PCNX4-204ENST00000406949 LTN1O94822 1766 aa14.03□□□□□ -0.16
PCNX4-204ENST00000406949 GOLGA6L19H0YKK7 550 aa14.03□□□□□ -0.16
PCNX4-204ENST00000406949 ME1P48163 572 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms