RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 DISP3Q9P2K9 1392 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 STX1AQ16623 288 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 PPP4R3BQ5MIZ7 849 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 ISM2Q6H9L7 571 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 NAA16Q6N069 864 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-203ENST00000394872 HEATR3Q7Z4Q2 680 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 SKAP1Q86WV1 359 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 ALS2CR12Q96Q35 445 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 PARP3Q9Y6F1 533 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 TTC22Q5TAA0 569 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 KIF18AQ8NI77 898 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 KLF18A0A0U1RQI7 1052 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 ESPNB1AK53 854 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 RHPN1Q8TCX5 695 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 VEZTQ9HBM0 779 aa11.93□□□□□ -0.5
COL4A6-203ENST00000394872 BCCIPQ9P287 314 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL4A6-203ENST00000394872 ZFYP08048 801 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-203ENST00000394872 AKAP4Q5JQC9 854 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 C16orf71Q8IYS4 520 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-203ENST00000394872 GCOM1H8Y6P7 765 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-203ENST00000394872 MYZAPP0CAP1 466 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 POLD1P28340 1107 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 ESR2Q92731 530 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 SIRT1Q96EB6 747 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 WWC3Q9ULE0 1092 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 IL16Q14005 1332 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 NOP2P46087 812 aaKnown RBP11.92□□□□□ -0.5
COL4A6-203ENST00000394872 PRPF4BQ13523 1007 aaKnown RBP11.92□□□□□ -0.5
COL4A6-203ENST00000394872 PLS1Q14651 629 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 TMC6Q7Z403 805 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 CNNM2Q9H8M5 875 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 TFCP2L1Q9NZI6 479 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 ZBTB43O43298 467 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 NBPF7P0C2Y1 421 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-203ENST00000394872 TRAF1Q13077 416 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 DZIP3Q86Y13 1208 aaKnown RBP11.92□□□□□ -0.5
COL4A6-203ENST00000394872 GDPD2Q9HCC8 539 aa11.92□□□□□ -0.5
COL4A6-203ENST00000394872 TAOK3Q9H2K8 898 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 RBM26Q5T8P6 1007 aaKnown RBP11.91□□□□□ -0.5
COL4A6-203ENST00000394872 INCENPQ9NQS7 918 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
COL4A6-203ENST00000394872 NF2P35240 595 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 PDCL2Q8N4E4 241 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 SHTN1A0MZ66 631 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 IL2RBP14784 551 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 RTN1Q16799 776 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 CCDC102BQ68D86 513 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 PSMD1Q99460 953 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 UHRF1BP1LA0JNW5 1464 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 MAGEB6P1A0A0J9YX57 407 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 ZSCAN30Q86W11 494 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 ERICH4A6NGS2 130 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 GRM8O00222 908 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 STAMBPO95630 424 aa11.91□□□□□ -0.5
COL4A6-203ENST00000394872 TEX14Q8IWB6 1497 aa11.9□□□□□ -0.5
COL4A6-203ENST00000394872 LMBR1LQ6UX01 489 aa11.9□□□□□ -0.5
COL4A6-203ENST00000394872 TMTC2Q8N394 836 aa11.9□□□□□ -0.5
COL4A6-203ENST00000394872 TRIM47Q96LD4 638 aa11.9□□□□□ -0.5
COL4A6-203ENST00000394872 FERMT1Q9BQL6 677 aa11.9□□□□□ -0.5
COL4A6-203ENST00000394872 RMND1Q9NWS8 449 aa11.9□□□□□ -0.5
COL4A6-203ENST00000394872 TRMT1Q9NXH9 659 aaKnown RBP11.9□□□□□ -0.5
COL4A6-203ENST00000394872 GOLGA6L10A0A0M3HER8 536 aa11.9□□□□□ -0.5
COL4A6-203ENST00000394872 SMARCC2Q8TAQ2 1214 aa11.9□□□□□ -0.5
COL4A6-203ENST00000394872 SYNCQ9H7C4 482 aa11.9□□□□□ -0.5
COL4A6-203ENST00000394872 STAT6P42226 847 aa11.9□□□□□ -0.5
COL4A6-203ENST00000394872 ALG1Q9BT22 464 aa11.9□□□□□ -0.5
COL4A6-203ENST00000394872 WDR7Q9Y4E6 1490 aa11.9□□□□□ -0.51
COL4A6-203ENST00000394872 UBE4AQ14139 1066 aa11.9□□□□□ -0.51
COL4A6-203ENST00000394872 TBC1D5Q92609 795 aa11.9□□□□□ -0.51
COL4A6-203ENST00000394872 LMAN1P49257 510 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 NAPAP54920 295 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 BMP2KLQ5H9B9 411 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 TNPO1Q92973 898 aaKnown RBP11.89□□□□□ -0.51
COL4A6-203ENST00000394872 LRRC2Q9BYS8 371 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 RIMBP2O15034 1052 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 IL15P40933 162 aaPredicted RBP11.89□□□□□ -0.51
COL4A6-203ENST00000394872 TPTE2Q6XPS3 522 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 BRF1Q92994 677 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 LRRC59Q96AG4 307 aaKnown RBP11.89□□□□□ -0.51
COL4A6-203ENST00000394872 RIMS2Q9UQ26 1411 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 PHACTR2O75167 634 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 MCMDC2Q4G0Z9 681 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 SLC9C2Q5TAH2 1124 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 NBPF14Q5TI25 921 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 NAA15Q9BXJ9 866 aaKnown RBP11.89□□□□□ -0.51
COL4A6-203ENST00000394872 ZC3H12CQ9C0D7 883 aaKnown RBP11.89□□□□□ -0.51
COL4A6-203ENST00000394872 PABPN1LA6NDY0 278 aaKnown RBP11.89□□□□□ -0.51
COL4A6-203ENST00000394872 CALM1P0DP23 149 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 CALM2P0DP24 149 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 CALM3P0DP25 149 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 RBM25P49756 843 aaKnown RBP11.89□□□□□ -0.51
COL4A6-203ENST00000394872 GNAQP50148 359 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 GSDMDP57764 484 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 HLTFQ14527 1009 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL4A6-203ENST00000394872 KSR2Q6VAB6 950 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 MEIS3Q99687 375 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 USP25Q9UHP3 1055 aa11.89□□□□□ -0.51
COL4A6-203ENST00000394872 ZSCAN16Q9H4T2 348 aaPredicted RBP11.89□□□□□ -0.51
COL4A6-203ENST00000394872 ECM2O94769 699 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms