RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 DDX19AQ9NUU7 478 aaKnown RBP16.51■□□□□ 0.23
CCDC57-203ENST00000392343 TRMT1Q9NXH9 659 aaKnown RBP16.51■□□□□ 0.23
CCDC57-203ENST00000392343 LRRC37A3O60309 1634 aa16.51■□□□□ 0.23
CCDC57-203ENST00000392343 H3BQV1 296 aa16.51■□□□□ 0.23
CCDC57-203ENST00000392343 IFFO2Q5TF58 517 aa16.51■□□□□ 0.23
CCDC57-203ENST00000392343 C11orf57Q6ZUT1 292 aaPredicted RBP16.51■□□□□ 0.23
CCDC57-203ENST00000392343 GTPBP4Q9BZE4 634 aaKnown RBP16.51■□□□□ 0.23
CCDC57-203ENST00000392343 ZNF530Q6P9A1 599 aaPredicted RBP16.5■□□□□ 0.23
CCDC57-203ENST00000392343 FILIP1Q7Z7B0 1213 aa16.5■□□□□ 0.23
CCDC57-203ENST00000392343 CCDC112Q8NEF3 446 aa16.5■□□□□ 0.23
CCDC57-203ENST00000392343 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
CCDC57-203ENST00000392343 SMTNL1A8MU46 457 aa16.5■□□□□ 0.23
CCDC57-203ENST00000392343 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
CCDC57-203ENST00000392343 TDRD7Q8NHU6 1098 aaKnown RBP16.5■□□□□ 0.23
CCDC57-203ENST00000392343 SEC62Q99442 399 aaKnown RBP16.5■□□□□ 0.23
CCDC57-203ENST00000392343 DBF4Q9UBU7 674 aaPredicted RBP16.5■□□□□ 0.23
CCDC57-203ENST00000392343 USP16Q9Y5T5 823 aa16.5■□□□□ 0.23
CCDC57-203ENST00000392343 NPHP1O15259 732 aa16.49■□□□□ 0.23
CCDC57-203ENST00000392343 MTX1Q13505 466 aa16.49■□□□□ 0.23
CCDC57-203ENST00000392343 ERC1Q8IUD2 1116 aa16.49■□□□□ 0.23
CCDC57-203ENST00000392343 NWD1Q149M9 1564 aa16.49■□□□□ 0.23
CCDC57-203ENST00000392343 NPHP4O75161 1426 aaPredicted RBP16.49■□□□□ 0.23
CCDC57-203ENST00000392343 GOLGA6L19H0YKK7 550 aa16.48■□□□□ 0.23
CCDC57-203ENST00000392343 Q6ZUG5 572 aa16.48■□□□□ 0.23
CCDC57-203ENST00000392343 SYTL4Q96C24 671 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-203ENST00000392343 PIK3C2AO00443 1686 aa16.48■□□□□ 0.23
CCDC57-203ENST00000392343 A0A0U1RQG5 324 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-203ENST00000392343 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
CCDC57-203ENST00000392343 CEP135Q66GS9 1140 aa16.48■□□□□ 0.23
CCDC57-203ENST00000392343 KSR2Q6VAB6 950 aa16.48■□□□□ 0.23
CCDC57-203ENST00000392343 NAP1L2Q9ULW6 460 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-203ENST00000392343 AGLP35573 1532 aa16.48■□□□□ 0.23
CCDC57-203ENST00000392343 FGD1P98174 961 aa16.48■□□□□ 0.23
CCDC57-203ENST00000392343 CTNNA3Q9UI47 895 aa16.48■□□□□ 0.23
CCDC57-203ENST00000392343 CEMIPQ8WUJ3 1361 aa16.47■□□□□ 0.23
CCDC57-203ENST00000392343 GRM8O00222 908 aa16.47■□□□□ 0.23
CCDC57-203ENST00000392343 GUCY1B3Q02153 619 aa16.47■□□□□ 0.23
CCDC57-203ENST00000392343 SLFNL1Q499Z3 407 aa16.47■□□□□ 0.23
CCDC57-203ENST00000392343 ZNF771Q7L3S4 317 aaPredicted RBP16.47■□□□□ 0.23
CCDC57-203ENST00000392343 RESTQ13127 1097 aa16.47■□□□□ 0.23
CCDC57-203ENST00000392343 LRRC8AQ8IWT6 810 aa16.47■□□□□ 0.23
CCDC57-203ENST00000392343 TAF5LO75529 589 aa16.46■□□□□ 0.23
CCDC57-203ENST00000392343 RBM43Q6ZSC3 357 aaKnown RBP16.46■□□□□ 0.23
CCDC57-203ENST00000392343 DNAJC2Q99543 621 aaKnown RBP16.46■□□□□ 0.23
CCDC57-203ENST00000392343 CRYBG1Q9Y4K1 1723 aa16.46■□□□□ 0.23
CCDC57-203ENST00000392343 HIP1O00291 1037 aa16.46■□□□□ 0.23
CCDC57-203ENST00000392343 NEK1Q96PY6 1258 aa16.46■□□□□ 0.23
CCDC57-203ENST00000392343 N4BP2Q86UW6 1770 aaPredicted RBP16.46■□□□□ 0.22
CCDC57-203ENST00000392343 DIP2BQ9P265 1576 aa16.45■□□□□ 0.22
CCDC57-203ENST00000392343 COL15A1P39059 1388 aa16.45■□□□□ 0.22
CCDC57-203ENST00000392343 SKILP12757 684 aa16.45■□□□□ 0.22
CCDC57-203ENST00000392343 MYL6BP14649 208 aa16.45■□□□□ 0.22
CCDC57-203ENST00000392343 IQCB1Q15051 598 aa16.45■□□□□ 0.22
CCDC57-203ENST00000392343 CCAR1Q8IX12 1150 aaKnown RBP16.45■□□□□ 0.22
CCDC57-203ENST00000392343 GTF3C6Q969F1 213 aa16.45■□□□□ 0.22
CCDC57-203ENST00000392343 GOLPH3LQ9H4A5 285 aa16.45■□□□□ 0.22
CCDC57-203ENST00000392343 OGFRQ9NZT2 677 aa16.45■□□□□ 0.22
CCDC57-203ENST00000392343 BECN2A8MW95 431 aa16.45■□□□□ 0.22
CCDC57-203ENST00000392343 GIGYF1O75420 1035 aaPredicted RBP16.45■□□□□ 0.22
CCDC57-203ENST00000392343 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
CCDC57-203ENST00000392343 CCT2P78371 535 aaKnown RBP16.45■□□□□ 0.22
CCDC57-203ENST00000392343 EPHA10Q5JZY3 1008 aa16.45■□□□□ 0.22
CCDC57-203ENST00000392343 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
CCDC57-203ENST00000392343 EID1Q9Y6B2 187 aa16.45■□□□□ 0.22
CCDC57-203ENST00000392343 ALDH1L1O75891 902 aa16.44■□□□□ 0.22
CCDC57-203ENST00000392343 SCRN1Q12765 414 aa16.44■□□□□ 0.22
CCDC57-203ENST00000392343 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.44■□□□□ 0.22
CCDC57-203ENST00000392343 PAXBP1Q9Y5B6 917 aa16.44■□□□□ 0.22
CCDC57-203ENST00000392343 FEZ1Q99689 392 aa16.44■□□□□ 0.22
CCDC57-203ENST00000392343 CYP21A2P08686 494 aa16.43■□□□□ 0.22
CCDC57-203ENST00000392343 HOXB7P09629 217 aa16.43■□□□□ 0.22
CCDC57-203ENST00000392343 PTPN14Q15678 1187 aa16.43■□□□□ 0.22
CCDC57-203ENST00000392343 RIC3Q7Z5B4 369 aa16.43■□□□□ 0.22
CCDC57-203ENST00000392343 NCOA5Q9HCD5 579 aaKnown RBP16.43■□□□□ 0.22
CCDC57-203ENST00000392343 MED23Q9ULK4 1368 aa16.43■□□□□ 0.22
CCDC57-203ENST00000392343 PLEKHG1Q9ULL1 1385 aa16.43■□□□□ 0.22
CCDC57-203ENST00000392343 CCDC69A6NI79 296 aa16.43■□□□□ 0.22
CCDC57-203ENST00000392343 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
CCDC57-203ENST00000392343 CHST3Q7LGC8 479 aa16.43■□□□□ 0.22
CCDC57-203ENST00000392343 A0A0G2JLW4 131 aa16.42■□□□□ 0.22
CCDC57-203ENST00000392343 KIF20AO95235 890 aa16.42■□□□□ 0.22
CCDC57-203ENST00000392343 IGKV5-2P06315 115 aa16.42■□□□□ 0.22
CCDC57-203ENST00000392343 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
CCDC57-203ENST00000392343 LINS1Q8NG48 757 aa16.42■□□□□ 0.22
CCDC57-203ENST00000392343 TAOK2Q9UL54 1235 aa16.42■□□□□ 0.22
CCDC57-203ENST00000392343 RNMTO43148 476 aaKnown RBP16.42■□□□□ 0.22
CCDC57-203ENST00000392343 APOBRQ0VD83 1088 aa16.42■□□□□ 0.22
CCDC57-203ENST00000392343 USP28Q96RU2 1077 aa16.42■□□□□ 0.22
CCDC57-203ENST00000392343 CFAP45Q9UL16 551 aa16.42■□□□□ 0.22
CCDC57-203ENST00000392343 KCNA6P17658 529 aa16.41■□□□□ 0.22
CCDC57-203ENST00000392343 KMT5BQ4FZB7 885 aa16.41■□□□□ 0.22
CCDC57-203ENST00000392343 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
CCDC57-203ENST00000392343 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
CCDC57-203ENST00000392343 AOPEPQ8N6M6 819 aa16.41■□□□□ 0.22
CCDC57-203ENST00000392343 IP6K1Q92551 441 aa16.41■□□□□ 0.22
CCDC57-203ENST00000392343 CGNQ9P2M7 1197 aaKnown RBP16.41■□□□□ 0.22
CCDC57-203ENST00000392343 DBNLQ9UJU6 430 aaKnown RBP16.41■□□□□ 0.22
CCDC57-203ENST00000392343 DDX41Q9UJV9 622 aaKnown RBP16.41■□□□□ 0.22
CCDC57-203ENST00000392343 UBR1Q8IWV7 1749 aa16.41■□□□□ 0.22
CCDC57-203ENST00000392343 ADD1P35611 737 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms