RNA–Protein interactions for RNA: ENST00000396741.3

CYTH3-202, Transcript of cytohesin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CYTH3, Length 4,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-202ENST00000396741 ANO6Q4KMQ2 910 aa17.21■□□□□ 0.35
CYTH3-202ENST00000396741 ZSCAN29Q8IWY8 852 aaPredicted RBP17.21■□□□□ 0.35
CYTH3-202ENST00000396741 NCOA7Q8NI08 942 aa17.21■□□□□ 0.35
CYTH3-202ENST00000396741 CPLX3Q8WVH0 158 aa17.21■□□□□ 0.35
CYTH3-202ENST00000396741 TMEM2Q9UHN6 1383 aa17.21■□□□□ 0.34
CYTH3-202ENST00000396741 IL15P40933 162 aaPredicted RBP17.2■□□□□ 0.34
CYTH3-202ENST00000396741 METAP2P50579 478 aaKnown RBP eCLIP17.2■□□□□ 0.34
CYTH3-202ENST00000396741 CAGE1Q8TC20 777 aa17.2■□□□□ 0.34
CYTH3-202ENST00000396741 CCDC43Q96MW1 224 aaKnown RBP17.2■□□□□ 0.34
CYTH3-202ENST00000396741 DNAJC25Q9H1X3 360 aa17.2■□□□□ 0.34
CYTH3-202ENST00000396741 MKNK2Q9HBH9 465 aa17.2■□□□□ 0.34
CYTH3-202ENST00000396741 SNX14Q9Y5W7 946 aa17.2■□□□□ 0.34
CYTH3-202ENST00000396741 EPS15P42566 896 aa17.2■□□□□ 0.34
CYTH3-202ENST00000396741 SIRT2Q8IXJ6 389 aa17.2■□□□□ 0.34
CYTH3-202ENST00000396741 PRDM15P57071 1507 aaPredicted RBP17.2■□□□□ 0.34
CYTH3-202ENST00000396741 SGSM2O43147 1006 aa17.2■□□□□ 0.34
CYTH3-202ENST00000396741 CNNM3Q8NE01 707 aa17.2■□□□□ 0.34
CYTH3-202ENST00000396741 MAGEC2Q9UBF1 373 aaPredicted RBP17.2■□□□□ 0.34
CYTH3-202ENST00000396741 MCM5P33992 734 aa17.2■□□□□ 0.34
CYTH3-202ENST00000396741 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
CYTH3-202ENST00000396741 ZPR1O75312 459 aa17.19■□□□□ 0.34
CYTH3-202ENST00000396741 KRT18P05783 430 aaKnown RBP17.19■□□□□ 0.34
CYTH3-202ENST00000396741 CLCN1P35523 988 aa17.19■□□□□ 0.34
CYTH3-202ENST00000396741 SOGA3Q5TF21 947 aa17.19■□□□□ 0.34
CYTH3-202ENST00000396741 NGLY1Q96IV0 654 aa17.19■□□□□ 0.34
CYTH3-202ENST00000396741 TRPM2O94759 1503 aa17.19■□□□□ 0.34
CYTH3-202ENST00000396741 PTPN14Q15678 1187 aa17.19■□□□□ 0.34
CYTH3-202ENST00000396741 MTERF4Q7Z6M4 381 aaKnown RBP17.19■□□□□ 0.34
CYTH3-202ENST00000396741 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
CYTH3-202ENST00000396741 ZNF652Q9Y2D9 606 aa17.19■□□□□ 0.34
CYTH3-202ENST00000396741 DZIP1Q86YF9 867 aaKnown RBP17.19■□□□□ 0.34
CYTH3-202ENST00000396741 WASF1Q92558 559 aa17.19■□□□□ 0.34
CYTH3-202ENST00000396741 RUFY3Q7L099 469 aa17.18■□□□□ 0.34
CYTH3-202ENST00000396741 CCDC186Q7Z3E2 898 aa17.18■□□□□ 0.34
CYTH3-202ENST00000396741 IQCA1Q86XH1 822 aa17.18■□□□□ 0.34
CYTH3-202ENST00000396741 UNC5CLQ8IV45 518 aa17.18■□□□□ 0.34
CYTH3-202ENST00000396741 SMTNL1A8MU46 457 aa17.18■□□□□ 0.34
CYTH3-202ENST00000396741 TNNT1P13805 278 aa17.18■□□□□ 0.34
CYTH3-202ENST00000396741 PRDM10Q9NQV6 1147 aa17.18■□□□□ 0.34
CYTH3-202ENST00000396741 GADD45BO75293 160 aaPredicted RBP17.18■□□□□ 0.34
CYTH3-202ENST00000396741 CTCFLQ8NI51 663 aaPredicted RBP17.18■□□□□ 0.34
CYTH3-202ENST00000396741 SMARCE1Q969G3 411 aa17.18■□□□□ 0.34
CYTH3-202ENST00000396741 SSRP1Q08945 709 aaKnown RBP17.17■□□□□ 0.34
CYTH3-202ENST00000396741 PPP1R1BQ9UD71 204 aaPredicted RBP17.17■□□□□ 0.34
CYTH3-202ENST00000396741 MFSD6Q6ZSS7 791 aa17.17■□□□□ 0.34
CYTH3-202ENST00000396741 NCOA5Q9HCD5 579 aaKnown RBP17.17■□□□□ 0.34
CYTH3-202ENST00000396741 INTS4Q96HW7 963 aaKnown RBP17.17■□□□□ 0.34
CYTH3-202ENST00000396741 TANGO6Q9C0B7 1094 aa17.17■□□□□ 0.34
CYTH3-202ENST00000396741 IL2RBP14784 551 aa17.17■□□□□ 0.34
CYTH3-202ENST00000396741 TEX35Q5T0J7 233 aa17.17■□□□□ 0.34
CYTH3-202ENST00000396741 TMC6Q7Z403 805 aa17.17■□□□□ 0.34
CYTH3-202ENST00000396741 PRC1O43663 620 aa17.16■□□□□ 0.34
CYTH3-202ENST00000396741 CCDC196A0A1B0GTZ2 297 aa17.16■□□□□ 0.34
CYTH3-202ENST00000396741 PDCL2Q8N4E4 241 aa17.16■□□□□ 0.34
CYTH3-202ENST00000396741 MIGA1Q8NAN2 632 aa17.16■□□□□ 0.34
CYTH3-202ENST00000396741 SIRT1Q96EB6 747 aa17.16■□□□□ 0.34
CYTH3-202ENST00000396741 TEX13AQ9BXU3 409 aaPredicted RBP17.16■□□□□ 0.34
CYTH3-202ENST00000396741 DACH1Q9UI36 760 aa17.16■□□□□ 0.34
CYTH3-202ENST00000396741 JAG2Q9Y219 1238 aa17.16■□□□□ 0.34
CYTH3-202ENST00000396741 HSP90B2PQ58FF3 399 aa17.16■□□□□ 0.34
CYTH3-202ENST00000396741 PROSER3Q2NL68 480 aa17.15■□□□□ 0.34
CYTH3-202ENST00000396741 ALG1Q9BT22 464 aa17.15■□□□□ 0.34
CYTH3-202ENST00000396741 CBFA2T2O43439 604 aa17.15■□□□□ 0.34
CYTH3-202ENST00000396741 CBX1P83916 185 aa17.15■□□□□ 0.34
CYTH3-202ENST00000396741 VAT1LQ9HCJ6 419 aa17.15■□□□□ 0.34
CYTH3-202ENST00000396741 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
CYTH3-202ENST00000396741 A0A1B0GUL7 405 aa17.15■□□□□ 0.34
CYTH3-202ENST00000396741 PRAMEF22A3QJZ6 481 aa17.15■□□□□ 0.34
CYTH3-202ENST00000396741 CDC42BPAQ5VT25 1732 aa17.15■□□□□ 0.34
CYTH3-202ENST00000396741 OTUD7BQ6GQQ9 843 aa17.15■□□□□ 0.34
CYTH3-202ENST00000396741 LUZP1Q86V48 1076 aa17.15■□□□□ 0.34
CYTH3-202ENST00000396741 CROCC2H7BZ55 1655 aa17.14■□□□□ 0.33
CYTH3-202ENST00000396741 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
CYTH3-202ENST00000396741 URI1O94763 535 aaPredicted RBP17.14■□□□□ 0.33
CYTH3-202ENST00000396741 ZSCAN16Q9H4T2 348 aaPredicted RBP17.14■□□□□ 0.33
CYTH3-202ENST00000396741 ZBTB43O43298 467 aa17.14■□□□□ 0.33
CYTH3-202ENST00000396741 RRP9O43818 475 aaKnown RBP17.14■□□□□ 0.33
CYTH3-202ENST00000396741 ATP6V1AP38606 617 aa17.14■□□□□ 0.33
CYTH3-202ENST00000396741 METTL22Q9BUU2 404 aaPredicted RBP17.14■□□□□ 0.33
CYTH3-202ENST00000396741 SLC27A2O14975 620 aa17.14■□□□□ 0.33
CYTH3-202ENST00000396741 TOP1P11387 765 aaKnown RBP17.14■□□□□ 0.33
CYTH3-202ENST00000396741 TNNI3KQ59H18 835 aa17.14■□□□□ 0.33
CYTH3-202ENST00000396741 FAM200AQ8TCP9 573 aa17.14■□□□□ 0.33
CYTH3-202ENST00000396741 EAF2Q96CJ1 260 aaPredicted RBP17.14■□□□□ 0.33
CYTH3-202ENST00000396741 FPGT-TNNI3KV9GXZ4 949 aa17.14■□□□□ 0.33
CYTH3-202ENST00000396741 PREX2Q70Z35 1606 aa17.14■□□□□ 0.33
CYTH3-202ENST00000396741 GIGYF1O75420 1035 aaPredicted RBP17.13■□□□□ 0.33
CYTH3-202ENST00000396741 CYP7A1P22680 504 aa17.13■□□□□ 0.33
CYTH3-202ENST00000396741 GCKRQ14397 625 aa17.13■□□□□ 0.33
CYTH3-202ENST00000396741 STX1AQ16623 288 aa17.13■□□□□ 0.33
CYTH3-202ENST00000396741 LMBRD1Q9NUN5 540 aa17.13■□□□□ 0.33
CYTH3-202ENST00000396741 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
CYTH3-202ENST00000396741 ROBO2Q9HCK4 1378 aa17.13■□□□□ 0.33
CYTH3-202ENST00000396741 CTAGE5O15320 804 aa17.13■□□□□ 0.33
CYTH3-202ENST00000396741 NLRP5P59047 1200 aa17.13■□□□□ 0.33
CYTH3-202ENST00000396741 TYRO3Q06418 890 aa17.13■□□□□ 0.33
CYTH3-202ENST00000396741 STIM1Q13586 685 aa17.13■□□□□ 0.33
CYTH3-202ENST00000396741 TTF1Q15361 905 aaPredicted RBP17.13■□□□□ 0.33
CYTH3-202ENST00000396741 TMEM63CQ9P1W3 806 aa17.13■□□□□ 0.33
CYTH3-202ENST00000396741 ZKSCAN5Q9Y2L8 839 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms