RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SLC10A5Q5PT55 438 aa25.44■■□□□ 1.66
CHKB-201ENST00000406938 PA2G4Q9UQ80 394 aaKnown RBP25.43■■□□□ 1.66
CHKB-201ENST00000406938 KLHDC4Q8TBB5 520 aa25.42■■□□□ 1.66
CHKB-201ENST00000406938 GREM2Q9H772 168 aa25.42■■□□□ 1.66
CHKB-201ENST00000406938 TNRC6CQ9HCJ0 1690 aaKnown RBP25.42■■□□□ 1.66
CHKB-201ENST00000406938 SURF6O75683 361 aaKnown RBP25.41■■□□□ 1.66
CHKB-201ENST00000406938 C3orf67Q6ZVT6 689 aa25.41■■□□□ 1.66
CHKB-201ENST00000406938 NRXN2Q9P2S2 1712 aa25.41■■□□□ 1.66
CHKB-201ENST00000406938 CASZ1Q86V15 1759 aa25.41■■□□□ 1.66
CHKB-201ENST00000406938 RIC1Q4ADV7 1423 aa25.41■■□□□ 1.66
CHKB-201ENST00000406938 ST5P78524 1137 aa25.41■■□□□ 1.66
CHKB-201ENST00000406938 PTPN12Q05209 780 aaKnown RBP25.41■■□□□ 1.66
CHKB-201ENST00000406938 R3HDM1Q15032 1099 aaKnown RBP25.41■■□□□ 1.66
CHKB-201ENST00000406938 CCDC57Q2TAC2 916 aa25.41■■□□□ 1.66
CHKB-201ENST00000406938 SLC16A10Q8TF71 515 aa25.41■■□□□ 1.66
CHKB-201ENST00000406938 PARP3Q9Y6F1 533 aa25.41■■□□□ 1.66
CHKB-201ENST00000406938 NOP58Q9Y2X3 529 aaKnown RBP25.4■■□□□ 1.66
CHKB-201ENST00000406938 APBB1O00213 710 aa25.39■■□□□ 1.66
CHKB-201ENST00000406938 ITGA6P23229 1130 aa25.39■■□□□ 1.66
CHKB-201ENST00000406938 IFIT5Q13325 482 aaKnown RBP25.39■■□□□ 1.66
CHKB-201ENST00000406938 CCDC152Q4G0S7 254 aa25.39■■□□□ 1.66
CHKB-201ENST00000406938 COPRSQ9NQ92 184 aa25.39■■□□□ 1.66
CHKB-201ENST00000406938 PDZRN3Q9UPQ7 1066 aa25.39■■□□□ 1.66
CHKB-201ENST00000406938 SIL1Q9H173 461 aa25.38■■□□□ 1.65
CHKB-201ENST00000406938 RTL9Q8NET4 1388 aa25.38■■□□□ 1.65
CHKB-201ENST00000406938 NUCB1Q02818 461 aa25.37■■□□□ 1.65
CHKB-201ENST00000406938 SF3B3Q15393 1217 aaKnown RBP25.37■■□□□ 1.65
CHKB-201ENST00000406938 ANKRD45Q5TZF3 282 aa25.37■■□□□ 1.65
CHKB-201ENST00000406938 NLRP3Q96P20 1036 aa25.37■■□□□ 1.65
CHKB-201ENST00000406938 HSP90AB4PQ58FF6 505 aa25.37■■□□□ 1.65
CHKB-201ENST00000406938 SKAP1Q86WV1 359 aa25.37■■□□□ 1.65
CHKB-201ENST00000406938 ZNF594Q96JF6 807 aaPredicted RBP25.37■■□□□ 1.65
CHKB-201ENST00000406938 ANKRD18BA2A2Z9 1011 aa25.36■■□□□ 1.65
CHKB-201ENST00000406938 OS9Q13438 667 aaPredicted RBP25.36■■□□□ 1.65
CHKB-201ENST00000406938 LRP5O75197 1615 aa25.35■■□□□ 1.65
CHKB-201ENST00000406938 RAB11FIP3O75154 756 aa25.35■■□□□ 1.65
CHKB-201ENST00000406938 TAF7LQ5H9L4 462 aa25.34■■□□□ 1.65
CHKB-201ENST00000406938 CHD1LQ86WJ1 897 aa25.34■■□□□ 1.65
CHKB-201ENST00000406938 PSDA5PKW4 1024 aaPredicted RBP25.34■■□□□ 1.65
CHKB-201ENST00000406938 G3BP1Q13283 466 aaKnown RBP eCLIP25.34■■□□□ 1.65
CHKB-201ENST00000406938 LRRCC1Q9C099 1032 aa25.34■■□□□ 1.65
CHKB-201ENST00000406938 LNPKQ9C0E8 428 aa25.34■■□□□ 1.65
CHKB-201ENST00000406938 SEC31BQ9NQW1 1179 aa25.34■■□□□ 1.65
CHKB-201ENST00000406938 ZBTB7AO95365 584 aa25.33■■□□□ 1.65
CHKB-201ENST00000406938 SMARCA5O60264 1052 aaPredicted RBP25.32■■□□□ 1.64
CHKB-201ENST00000406938 ERC1Q8IUD2 1116 aa25.32■■□□□ 1.64
CHKB-201ENST00000406938 RHPN1Q8TCX5 695 aa25.32■■□□□ 1.64
CHKB-201ENST00000406938 KIF1BPQ96EK5 621 aa25.32■■□□□ 1.64
CHKB-201ENST00000406938 COL4A1P02462 1669 aa25.32■■□□□ 1.64
CHKB-201ENST00000406938 ZBTB47Q9UFB7 747 aaPredicted RBP25.31■■□□□ 1.64
CHKB-201ENST00000406938 ANKRD31Q8N7Z5 1873 aa25.31■■□□□ 1.64
CHKB-201ENST00000406938 EYA2O00167 538 aa25.3■■□□□ 1.64
CHKB-201ENST00000406938 LRRC24Q50LG9 513 aa25.3■■□□□ 1.64
CHKB-201ENST00000406938 BRIP1Q9BX63 1249 aa25.3■■□□□ 1.64
CHKB-201ENST00000406938 PUS3Q9BZE2 481 aaKnown RBP25.3■■□□□ 1.64
CHKB-201ENST00000406938 MTFR1LQ9H019 292 aa25.3■■□□□ 1.64
CHKB-201ENST00000406938 CIAO1O76071 339 aa25.3■■□□□ 1.64
CHKB-201ENST00000406938 SASH1O94885 1247 aa25.3■■□□□ 1.64
CHKB-201ENST00000406938 CRY2Q49AN0 593 aa25.3■■□□□ 1.64
CHKB-201ENST00000406938 ATG9AQ7Z3C6 839 aa25.3■■□□□ 1.64
CHKB-201ENST00000406938 BCL11AQ9H165 835 aa25.3■■□□□ 1.64
CHKB-201ENST00000406938 FBXO3Q9UK99 471 aa25.3■■□□□ 1.64
CHKB-201ENST00000406938 CDC5LQ99459 802 aaKnown RBP25.29■■□□□ 1.64
CHKB-201ENST00000406938 IL1RAPL2Q9NP60 686 aa25.29■■□□□ 1.64
CHKB-201ENST00000406938 PDE4AP27815 886 aa25.28■■□□□ 1.64
CHKB-201ENST00000406938 LDHAL6AQ6ZMR3 332 aa25.28■■□□□ 1.64
CHKB-201ENST00000406938 KLRG2A4D1S0 409 aaPredicted RBP25.27■■□□□ 1.64
CHKB-201ENST00000406938 IL15P40933 162 aaPredicted RBP25.27■■□□□ 1.64
CHKB-201ENST00000406938 DDX46Q7L014 1031 aaKnown RBP25.27■■□□□ 1.64
CHKB-201ENST00000406938 IGHMBP2P38935 993 aaKnown RBP25.26■■□□□ 1.63
CHKB-201ENST00000406938 RGS3P49796 1198 aa25.26■■□□□ 1.63
CHKB-201ENST00000406938 RPGRQ92834 1020 aaKnown RBP25.26■■□□□ 1.63
CHKB-201ENST00000406938 ATF5Q9Y2D1 282 aaPredicted RBP25.26■■□□□ 1.63
CHKB-201ENST00000406938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.26■■□□□ 1.63
CHKB-201ENST00000406938 ANKRD18AQ8IVF6 992 aa25.26■■□□□ 1.63
CHKB-201ENST00000406938 CELF1Q92879 486 aaKnown RBP25.26■■□□□ 1.63
CHKB-201ENST00000406938 MPHOSPH8Q99549 860 aa25.26■■□□□ 1.63
CHKB-201ENST00000406938 CNNM1Q9NRU3 951 aa25.26■■□□□ 1.63
CHKB-201ENST00000406938 SPEF2Q9C093 1822 aa25.25■■□□□ 1.63
CHKB-201ENST00000406938 C10orf71Q711Q0 1435 aa25.25■■□□□ 1.63
CHKB-201ENST00000406938 PDE6BP35913 854 aa25.25■■□□□ 1.63
CHKB-201ENST00000406938 TFCP2Q12800 502 aa25.25■■□□□ 1.63
CHKB-201ENST00000406938 RIPOR2Q9Y4F9 1068 aa25.25■■□□□ 1.63
CHKB-201ENST00000406938 COL11A2P13942 1736 aaPredicted RBP25.24■■□□□ 1.63
CHKB-201ENST00000406938 C16orf71Q8IYS4 520 aaPredicted RBP25.24■■□□□ 1.63
CHKB-201ENST00000406938 TAF1P21675 1872 aa25.24■■□□□ 1.63
CHKB-201ENST00000406938 POLD1P28340 1107 aa25.23■■□□□ 1.63
CHKB-201ENST00000406938 GRAPQ13588 217 aa25.23■■□□□ 1.63
CHKB-201ENST00000406938 CLASRPQ8N2M8 674 aaKnown RBP25.23■■□□□ 1.63
CHKB-201ENST00000406938 GRAPLQ8TC17 118 aaPredicted RBP25.23■■□□□ 1.63
CHKB-201ENST00000406938 OTUD7AQ8TE49 926 aaPredicted RBP25.23■■□□□ 1.63
CHKB-201ENST00000406938 HOXA10P31260 410 aaPredicted RBP25.22■■□□□ 1.63
CHKB-201ENST00000406938 RPS8P62241 208 aaKnown RBP25.22■■□□□ 1.63
CHKB-201ENST00000406938 RBM17Q96I25 401 aaKnown RBP25.22■■□□□ 1.63
CHKB-201ENST00000406938 SRGNP10124 158 aa25.21■■□□□ 1.63
CHKB-201ENST00000406938 METTL24Q5JXM2 366 aa25.21■■□□□ 1.63
CHKB-201ENST00000406938 BSDC1Q9NW68 430 aaPredicted RBP25.21■■□□□ 1.63
CHKB-201ENST00000406938 MROH5Q6ZUA9 1318 aa25.2■■□□□ 1.62
CHKB-201ENST00000406938 CEP126Q9P2H0 1117 aa25.2■■□□□ 1.62
CHKB-201ENST00000406938 TNNI3KQ59H18 835 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms