RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 AHDC1Q5TGY3 1603 aaPredicted RBP21.45■■□□□ 1.02
CHTOP-205ENST00000403433 RPAP1Q9BWH6 1393 aaPredicted RBP21.45■■□□□ 1.02
CHTOP-205ENST00000403433 TCIRG1Q13488 830 aa21.45■■□□□ 1.02
CHTOP-205ENST00000403433 ATG9AQ7Z3C6 839 aa21.45■■□□□ 1.02
CHTOP-205ENST00000403433 PANK2Q9BZ23 570 aa21.45■■□□□ 1.02
CHTOP-205ENST00000403433 GPR108Q9NPR9 543 aa21.45■■□□□ 1.02
CHTOP-205ENST00000403433 ATG3Q9NT62 314 aa21.45■■□□□ 1.02
CHTOP-205ENST00000403433 CAVIN1Q6NZI2 390 aaKnown RBP21.44■■□□□ 1.02
CHTOP-205ENST00000403433 ZSCAN31Q96LW9 406 aaPredicted RBP21.44■■□□□ 1.02
CHTOP-205ENST00000403433 SH2B1Q9NRF2 756 aaPredicted RBP21.44■■□□□ 1.02
CHTOP-205ENST00000403433 ZNF609O15014 1411 aa21.44■■□□□ 1.02
CHTOP-205ENST00000403433 EYA2O00167 538 aa21.43■■□□□ 1.02
CHTOP-205ENST00000403433 ZNF589Q86UQ0 364 aaPredicted RBP21.43■■□□□ 1.02
CHTOP-205ENST00000403433 GAS2L3Q86XJ1 694 aa21.43■■□□□ 1.02
CHTOP-205ENST00000403433 LARP6Q9BRS8 491 aaKnown RBP21.43■■□□□ 1.02
CHTOP-205ENST00000403433 RTN4Q9NQC3 1192 aaKnown RBP21.43■■□□□ 1.02
CHTOP-205ENST00000403433 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.43■■□□□ 1.02
CHTOP-205ENST00000403433 CIAO1O76071 339 aa21.43■■□□□ 1.02
CHTOP-205ENST00000403433 NEUROD6Q96NK8 337 aa21.43■■□□□ 1.02
CHTOP-205ENST00000403433 HMG20BQ9P0W2 317 aa21.43■■□□□ 1.02
CHTOP-205ENST00000403433 SMC3Q9UQE7 1217 aa21.43■■□□□ 1.02
CHTOP-205ENST00000403433 CHAMP1Q96JM3 812 aa21.42■■□□□ 1.02
CHTOP-205ENST00000403433 TRIM28Q13263 835 aaKnown RBP21.41■■□□□ 1.02
CHTOP-205ENST00000403433 NDUFB9Q9Y6M9 179 aa21.41■■□□□ 1.02
CHTOP-205ENST00000403433 BCL9O00512 1426 aa21.41■■□□□ 1.02
CHTOP-205ENST00000403433 TAF5LO75529 589 aa21.41■■□□□ 1.02
CHTOP-205ENST00000403433 GPT2Q8TD30 523 aa21.41■■□□□ 1.02
CHTOP-205ENST00000403433 CCDC9Q9Y3X0 531 aaKnown RBP21.41■■□□□ 1.02
CHTOP-205ENST00000403433 LARGE1O95461 756 aa21.4■■□□□ 1.02
CHTOP-205ENST00000403433 MBD3O95983 291 aa21.4■■□□□ 1.02
CHTOP-205ENST00000403433 ZNF445P59923 1031 aa21.4■■□□□ 1.02
CHTOP-205ENST00000403433 ZSCAN23Q3MJ62 389 aa21.4■■□□□ 1.02
CHTOP-205ENST00000403433 BLOC1S2Q6QNY1 142 aa21.4■■□□□ 1.02
CHTOP-205ENST00000403433 DDX46Q7L014 1031 aaKnown RBP21.4■■□□□ 1.02
CHTOP-205ENST00000403433 ZNF594Q96JF6 807 aaPredicted RBP21.4■■□□□ 1.02
CHTOP-205ENST00000403433 PALLDQ8WX93 1383 aa21.4■■□□□ 1.02
CHTOP-205ENST00000403433 ANKRD36CQ5JPF3 1778 aa21.4■■□□□ 1.02
CHTOP-205ENST00000403433 PCCAP05165 728 aaPredicted RBP21.39■■□□□ 1.02
CHTOP-205ENST00000403433 CCDC57Q2TAC2 916 aa21.39■■□□□ 1.02
CHTOP-205ENST00000403433 LRRC24Q50LG9 513 aa21.39■■□□□ 1.02
CHTOP-205ENST00000403433 CCDC83Q8IWF9 413 aa21.39■■□□□ 1.02
CHTOP-205ENST00000403433 KBTBD3Q8NAB2 608 aa21.39■■□□□ 1.02
CHTOP-205ENST00000403433 SPEF2Q9C093 1822 aa21.39■■□□□ 1.02
CHTOP-205ENST00000403433 MAP3K15Q6ZN16 1313 aa21.39■■□□□ 1.01
CHTOP-205ENST00000403433 EXOC5O00471 708 aa21.38■■□□□ 1.01
CHTOP-205ENST00000403433 ANKRD1Q15327 319 aa21.38■■□□□ 1.01
CHTOP-205ENST00000403433 MCMDC2Q4G0Z9 681 aa21.38■■□□□ 1.01
CHTOP-205ENST00000403433 PAG1Q9NWQ8 432 aa21.38■■□□□ 1.01
CHTOP-205ENST00000403433 SH3TC1Q8TE82 1336 aa21.38■■□□□ 1.01
CHTOP-205ENST00000403433 TIMM10P62072 90 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 KRT32Q14532 448 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 TSGA10IPQ3SY00 556 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 USPL1Q5W0Q7 1092 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 FBXO3Q9UK99 471 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 U3KPZ7 1027 aaPredicted RBP21.37■■□□□ 1.01
CHTOP-205ENST00000403433 DOT1LQ8TEK3 1739 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 GOLIM4O00461 696 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 STX6O43752 255 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 ZSCAN22P10073 491 aaPredicted RBP21.37■■□□□ 1.01
CHTOP-205ENST00000403433 RPS6KB1P23443 525 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 TICAM2Q86XR7 235 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 ZBTB38Q8NAP3 1195 aaPredicted RBP21.37■■□□□ 1.01
CHTOP-205ENST00000403433 PLA2G12BQ9BX93 195 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 CEP126Q9P2H0 1117 aa21.37■■□□□ 1.01
CHTOP-205ENST00000403433 A0A1B0GUL7 405 aa21.36■■□□□ 1.01
CHTOP-205ENST00000403433 SYT1P21579 422 aa21.36■■□□□ 1.01
CHTOP-205ENST00000403433 GIGYF2Q6Y7W6 1299 aaKnown RBP21.36■■□□□ 1.01
CHTOP-205ENST00000403433 KAT6BQ8WYB5 2073 aa21.35■■□□□ 1.01
CHTOP-205ENST00000403433 GJB2P29033 226 aa21.35■■□□□ 1.01
CHTOP-205ENST00000403433 ME3Q16798 604 aa21.35■■□□□ 1.01
CHTOP-205ENST00000403433 HSP90AB3PQ58FF7 597 aa21.35■■□□□ 1.01
CHTOP-205ENST00000403433 TAF7LQ5H9L4 462 aa21.35■■□□□ 1.01
CHTOP-205ENST00000403433 FAM43AQ8N2R8 423 aa21.35■■□□□ 1.01
CHTOP-205ENST00000403433 FAM89AQ96GI7 184 aa21.35■■□□□ 1.01
CHTOP-205ENST00000403433 ALDH8A1Q9H2A2 487 aaPredicted RBP21.35■■□□□ 1.01
CHTOP-205ENST00000403433 CYP19A1P11511 503 aaPredicted RBP21.35■■□□□ 1.01
CHTOP-205ENST00000403433 CCDC129Q6ZRS4 1044 aa21.35■■□□□ 1.01
CHTOP-205ENST00000403433 SYTL4Q96C24 671 aaPredicted RBP21.35■■□□□ 1.01
CHTOP-205ENST00000403433 PUS3Q9BZE2 481 aaKnown RBP21.35■■□□□ 1.01
CHTOP-205ENST00000403433 RBM27Q9P2N5 1060 aaKnown RBP21.35■■□□□ 1.01
CHTOP-205ENST00000403433 TPCN1Q9ULQ1 816 aa21.35■■□□□ 1.01
CHTOP-205ENST00000403433 IFIT1P09914 478 aaKnown RBP21.34■■□□□ 1.01
CHTOP-205ENST00000403433 FOXD4L6Q3SYB3 417 aaPredicted RBP21.34■■□□□ 1.01
CHTOP-205ENST00000403433 FOXD4L3Q6VB84 417 aaPredicted RBP21.34■■□□□ 1.01
CHTOP-205ENST00000403433 AKAP2Q9Y2D5 859 aa21.34■■□□□ 1.01
CHTOP-205ENST00000403433 IFIT5Q13325 482 aaKnown RBP21.33■■□□□ 1.01
CHTOP-205ENST00000403433 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.33■■□□□ 1.01
CHTOP-205ENST00000403433 SEC62Q99442 399 aaKnown RBP21.33■■□□□ 1.01
CHTOP-205ENST00000403433 HELLSQ9NRZ9 838 aa21.33■■□□□ 1.01
CHTOP-205ENST00000403433 ATP6V1DQ9Y5K8 247 aa21.33■■□□□ 1.01
CHTOP-205ENST00000403433 TAF6LQ9Y6J9 622 aa21.33■■□□□ 1.01
CHTOP-205ENST00000403433 MYH3P11055 1940 aa21.33■■□□□ 1.01
CHTOP-205ENST00000403433 CDHR2Q9BYE9 1310 aa21.33■■□□□ 1.01
CHTOP-205ENST00000403433 F13A1P00488 732 aa21.32■■□□□ 1
CHTOP-205ENST00000403433 CHGBP05060 677 aa21.32■■□□□ 1
CHTOP-205ENST00000403433 NASPP49321 788 aaPredicted RBP21.32■■□□□ 1
CHTOP-205ENST00000403433 ST3GAL1Q11201 340 aa21.32■■□□□ 1
CHTOP-205ENST00000403433 HLFQ16534 295 aa21.32■■□□□ 1
CHTOP-205ENST00000403433 NECAB1Q8N987 351 aa21.32■■□□□ 1
CHTOP-205ENST00000403433 SLC4A9Q96Q91 983 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms