RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 C3orf20Q8ND61 904 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 TSC1Q92574 1164 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 PCMTD1Q96MG8 357 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-203ENST00000381196 LMTK2Q8IWU2 1503 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 CHD2O14647 1828 aaKnown RBP5.61□□□□□ -1.51
PTPRD-203ENST00000381196 VAV2P52735 878 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 PRAM1Q96QH2 718 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 BAG4O95429 457 aaKnown RBP5.61□□□□□ -1.51
PTPRD-203ENST00000381196 ATP5DP30049 168 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 ISM2Q6H9L7 571 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 SEPT14Q6ZU15 432 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 PPFIBP1Q86W92 1011 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 ZSCAN29Q8IWY8 852 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-203ENST00000381196 ZNF518AQ6AHZ1 1483 aa5.61□□□□□ -1.51
PTPRD-203ENST00000381196 CASTP20810 708 aaKnown RBP5.6□□□□□ -1.51
PTPRD-203ENST00000381196 SPRYD3Q8NCJ5 442 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 EXOC4Q96A65 974 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 SEC62Q99442 399 aaKnown RBP5.6□□□□□ -1.51
PTPRD-203ENST00000381196 DNAI1Q9UI46 699 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 ZC3H15Q8WU90 426 aaKnown RBP5.6□□□□□ -1.51
PTPRD-203ENST00000381196 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTPRD-203ENST00000381196 GOLGA1Q92805 767 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 LARSQ9P2J5 1176 aaKnown RBP5.6□□□□□ -1.51
PTPRD-203ENST00000381196 CARMIL3Q8ND23 1372 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 IRX4P78413 519 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 BEGAINQ9BUH8 593 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 ZHX1Q9UKY1 873 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-203ENST00000381196 ATXN2Q99700 1313 aaKnown RBP5.6□□□□□ -1.51
PTPRD-203ENST00000381196 HMOX1P09601 288 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 SLFN5Q08AF3 891 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 GRM1Q13255 1194 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 C6orf163Q5TEZ5 329 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 GGNBP2Q9H3C7 697 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 TMOD3Q9NYL9 352 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 KDM2BQ8NHM5 1336 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 PPP2R1AP30153 589 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 PPFIA1Q13136 1202 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 CCDC51Q96ER9 411 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 ANO2Q9NQ90 1003 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 SBNO1A3KN83 1393 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 STARD3NLO95772 234 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 UBTFL1P0CB47 393 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-203ENST00000381196 BSDC1Q9NW68 430 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-203ENST00000381196 BABAM1Q9NWV8 329 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 CLIP2Q9UDT6 1046 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 ABCA6Q8N139 1617 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 KCNH5Q8NCM2 988 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 BICD2Q8TD16 824 aa5.6□□□□□ -1.51
PTPRD-203ENST00000381196 EVI5O60447 810 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 PPFIA4O75335 1185 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 SKILP12757 684 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 PLCB4Q15147 1175 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 HSP90AB2PQ58FF8 381 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 ATF7IPQ6VMQ6 1270 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 VPS36Q86VN1 386 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 ANKRD24Q8TF21 1146 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 MAML3Q96JK9 1138 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 ZNF692Q9BU19 519 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 XRCC6P12956 609 aaKnown RBP eCLIP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 MTHFSP49914 203 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 ZC3H6P61129 1189 aaKnown RBP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 CTNNA3Q9UI47 895 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 CLEC11AQ9Y240 323 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 CYP46A1Q9Y6A2 500 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 MYCNP04198 464 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 MRPS25P82663 173 aaKnown RBP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 CCDC65Q8IXS2 484 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 JAKMIP1Q96N16 626 aaKnown RBP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 RABEP2Q9H5N1 569 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 PLCH2O75038 1416 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 MX1P20591 662 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 IGHMBP2P38935 993 aaKnown RBP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 RPGRQ92834 1020 aaKnown RBP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 CCDC114Q96M63 670 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 LRRC27Q9C0I9 530 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 IRX1P78414 480 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 TSNAXIP1Q2TAA8 658 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 CCDC155Q8N6L0 562 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 GIGYF1O75420 1035 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 DDX46Q7L014 1031 aaKnown RBP5.59□□□□□ -1.51
PTPRD-203ENST00000381196 CADPS2Q86UW7 1296 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 VCXQ9H320 206 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 PLB1Q6P1J6 1458 aa5.59□□□□□ -1.51
PTPRD-203ENST00000381196 NOLC1Q14978 699 aaKnown RBP eCLIP5.59□□□□□ -1.52
PTPRD-203ENST00000381196 CHD1LQ86WJ1 897 aa5.59□□□□□ -1.52
PTPRD-203ENST00000381196 GOLGA4Q13439 2230 aaKnown RBP5.59□□□□□ -1.52
PTPRD-203ENST00000381196 SEPT6Q14141 434 aa5.59□□□□□ -1.52
PTPRD-203ENST00000381196 GPR161Q8N6U8 529 aaKnown RBP5.59□□□□□ -1.52
PTPRD-203ENST00000381196 NACAP1Q9BZK3 213 aa5.59□□□□□ -1.52
PTPRD-203ENST00000381196 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.59□□□□□ -1.52
PTPRD-203ENST00000381196 UGGT1Q9NYU2 1555 aa5.59□□□□□ -1.52
PTPRD-203ENST00000381196 USO1O60763 962 aaKnown RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 FLOT1O75955 427 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 NBPF20Q3BBV1 942 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 CEP135Q66GS9 1140 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 HDAC9Q9UKV0 1011 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 MROH1Q8NDA8 1641 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 TRIM37O94972 964 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 TCP11Q8WWU5 503 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms