RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
PUM3-202ENST00000397885 MRFAP1L1Q96HT8 127 aa13.53□□□□□ -0.24
PUM3-202ENST00000397885 NUP62CLQ9H1M0 184 aa13.53□□□□□ -0.24
PUM3-202ENST00000397885 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
PUM3-202ENST00000397885 BTG4Q9NY30 223 aa13.53□□□□□ -0.24
PUM3-202ENST00000397885 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.53□□□□□ -0.24
PUM3-202ENST00000397885 CEP83Q9Y592 693 aa13.53□□□□□ -0.24
PUM3-202ENST00000397885 TRIM66O15016 1216 aa13.52□□□□□ -0.24
PUM3-202ENST00000397885 RBM43Q6ZSC3 357 aaKnown RBP13.52□□□□□ -0.24
PUM3-202ENST00000397885 LUZP1Q86V48 1076 aa13.52□□□□□ -0.24
PUM3-202ENST00000397885 CCAR2Q8N163 923 aaKnown RBP13.52□□□□□ -0.24
PUM3-202ENST00000397885 SMARCE1Q969G3 411 aa13.52□□□□□ -0.24
PUM3-202ENST00000397885 ESYT1Q9BSJ8 1104 aa13.52□□□□□ -0.24
PUM3-202ENST00000397885 PRDM11Q9NQV5 511 aa13.52□□□□□ -0.24
PUM3-202ENST00000397885 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.25
PUM3-202ENST00000397885 CCDC172P0C7W6 258 aa13.52□□□□□ -0.25
PUM3-202ENST00000397885 TTC31Q49AM3 519 aaPredicted RBP13.52□□□□□ -0.25
PUM3-202ENST00000397885 SWT1Q5T5J6 900 aaKnown RBP13.52□□□□□ -0.25
PUM3-202ENST00000397885 FIBPO43427 364 aa13.51□□□□□ -0.25
PUM3-202ENST00000397885 ATP2B1P20020 1258 aa13.51□□□□□ -0.25
PUM3-202ENST00000397885 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
PUM3-202ENST00000397885 SUGP1Q8IWZ8 645 aaKnown RBP13.51□□□□□ -0.25
PUM3-202ENST00000397885 DEF6Q9H4E7 631 aa13.51□□□□□ -0.25
PUM3-202ENST00000397885 USP6P35125 1406 aa13.51□□□□□ -0.25
PUM3-202ENST00000397885 SKILP12757 684 aa13.51□□□□□ -0.25
PUM3-202ENST00000397885 SYT1P21579 422 aa13.51□□□□□ -0.25
PUM3-202ENST00000397885 ERCC6LQ2NKX8 1250 aa13.51□□□□□ -0.25
PUM3-202ENST00000397885 CCDC125Q86Z20 511 aa13.51□□□□□ -0.25
PUM3-202ENST00000397885 CHMP4CQ96CF2 233 aa13.51□□□□□ -0.25
PUM3-202ENST00000397885 SRRTQ9BXP5 876 aaKnown RBP13.51□□□□□ -0.25
PUM3-202ENST00000397885 ATP10DQ9P241 1426 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 KIF1CO43896 1103 aaKnown RBP13.5□□□□□ -0.25
PUM3-202ENST00000397885 KCNJ6P48051 423 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 DHX8Q14562 1220 aaKnown RBP13.5□□□□□ -0.25
PUM3-202ENST00000397885 CCDC91Q7Z6B0 441 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 CEP120Q8N960 986 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 LCMT1Q9UIC8 334 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 CCDC144BQ3MJ40 725 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 ANO6Q4KMQ2 910 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 CCDC144CPQ8IYA2 1237 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 SEPT12Q8IYM1 358 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 MNS1Q8NEH6 495 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 OTUD7AQ8TE49 926 aaPredicted RBP13.5□□□□□ -0.25
PUM3-202ENST00000397885 DDX19AQ9NUU7 478 aaKnown RBP13.5□□□□□ -0.25
PUM3-202ENST00000397885 KIAA0232Q92628 1395 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
PUM3-202ENST00000397885 BRWD3Q6RI45 1802 aa13.49□□□□□ -0.25
PUM3-202ENST00000397885 USP27XA6NNY8 438 aa13.49□□□□□ -0.25
PUM3-202ENST00000397885 RPS6KA5O75582 802 aa13.49□□□□□ -0.25
PUM3-202ENST00000397885 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
PUM3-202ENST00000397885 ACTN2P35609 894 aa13.49□□□□□ -0.25
PUM3-202ENST00000397885 ST5P78524 1137 aa13.49□□□□□ -0.25
PUM3-202ENST00000397885 ARHGAP29Q52LW3 1261 aa13.49□□□□□ -0.25
PUM3-202ENST00000397885 PALD1Q9ULE6 856 aa13.49□□□□□ -0.25
PUM3-202ENST00000397885 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.49□□□□□ -0.258e-7■■■□□ 19.1
PUM3-202ENST00000397885 NRKQ7Z2Y5 1582 aa13.49□□□□□ -0.25
PUM3-202ENST00000397885 POLR3GO15318 223 aaPredicted RBP13.48□□□□□ -0.25
PUM3-202ENST00000397885 GYS2P54840 703 aa13.48□□□□□ -0.25
PUM3-202ENST00000397885 GSCP56915 257 aaPredicted RBP13.48□□□□□ -0.25
PUM3-202ENST00000397885 ZC3H6P61129 1189 aaKnown RBP13.48□□□□□ -0.25
PUM3-202ENST00000397885 PPM1EQ8WY54 764 aa13.48□□□□□ -0.25
PUM3-202ENST00000397885 DONSONQ9NYP3 566 aa13.48□□□□□ -0.25
PUM3-202ENST00000397885 GSDMDP57764 484 aa13.48□□□□□ -0.25
PUM3-202ENST00000397885 RPAINQ86UA6 219 aa13.48□□□□□ -0.25
PUM3-202ENST00000397885 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.48□□□□□ -0.25
PUM3-202ENST00000397885 BANK1Q8NDB2 785 aa13.48□□□□□ -0.25
PUM3-202ENST00000397885 TMX1Q9H3N1 280 aa13.48□□□□□ -0.25
PUM3-202ENST00000397885 ORC3Q9UBD5 711 aaPredicted RBP13.48□□□□□ -0.25
PUM3-202ENST00000397885 TTC21BQ7Z4L5 1316 aa13.48□□□□□ -0.25
PUM3-202ENST00000397885 CPDO75976 1380 aa13.48□□□□□ -0.25
PUM3-202ENST00000397885 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
PUM3-202ENST00000397885 OAS2P29728 719 aaKnown RBP13.47□□□□□ -0.25
PUM3-202ENST00000397885 CCZ1BP86790 482 aa13.47□□□□□ -0.25
PUM3-202ENST00000397885 CCZ1P86791 482 aaPredicted RBP13.47□□□□□ -0.25
PUM3-202ENST00000397885 CCDC158Q5M9N0 1113 aa13.47□□□□□ -0.25
PUM3-202ENST00000397885 UBXN4Q92575 508 aa13.47□□□□□ -0.25
PUM3-202ENST00000397885 TNMDQ9H2S6 317 aa13.47□□□□□ -0.25
PUM3-202ENST00000397885 EDC4Q6P2E9 1401 aaKnown RBP13.47□□□□□ -0.25
PUM3-202ENST00000397885 SPATA31A5Q5VU36 1347 aa13.47□□□□□ -0.25
PUM3-202ENST00000397885 SPATA31A7Q8IWB4 1347 aa13.47□□□□□ -0.25
PUM3-202ENST00000397885 MAP2P11137 1827 aaKnown RBP13.47□□□□□ -0.25
PUM3-202ENST00000397885 CASTP20810 708 aaKnown RBP13.47□□□□□ -0.25
PUM3-202ENST00000397885 ZNF165P49910 485 aa13.47□□□□□ -0.25
PUM3-202ENST00000397885 PDE1AP54750 535 aa13.47□□□□□ -0.25
PUM3-202ENST00000397885 SNW1Q13573 536 aaKnown RBP13.47□□□□□ -0.25
PUM3-202ENST00000397885 TWISTNBQ3B726 338 aaPredicted RBP13.47□□□□□ -0.25
PUM3-202ENST00000397885 REXO1L1PQ8IX06 675 aa13.47□□□□□ -0.25
PUM3-202ENST00000397885 CARD10Q9BWT7 1032 aa13.47□□□□□ -0.25
PUM3-202ENST00000397885 SMC3Q9UQE7 1217 aa13.47□□□□□ -0.25
PUM3-202ENST00000397885 CPP00450 1065 aa13.46□□□□□ -0.25
PUM3-202ENST00000397885 GCP02774 474 aa13.46□□□□□ -0.25
PUM3-202ENST00000397885 HMOX1P09601 288 aa13.46□□□□□ -0.25
PUM3-202ENST00000397885 NLRP6P59044 892 aa13.46□□□□□ -0.25
PUM3-202ENST00000397885 SMC1AQ14683 1233 aaKnown RBP13.46□□□□□ -0.25
PUM3-202ENST00000397885 CHRNA2Q15822 529 aa13.46□□□□□ -0.25
PUM3-202ENST00000397885 CEP85Q6P2H3 762 aa13.46□□□□□ -0.25
PUM3-202ENST00000397885 LEKR1Q6ZMV7 388 aa13.46□□□□□ -0.25
PUM3-202ENST00000397885 CEP89Q96ST8 783 aa13.46□□□□□ -0.25
PUM3-202ENST00000397885 MBIPQ9NS73 344 aa13.46□□□□□ -0.25
PUM3-202ENST00000397885 CCDC69A6NI79 296 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms