RNA–Protein interactions for RNA: ENST00000381989.3

PARP4-201, Transcript of poly(ADP-ribose) polymerase family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP4, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP4-201ENST00000381989 CATIPQ7Z7H3 387 aa9.74□□□□□ -0.85
PARP4-201ENST00000381989 KRT23Q9C075 422 aa9.74□□□□□ -0.85
PARP4-201ENST00000381989 PABPN1LA6NDY0 278 aaKnown RBP9.74□□□□□ -0.85
PARP4-201ENST00000381989 FYB1O15117 783 aa9.74□□□□□ -0.85
PARP4-201ENST00000381989 ZSCAN12O43309 604 aa9.74□□□□□ -0.85
PARP4-201ENST00000381989 SLC26A8Q96RN1 970 aa9.74□□□□□ -0.85
PARP4-201ENST00000381989 CRNKL1Q9BZJ0 848 aaKnown RBP9.74□□□□□ -0.85
PARP4-201ENST00000381989 RIMS1Q86UR5 1692 aaKnown RBP9.74□□□□□ -0.85
PARP4-201ENST00000381989 MKNK2Q9HBH9 465 aa9.73□□□□□ -0.85
PARP4-201ENST00000381989 PDRG1Q9NUG6 133 aa9.73□□□□□ -0.85
PARP4-201ENST00000381989 PDZRN3Q9UPQ7 1066 aa9.73□□□□□ -0.85
PARP4-201ENST00000381989 CCDC94Q9BW85 323 aaPredicted RBP9.73□□□□□ -0.85
PARP4-201ENST00000381989 VIMP08670 466 aaKnown RBP9.73□□□□□ -0.85
PARP4-201ENST00000381989 SNRPA1P09661 255 aaKnown RBP9.73□□□□□ -0.85
PARP4-201ENST00000381989 AACSQ86V21 672 aa9.73□□□□□ -0.85
PARP4-201ENST00000381989 EVI5LQ96CN4 794 aa9.73□□□□□ -0.85
PARP4-201ENST00000381989 NOB1Q9ULX3 412 aaKnown RBP9.73□□□□□ -0.85
PARP4-201ENST00000381989 ZNF804AQ7Z570 1209 aa9.72□□□□□ -0.85
PARP4-201ENST00000381989 CALML4Q96GE6 196 aa9.72□□□□□ -0.85
PARP4-201ENST00000381989 CWC25Q9NXE8 425 aaPredicted RBP9.72□□□□□ -0.85
PARP4-201ENST00000381989 ARHGEF10O15013 1369 aa9.72□□□□□ -0.85
PARP4-201ENST00000381989 SNX16P57768 344 aa9.72□□□□□ -0.85
PARP4-201ENST00000381989 DDX54Q8TDD1 881 aaKnown RBP9.72□□□□□ -0.85
PARP4-201ENST00000381989 KRT28Q7Z3Y7 464 aa9.72□□□□□ -0.85
PARP4-201ENST00000381989 C16orf71Q8IYS4 520 aaPredicted RBP9.72□□□□□ -0.85
PARP4-201ENST00000381989 DRC1Q96MC2 740 aa9.72□□□□□ -0.85
PARP4-201ENST00000381989 FAM107BQ9H098 131 aa9.72□□□□□ -0.85
PARP4-201ENST00000381989 NAPBQ9H115 298 aa9.72□□□□□ -0.85
PARP4-201ENST00000381989 A2ML1A8K2U0 1454 aa9.72□□□□□ -0.85
PARP4-201ENST00000381989 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.85
PARP4-201ENST00000381989 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.85
PARP4-201ENST00000381989 GCOM1H8Y6P7 765 aaPredicted RBP9.71□□□□□ -0.85
PARP4-201ENST00000381989 K7ELQ4 463 aaPredicted RBP9.71□□□□□ -0.85
PARP4-201ENST00000381989 MYZAPP0CAP1 466 aa9.71□□□□□ -0.85
PARP4-201ENST00000381989 NUTM2AQ8IVF1 878 aaPredicted RBP9.71□□□□□ -0.85
PARP4-201ENST00000381989 LRRC59Q96AG4 307 aaKnown RBP9.71□□□□□ -0.85
PARP4-201ENST00000381989 NAA15Q9BXJ9 866 aaKnown RBP9.71□□□□□ -0.85
PARP4-201ENST00000381989 RTL1A6NKG5 1358 aa9.71□□□□□ -0.85
PARP4-201ENST00000381989 CPSF1Q10570 1443 aaKnown RBP9.71□□□□□ -0.85
PARP4-201ENST00000381989 USO1O60763 962 aaKnown RBP9.71□□□□□ -0.85
PARP4-201ENST00000381989 CCDC82Q8N4S0 544 aa9.71□□□□□ -0.85
PARP4-201ENST00000381989 AMOTL2Q9Y2J4 779 aa9.71□□□□□ -0.85
PARP4-201ENST00000381989 RTL9Q8NET4 1388 aa9.71□□□□□ -0.85
PARP4-201ENST00000381989 PLEKHG1Q9ULL1 1385 aa9.71□□□□□ -0.86
PARP4-201ENST00000381989 NBPF7P0C2Y1 421 aaPredicted RBP9.71□□□□□ -0.86
PARP4-201ENST00000381989 CHD1LQ86WJ1 897 aa9.71□□□□□ -0.86
PARP4-201ENST00000381989 TNMDQ9H2S6 317 aa9.71□□□□□ -0.86
PARP4-201ENST00000381989 ANO10Q9NW15 660 aa9.71□□□□□ -0.86
PARP4-201ENST00000381989 RGS12O14924 1447 aa9.71□□□□□ -0.86
PARP4-201ENST00000381989 CDK12Q9NYV4 1490 aaPredicted RBP9.7□□□□□ -0.86
PARP4-201ENST00000381989 SERPINC1P01008 464 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 DDIT3P35638 169 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 SPA17Q15506 151 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 BRDTQ58F21 947 aaPredicted RBP9.7□□□□□ -0.86
PARP4-201ENST00000381989 PPM1EQ8WY54 764 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 RGPD8O14715 1765 aaPredicted RBP9.7□□□□□ -0.86
PARP4-201ENST00000381989 SRGAP3O43295 1099 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 SPAG1Q07617 926 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 TMED8Q6PL24 325 aaPredicted RBP9.7□□□□□ -0.86
PARP4-201ENST00000381989 DNAAF4Q8WXU2 420 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 LNPKQ9C0E8 428 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 HOXB7P09629 217 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 MATR3P43243 847 aaKnown RBP eCLIP9.7□□□□□ -0.862e-6■■■■■ 27.1
PARP4-201ENST00000381989 TRIM5Q9C035 493 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 TMOD4Q9NZQ9 345 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 CNGA1P29973 690 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 SSRP1Q08945 709 aaKnown RBP9.7□□□□□ -0.86
PARP4-201ENST00000381989 PARP10Q53GL7 1025 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 TCP11L1Q9NUJ3 509 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 UBR1Q8IWV7 1749 aa9.7□□□□□ -0.86
PARP4-201ENST00000381989 RFC4P35249 363 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 LEKR1Q6ZMV7 388 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 PDILTQ8N807 584 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 GABPB2Q8TAK5 448 aaPredicted RBP9.69□□□□□ -0.86
PARP4-201ENST00000381989 ANKIB1Q9P2G1 1089 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 NEK4P51957 841 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 GRIPAP1Q4V328 841 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 ANKRD24Q8TF21 1146 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 UTP14AQ9BVJ6 771 aaKnown RBP9.69□□□□□ -0.86
PARP4-201ENST00000381989 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
PARP4-201ENST00000381989 CCDC194A0A1B0GVG4 234 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 NFKBIBQ15653 356 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 LARP1BQ659C4 914 aaKnown RBP9.69□□□□□ -0.86
PARP4-201ENST00000381989 NCOA3Q9Y6Q9 1424 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 TSPOAP1O95153 1857 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 ATL3Q6DD88 541 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 KIAA1524Q8TCG1 905 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 TANGO6Q9C0B7 1094 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 RAD50Q92878 1312 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 BRPF1P55201 1214 aaPredicted RBP9.69□□□□□ -0.86
PARP4-201ENST00000381989 GSDMDP57764 484 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 ATP2B2Q01814 1243 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 FILIP1Q7Z7B0 1213 aa9.69□□□□□ -0.86
PARP4-201ENST00000381989 NEFHP12036 1026 aa9.68□□□□□ -0.86
PARP4-201ENST00000381989 FBXO31Q5XUX0 539 aaPredicted RBP9.68□□□□□ -0.86
PARP4-201ENST00000381989 OGFOD1Q8N543 542 aa9.68□□□□□ -0.86
PARP4-201ENST00000381989 SCLT1Q96NL6 688 aa9.68□□□□□ -0.86
PARP4-201ENST00000381989 HOMER2Q9NSB8 354 aa9.68□□□□□ -0.86
PARP4-201ENST00000381989 DIP2AQ14689 1571 aa9.68□□□□□ -0.86
PARP4-201ENST00000381989 LMOD1P29536 600 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms