RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 JAK2O60674 1132 aa16.5■□□□□ 0.23
APOB-202ENST00000399256 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
APOB-202ENST00000399256 RPS6KB1P23443 525 aa16.5■□□□□ 0.23
APOB-202ENST00000399256 CEBPZQ03701 1054 aaKnown RBP16.5■□□□□ 0.23
APOB-202ENST00000399256 CCDC8Q9H0W5 538 aaPredicted RBP16.5■□□□□ 0.23
APOB-202ENST00000399256 GOLGA6L19H0YKK7 550 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 KCNQ3O43525 872 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 C11orf57Q6ZUT1 292 aaPredicted RBP16.49■□□□□ 0.23
APOB-202ENST00000399256 LRRC8AQ8IWT6 810 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 KIF18AQ8NI77 898 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 C9orf78Q9NZ63 289 aaPredicted RBP16.49■□□□□ 0.23
APOB-202ENST00000399256 HOXC9P31274 260 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 NLRP6P59044 892 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 ANKRD1Q15327 319 aa16.49■□□□□ 0.23
APOB-202ENST00000399256 ADCY9O60503 1353 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 A0A087WWV3 80 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 ZNF215Q9UL58 517 aaPredicted RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 PROSER2Q86WR7 435 aaPredicted RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 FSD1Q9BTV5 496 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 BOLA2Q9H3K6 86 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 BABAM1Q9NWV8 329 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 TRMT1Q9NXH9 659 aaKnown RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 TLR7Q9NYK1 1049 aaKnown RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 GABPB1Q06547 395 aaPredicted RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 BRF1Q92994 677 aa16.48■□□□□ 0.23
APOB-202ENST00000399256 MORC2Q9Y6X9 1032 aaPredicted RBP16.48■□□□□ 0.23
APOB-202ENST00000399256 CDC25BP30305 580 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 FOSBP53539 338 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 RNF20Q5VTR2 975 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 LGR6Q9HBX8 967 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 IQCB1Q15051 598 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 PTPN14Q15678 1187 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 KMT5BQ4FZB7 885 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 FILIP1Q7Z7B0 1213 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 EAF2Q96CJ1 260 aaPredicted RBP16.47■□□□□ 0.23
APOB-202ENST00000399256 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
APOB-202ENST00000399256 SLFN14P0C7P3 912 aa16.46■□□□□ 0.23
APOB-202ENST00000399256 SKILP12757 684 aa16.46■□□□□ 0.23
APOB-202ENST00000399256 RESTQ13127 1097 aa16.46■□□□□ 0.23
APOB-202ENST00000399256 ZNF589Q86UQ0 364 aaPredicted RBP16.46■□□□□ 0.23
APOB-202ENST00000399256 MTX1Q13505 466 aa16.46■□□□□ 0.23
APOB-202ENST00000399256 CWF19L2Q2TBE0 894 aaKnown RBP16.46■□□□□ 0.23
APOB-202ENST00000399256 ERC1Q8IUD2 1116 aa16.46■□□□□ 0.23
APOB-202ENST00000399256 H3BQV1 296 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 HIP1O00291 1037 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 IFFO2Q5TF58 517 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 MAP3K2Q9Y2U5 619 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 ZNF397Q8NF99 534 aaPredicted RBP16.45■□□□□ 0.22
APOB-202ENST00000399256 FBXW7Q969H0 707 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 SASH1O94885 1247 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
APOB-202ENST00000399256 ELF2Q15723 593 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 FTOQ9C0B1 505 aaKnown RBP eCLIP16.45■□□□□ 0.22
APOB-202ENST00000399256 SIL1Q9H173 461 aa16.45■□□□□ 0.22
APOB-202ENST00000399256 NPHP1O15259 732 aa16.44■□□□□ 0.22
APOB-202ENST00000399256 KRT222Q8N1A0 295 aa16.44■□□□□ 0.22
APOB-202ENST00000399256 EDC3Q96F86 508 aaKnown RBP16.44■□□□□ 0.22
APOB-202ENST00000399256 TMEM94Q12767 1356 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 BECN2A8MW95 431 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 RBM6P78332 1123 aaKnown RBP16.43■□□□□ 0.22
APOB-202ENST00000399256 SARM1Q6SZW1 724 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 NYAP1Q6ZVC0 841 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 GTF3C6Q969F1 213 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 MRFAP1L1Q96HT8 127 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 STX1AQ16623 288 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 FBXO38Q6PIJ6 1188 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 CCZ1BP86790 482 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 CCZ1P86791 482 aaPredicted RBP16.43■□□□□ 0.22
APOB-202ENST00000399256 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
APOB-202ENST00000399256 CCAR1Q8IX12 1150 aaKnown RBP16.43■□□□□ 0.22
APOB-202ENST00000399256 ERCC4Q92889 916 aaPredicted RBP16.43■□□□□ 0.22
APOB-202ENST00000399256 GOLPH3LQ9H4A5 285 aa16.43■□□□□ 0.22
APOB-202ENST00000399256 PROSER3Q2NL68 480 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 MED23Q9ULK4 1368 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 CAVIN2O95810 425 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 TERF2Q15554 542 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 SUCLG2Q96I99 432 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 LRRC2Q9BYS8 371 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 ALDH8A1Q9H2A2 487 aaPredicted RBP16.42■□□□□ 0.22
APOB-202ENST00000399256 PIK3C2AO00443 1686 aa16.42■□□□□ 0.22
APOB-202ENST00000399256 NEMFO60524 1076 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 Q6ZUG5 572 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 SNRKQ9NRH2 765 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 XIRP1Q702N8 1843 aaKnown RBP16.41■□□□□ 0.22
APOB-202ENST00000399256 GIGYF1O75420 1035 aaPredicted RBP16.41■□□□□ 0.22
APOB-202ENST00000399256 KLHDC4Q8TBB5 520 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 BICC1Q9H694 974 aaKnown RBP16.41■□□□□ 0.22
APOB-202ENST00000399256 ST7Q9NRC1 585 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 BTBD11A6QL63 1104 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 DHX40Q8IX18 779 aaKnown RBP16.41■□□□□ 0.22
APOB-202ENST00000399256 CCAR2Q8N163 923 aaKnown RBP16.41■□□□□ 0.22
APOB-202ENST00000399256 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
APOB-202ENST00000399256 CEMIPQ8WUJ3 1361 aa16.4■□□□□ 0.22
APOB-202ENST00000399256 TAF3Q5VWG9 929 aa16.4■□□□□ 0.22
APOB-202ENST00000399256 C19orf44Q9H6X5 657 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms