RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 LRP2BPQ9P2M1 347 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 PPFIA1Q13136 1202 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 SNW1Q13573 536 aaKnown RBP9.25□□□□□ -0.93
SOX6-202ENST00000396356 SPECC1Q5M775 1068 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 VCX3BQ9H321 246 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 UBE2Q2Q8WVN8 375 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 CTNNBL1Q8WYA6 563 aaPredicted RBP9.25□□□□□ -0.93
SOX6-202ENST00000396356 GOLGA1Q92805 767 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 GOLGA8QA0A0J9YX86 632 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 GOLGA8OA6NCC3 632 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 GOLGA8NF8WBI6 632 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 TBCAO75347 108 aaKnown RBP9.25□□□□□ -0.93
SOX6-202ENST00000396356 TRPC3Q13507 836 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 RSRC1Q96IZ7 334 aaKnown RBP9.25□□□□□ -0.93
SOX6-202ENST00000396356 SEC62Q99442 399 aaKnown RBP9.25□□□□□ -0.93
SOX6-202ENST00000396356 RBM28Q9NW13 759 aaKnown RBP9.25□□□□□ -0.93
SOX6-202ENST00000396356 ABCD1P33897 745 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 IFIT5Q13325 482 aaKnown RBP9.25□□□□□ -0.93
SOX6-202ENST00000396356 TAF7Q15545 349 aaPredicted RBP9.25□□□□□ -0.93
SOX6-202ENST00000396356 FCHSD1Q86WN1 690 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 TRPM2O94759 1503 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 SETDB1Q15047 1291 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 TNPO1Q92973 898 aaKnown RBP9.25□□□□□ -0.93
SOX6-202ENST00000396356 NCAPGQ9BPX3 1015 aa9.25□□□□□ -0.93
SOX6-202ENST00000396356 BUB1BO60566 1050 aaPredicted RBP9.24□□□□□ -0.93
SOX6-202ENST00000396356 GMNNO75496 209 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 RPL13P26373 211 aaKnown RBP9.24□□□□□ -0.93
SOX6-202ENST00000396356 SSR1P43307 286 aaKnown RBP9.24□□□□□ -0.93
SOX6-202ENST00000396356 TNNC1P63316 161 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 PIK3C2GO75747 1445 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 DZIP1Q86YF9 867 aaKnown RBP9.24□□□□□ -0.93
SOX6-202ENST00000396356 DKC1O60832 514 aaKnown RBP eCLIP9.24□□□□□ -0.93
SOX6-202ENST00000396356 GAS8O95995 478 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 APOBRQ0VD83 1088 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 TRIML1Q8N9V2 468 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 ADGRL1O94910 1474 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 BTBD11A6QL63 1104 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 EBAG9O00559 213 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 RASSF2P50749 326 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 NCBP1Q09161 790 aaKnown RBP9.24□□□□□ -0.93
SOX6-202ENST00000396356 RAB3IPQ96QF0 476 aaPredicted RBP9.24□□□□□ -0.93
SOX6-202ENST00000396356 UTP14AQ9BVJ6 771 aaKnown RBP9.24□□□□□ -0.93
SOX6-202ENST00000396356 ECHDC1Q9NTX5 307 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 CNNM3Q8NE01 707 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 CTAGE15A4D2H0 777 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 CTAGE8P0CG41 777 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 CTAGE6Q86UF2 777 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 CTAGE4Q8IX94 777 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 ALDH1L1O75891 902 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 BRPF1P55201 1214 aaPredicted RBP9.24□□□□□ -0.93
SOX6-202ENST00000396356 MSL1Q68DK7 614 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 SRGAP1Q7Z6B7 1085 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 KDM5DQ9BY66 1539 aa9.24□□□□□ -0.93
SOX6-202ENST00000396356 UBA7P41226 1012 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 GBP6Q6ZN66 633 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 NCOA7Q8NI08 942 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 SH2D4AQ9H788 454 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 SUDS3Q9H7L9 328 aaPredicted RBP9.23□□□□□ -0.93
SOX6-202ENST00000396356 MTUS1Q9ULD2 1270 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 KIF24Q5T7B8 1368 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 ELL2O00472 640 aaPredicted RBP9.23□□□□□ -0.93
SOX6-202ENST00000396356 STX6O43752 255 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 ZNF189O75820 626 aaPredicted RBP9.23□□□□□ -0.93
SOX6-202ENST00000396356 CLCN1P35523 988 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 SYTL4Q96C24 671 aaPredicted RBP9.23□□□□□ -0.93
SOX6-202ENST00000396356 ELP1O95163 1332 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 GNA11P29992 359 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 PPP1R14CQ8TAE6 165 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 LZTS2Q9BRK4 669 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 EXOC1Q9NV70 894 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 GOLGA6CA6NDK9 693 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 GOLGA6BA6NDN3 693 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 GOLGA6DP0CG33 693 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 GOLGA6AQ9NYA3 693 aa9.23□□□□□ -0.93
SOX6-202ENST00000396356 EXOSC9Q06265 439 aaKnown RBP9.22□□□□□ -0.93
SOX6-202ENST00000396356 NUTM1Q86Y26 1132 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 LUC7L2Q9Y383 392 aaKnown RBP9.22□□□□□ -0.93
SOX6-202ENST00000396356 MSH5O43196 834 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 PLIN1O60240 522 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 HOXB7P09629 217 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 SSH2Q76I76 1423 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 GCC2Q8IWJ2 1684 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 MIS12Q9H081 205 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 RTL1A6NKG5 1358 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 ACTN4O43707 911 aaKnown RBP9.22□□□□□ -0.93
SOX6-202ENST00000396356 PHLDB2Q86SQ0 1253 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 MTMR3Q13615 1198 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 CCDC129Q6ZRS4 1044 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 FBXW7Q969H0 707 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 CACNA2D3Q8IZS8 1091 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 FBF1Q8TES7 1133 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 LLPHQ9BRT6 129 aaKnown RBP9.22□□□□□ -0.93
SOX6-202ENST00000396356 TMCO5BA8MYB1 307 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 KRT13P13646 458 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 KIF5AQ12840 1032 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 SPC24Q8NBT2 197 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 SLC17A8Q8NDX2 589 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 SAMD15Q9P1V8 674 aa9.22□□□□□ -0.93
SOX6-202ENST00000396356 ZNF165P49910 485 aa9.21□□□□□ -0.93
SOX6-202ENST00000396356 MAIP1Q8WWC4 291 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms