RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 NBPF5PQ86XG9 351 aaPredicted RBP20.18■□□□□ 0.82
TNRC18-202ENST00000399434 TTLL11Q8NHH1 800 aa20.18■□□□□ 0.82
TNRC18-202ENST00000399434 NUCB1Q02818 461 aa20.17■□□□□ 0.82
TNRC18-202ENST00000399434 SLC10A5Q5PT55 438 aa20.17■□□□□ 0.82
TNRC18-202ENST00000399434 MSL1Q68DK7 614 aa20.17■□□□□ 0.82
TNRC18-202ENST00000399434 CCDC24Q8N4L8 307 aa20.17■□□□□ 0.82
TNRC18-202ENST00000399434 NYXQ9GZU5 481 aa20.17■□□□□ 0.82
TNRC18-202ENST00000399434 NOP58Q9Y2X3 529 aaKnown RBP20.17■□□□□ 0.82
TNRC18-202ENST00000399434 COL11A2P13942 1736 aaPredicted RBP20.16■□□□□ 0.82
TNRC18-202ENST00000399434 PTPN12Q05209 780 aaKnown RBP20.16■□□□□ 0.82
TNRC18-202ENST00000399434 PRR5LQ6MZQ0 368 aa20.16■□□□□ 0.82
TNRC18-202ENST00000399434 CCDC85AQ96PX6 553 aaPredicted RBP20.16■□□□□ 0.82
TNRC18-202ENST00000399434 GREM2Q9H772 168 aa20.16■□□□□ 0.82
TNRC18-202ENST00000399434 RTL9Q8NET4 1388 aa20.15■□□□□ 0.82
TNRC18-202ENST00000399434 PDE4AP27815 886 aa20.15■□□□□ 0.82
TNRC18-202ENST00000399434 COPRSQ9NQ92 184 aa20.15■□□□□ 0.82
TNRC18-202ENST00000399434 CHMP3Q9Y3E7 222 aa20.15■□□□□ 0.82
TNRC18-202ENST00000399434 SURF6O75683 361 aaKnown RBP20.14■□□□□ 0.81
TNRC18-202ENST00000399434 SERPINB2P05120 415 aa20.14■□□□□ 0.81
TNRC18-202ENST00000399434 NLGN1Q8N2Q7 840 aa20.14■□□□□ 0.81
TNRC18-202ENST00000399434 CNBD1Q8NA66 436 aa20.14■□□□□ 0.81
TNRC18-202ENST00000399434 SMARCA5O60264 1052 aaPredicted RBP20.13■□□□□ 0.81
TNRC18-202ENST00000399434 TPTE2Q6XPS3 522 aa20.13■□□□□ 0.81
TNRC18-202ENST00000399434 ZNF594Q96JF6 807 aaPredicted RBP20.13■□□□□ 0.81
TNRC18-202ENST00000399434 APBB1O00213 710 aa20.12■□□□□ 0.81
TNRC18-202ENST00000399434 ANKRD45Q5TZF3 282 aa20.12■□□□□ 0.81
TNRC18-202ENST00000399434 CHD1LQ86WJ1 897 aa20.12■□□□□ 0.81
TNRC18-202ENST00000399434 LNPKQ9C0E8 428 aa20.12■□□□□ 0.81
TNRC18-202ENST00000399434 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.12■□□□□ 0.81
TNRC18-202ENST00000399434 MMP10P09238 476 aa20.11■□□□□ 0.81
TNRC18-202ENST00000399434 SIL1Q9H173 461 aa20.11■□□□□ 0.81
TNRC18-202ENST00000399434 ITGA6P23229 1130 aa20.11■□□□□ 0.81
TNRC18-202ENST00000399434 SF3B3Q15393 1217 aaKnown RBP20.11■□□□□ 0.81
TNRC18-202ENST00000399434 SASH1O94885 1247 aa20.1■□□□□ 0.81
TNRC18-202ENST00000399434 GTF2E1P29083 439 aaPredicted RBP20.1■□□□□ 0.81
TNRC18-202ENST00000399434 ATG9AQ7Z3C6 839 aa20.1■□□□□ 0.81
TNRC18-202ENST00000399434 SEC31BQ9NQW1 1179 aa20.1■□□□□ 0.81
TNRC18-202ENST00000399434 RAB11FIP3O75154 756 aa20.09■□□□□ 0.81
TNRC18-202ENST00000399434 HSP90B1P14625 803 aaKnown RBP20.09■□□□□ 0.81
TNRC18-202ENST00000399434 IFIT5Q13325 482 aaKnown RBP20.09■□□□□ 0.81
TNRC18-202ENST00000399434 RHPN1Q8TCX5 695 aa20.09■□□□□ 0.81
TNRC18-202ENST00000399434 PUS3Q9BZE2 481 aaKnown RBP20.09■□□□□ 0.81
TNRC18-202ENST00000399434 CCDC57Q2TAC2 916 aa20.08■□□□□ 0.81
TNRC18-202ENST00000399434 CCDC152Q4G0S7 254 aa20.08■□□□□ 0.81
TNRC18-202ENST00000399434 LRRC24Q50LG9 513 aa20.08■□□□□ 0.81
TNRC18-202ENST00000399434 OTUD7AQ8TE49 926 aaPredicted RBP20.08■□□□□ 0.81
TNRC18-202ENST00000399434 LRRCC1Q9C099 1032 aa20.08■□□□□ 0.81
TNRC18-202ENST00000399434 KIF13BQ9NQT8 1826 aa20.07■□□□□ 0.8
TNRC18-202ENST00000399434 ANKRD18BA2A2Z9 1011 aa20.07■□□□□ 0.8
TNRC18-202ENST00000399434 RGS3P49796 1198 aa20.07■□□□□ 0.8
TNRC18-202ENST00000399434 HSP90AB4PQ58FF6 505 aa20.07■□□□□ 0.8
TNRC18-202ENST00000399434 C16orf71Q8IYS4 520 aaPredicted RBP20.07■□□□□ 0.8
TNRC18-202ENST00000399434 ARAP2Q8WZ64 1704 aa20.07■□□□□ 0.8
TNRC18-202ENST00000399434 EYA2O00167 538 aa20.06■□□□□ 0.8
TNRC18-202ENST00000399434 ST5P78524 1137 aa20.06■□□□□ 0.8
TNRC18-202ENST00000399434 R3HDM1Q15032 1099 aaKnown RBP20.06■□□□□ 0.8
TNRC18-202ENST00000399434 KIF1BPQ96EK5 621 aa20.06■□□□□ 0.8
TNRC18-202ENST00000399434 IL1RAPL2Q9NP60 686 aa20.06■□□□□ 0.8
TNRC18-202ENST00000399434 SALL3Q9BXA9 1300 aa20.06■□□□□ 0.8
TNRC18-202ENST00000399434 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
TNRC18-202ENST00000399434 LRRC37AA6NMS7 1700 aa20.06■□□□□ 0.8
TNRC18-202ENST00000399434 KIAA1551Q9HCM1 1747 aa20.06■□□□□ 0.8
TNRC18-202ENST00000399434 CIAO1O76071 339 aa20.05■□□□□ 0.8
TNRC18-202ENST00000399434 G3BP1Q13283 466 aaKnown RBP eCLIP20.05■□□□□ 0.8
TNRC18-202ENST00000399434 OS9Q13438 667 aaPredicted RBP20.05■□□□□ 0.8
TNRC18-202ENST00000399434 SLC16A10Q8TF71 515 aa20.05■□□□□ 0.8
TNRC18-202ENST00000399434 NLRP3Q96P20 1036 aa20.05■□□□□ 0.8
TNRC18-202ENST00000399434 PARP3Q9Y6F1 533 aa20.05■□□□□ 0.8
TNRC18-202ENST00000399434 CACNA1SQ13698 1873 aa20.05■□□□□ 0.8
TNRC18-202ENST00000399434 ZNF609O15014 1411 aa20.05■□□□□ 0.8
TNRC18-202ENST00000399434 NPHP1O15259 732 aa20.05■□□□□ 0.8
TNRC18-202ENST00000399434 CRY2Q49AN0 593 aa20.05■□□□□ 0.8
TNRC18-202ENST00000399434 ERC1Q8IUD2 1116 aa20.05■□□□□ 0.8
TNRC18-202ENST00000399434 C10orf71Q711Q0 1435 aa20.04■□□□□ 0.8
TNRC18-202ENST00000399434 KLRG2A4D1S0 409 aaPredicted RBP20.04■□□□□ 0.8
TNRC18-202ENST00000399434 RIPOR2Q9Y4F9 1068 aa20.04■□□□□ 0.8
TNRC18-202ENST00000399434 IL15P40933 162 aaPredicted RBP20.03■□□□□ 0.8
TNRC18-202ENST00000399434 TFCP2Q12800 502 aa20.03■□□□□ 0.8
TNRC18-202ENST00000399434 FBXO3Q9UK99 471 aa20.03■□□□□ 0.8
TNRC18-202ENST00000399434 TAF7LQ5H9L4 462 aa20.02■□□□□ 0.8
TNRC18-202ENST00000399434 PLEKHM2Q8IWE5 1019 aa20.02■□□□□ 0.8
TNRC18-202ENST00000399434 CELF1Q92879 486 aaKnown RBP20.02■□□□□ 0.8
TNRC18-202ENST00000399434 PSDA5PKW4 1024 aaPredicted RBP20.01■□□□□ 0.79
TNRC18-202ENST00000399434 ZBTB7AO95365 584 aa20.01■□□□□ 0.79
TNRC18-202ENST00000399434 VGLL2Q8N8G2 317 aa20.01■□□□□ 0.79
TNRC18-202ENST00000399434 BRIP1Q9BX63 1249 aa20.01■□□□□ 0.79
TNRC18-202ENST00000399434 BCL11AQ9H165 835 aa20.01■□□□□ 0.79
TNRC18-202ENST00000399434 LTBP1Q14766 1721 aa20■□□□□ 0.79
TNRC18-202ENST00000399434 SLC51AQ86UW1 340 aa20■□□□□ 0.79
TNRC18-202ENST00000399434 EAF2Q96CJ1 260 aaPredicted RBP20■□□□□ 0.79
TNRC18-202ENST00000399434 LDHAL6AQ6ZMR3 332 aa19.99■□□□□ 0.79
TNRC18-202ENST00000399434 CDC5LQ99459 802 aaKnown RBP19.99■□□□□ 0.79
TNRC18-202ENST00000399434 TLR7Q9NYK1 1049 aaKnown RBP19.99■□□□□ 0.79
TNRC18-202ENST00000399434 TNNI3KQ59H18 835 aa19.99■□□□□ 0.79
TNRC18-202ENST00000399434 FPGT-TNNI3KV9GXZ4 949 aa19.99■□□□□ 0.79
TNRC18-202ENST00000399434 HOXA10P31260 410 aaPredicted RBP19.98■□□□□ 0.79
TNRC18-202ENST00000399434 TSHZ3Q63HK5 1081 aa19.98■□□□□ 0.79
TNRC18-202ENST00000399434 AACSQ86V21 672 aa19.98■□□□□ 0.79
TNRC18-202ENST00000399434 ANKRD18AQ8IVF6 992 aa19.98■□□□□ 0.79
TNRC18-202ENST00000399434 MTFR1LQ9H019 292 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms