RNA–Protein interactions for RNA: ENST00000380693.7

MSL3-206, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-206ENST00000380693 CNPY2Q9Y2B0 182 aa9.11□□□□□ -0.95
MSL3-206ENST00000380693 ZNF500O60304 480 aaPredicted RBP9.1□□□□□ -0.95
MSL3-206ENST00000380693 PDCP20941 246 aa9.1□□□□□ -0.95
MSL3-206ENST00000380693 RPS6KB1P23443 525 aa9.1□□□□□ -0.95
MSL3-206ENST00000380693 MSNP26038 577 aaKnown RBP9.1□□□□□ -0.95
MSL3-206ENST00000380693 DDX17Q92841 729 aaKnown RBP9.1□□□□□ -0.95
MSL3-206ENST00000380693 LARP6Q9BRS8 491 aaKnown RBP9.1□□□□□ -0.95
MSL3-206ENST00000380693 A0A087WZG4 1122 aa9.1□□□□□ -0.95
MSL3-206ENST00000380693 H7C1W4 665 aa9.1□□□□□ -0.95
MSL3-206ENST00000380693 CHRNA2Q15822 529 aa9.1□□□□□ -0.95
MSL3-206ENST00000380693 CABLES1Q8TDN4 633 aa9.1□□□□□ -0.95
MSL3-206ENST00000380693 HAUS7Q99871 368 aa9.1□□□□□ -0.95
MSL3-206ENST00000380693 GPR108Q9NPR9 543 aa9.1□□□□□ -0.95
MSL3-206ENST00000380693 AFDNP55196 1824 aaKnown RBP9.1□□□□□ -0.95
MSL3-206ENST00000380693 ERVV-2B6SEH9 535 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 TFCP2Q12800 502 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 NKX1-1Q15270 411 aaPredicted RBP9.09□□□□□ -0.95
MSL3-206ENST00000380693 ZNF589Q86UQ0 364 aaPredicted RBP9.09□□□□□ -0.95
MSL3-206ENST00000380693 TCHHQ07283 1943 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 PCDH11XQ9BZA7 1347 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 PCDH11YQ9BZA8 1340 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 UBR2Q8IWV8 1755 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 OFD1O75665 1012 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 FOXO4P98177 505 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 TOB2Q14106 344 aaPredicted RBP9.09□□□□□ -0.95
MSL3-206ENST00000380693 FOXD4L6Q3SYB3 417 aaPredicted RBP9.09□□□□□ -0.95
MSL3-206ENST00000380693 FOXD4L3Q6VB84 417 aaPredicted RBP9.09□□□□□ -0.95
MSL3-206ENST00000380693 NAP1L5Q96NT1 182 aaPredicted RBP9.09□□□□□ -0.95
MSL3-206ENST00000380693 CCDC39Q9UFE4 941 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 ZKSCAN5Q9Y2L8 839 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 ELP1O95163 1332 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 WDR17Q8IZU2 1322 aa9.09□□□□□ -0.95
MSL3-206ENST00000380693 NBPF26B4DH59 902 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 TERF1P54274 439 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 NBPF14Q5TI25 921 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 NBPF10Q6P3W6 841 aaKnown RBP9.08□□□□□ -0.96
MSL3-206ENST00000380693 NBPF15Q8N660 670 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.08□□□□□ -0.96
MSL3-206ENST00000380693 U3KPZ7 1027 aaPredicted RBP9.08□□□□□ -0.96
MSL3-206ENST00000380693 SH3TC1Q8TE82 1336 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 PALLDQ8WX93 1383 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 ZNF609O15014 1411 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 ATP5J2-PTCD1G3V325 749 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 PTCD1O75127 700 aaKnown RBP9.08□□□□□ -0.96
MSL3-206ENST00000380693 DNM1Q05193 864 aaKnown RBP9.08□□□□□ -0.96
MSL3-206ENST00000380693 LARP1BQ659C4 914 aaKnown RBP9.08□□□□□ -0.96
MSL3-206ENST00000380693 NECAB1Q8N987 351 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 KBTBD3Q8NAB2 608 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 RNF214Q8ND24 703 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 DBNDD2Q9BQY9 259 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 ATG3Q9NT62 314 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 PAPPAQ13219 1627 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 KCPQ6ZWJ8 1503 aa9.08□□□□□ -0.96
MSL3-206ENST00000380693 NUP188Q5SRE5 1749 aa9.07□□□□□ -0.96
MSL3-206ENST00000380693 TNS2Q63HR2 1409 aa9.07□□□□□ -0.96
MSL3-206ENST00000380693 FIBPO43427 364 aa9.07□□□□□ -0.96
MSL3-206ENST00000380693 PIP4K2AP48426 406 aaPredicted RBP9.07□□□□□ -0.96
MSL3-206ENST00000380693 COL9A3Q14050 684 aaPredicted RBP9.07□□□□□ -0.96
MSL3-206ENST00000380693 MCMDC2Q4G0Z9 681 aa9.07□□□□□ -0.96
MSL3-206ENST00000380693 LMBR1LQ6UX01 489 aa9.07□□□□□ -0.96
MSL3-206ENST00000380693 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.07□□□□□ -0.96
MSL3-206ENST00000380693 CCDC191Q8NCU4 936 aa9.07□□□□□ -0.96
MSL3-206ENST00000380693 ZCRB1Q8TBF4 217 aaKnown RBP9.07□□□□□ -0.96
MSL3-206ENST00000380693 EDC3Q96F86 508 aaKnown RBP9.07□□□□□ -0.96
MSL3-206ENST00000380693 FUCA2Q9BTY2 467 aa9.07□□□□□ -0.96
MSL3-206ENST00000380693 CWC25Q9NXE8 425 aaPredicted RBP9.07□□□□□ -0.96
MSL3-206ENST00000380693 TAF6LQ9Y6J9 622 aa9.07□□□□□ -0.96
MSL3-206ENST00000380693 IL15P40933 162 aaPredicted RBP9.07□□□□□ -0.96
MSL3-206ENST00000380693 KRT85P78386 507 aa9.07□□□□□ -0.96
MSL3-206ENST00000380693 ATG9AQ7Z3C6 839 aa9.07□□□□□ -0.96
MSL3-206ENST00000380693 VPS37CA5D8V6 355 aaPredicted RBP9.06□□□□□ -0.96
MSL3-206ENST00000380693 CIAO1O76071 339 aa9.06□□□□□ -0.96
MSL3-206ENST00000380693 BRINP3Q76B58 766 aa9.06□□□□□ -0.96
MSL3-206ENST00000380693 DDX54Q8TDD1 881 aaKnown RBP9.06□□□□□ -0.96
MSL3-206ENST00000380693 JARID2Q92833 1246 aaPredicted RBP9.06□□□□□ -0.96
MSL3-206ENST00000380693 NEK1Q96PY6 1258 aa9.06□□□□□ -0.96
MSL3-206ENST00000380693 TJP1Q07157 1748 aa9.06□□□□□ -0.96
MSL3-206ENST00000380693 COL5A2P05997 1499 aaPredicted RBP9.06□□□□□ -0.96
MSL3-206ENST00000380693 TPM2P07951 284 aa9.06□□□□□ -0.96
MSL3-206ENST00000380693 HMGB1P09429 215 aaKnown RBP9.06□□□□□ -0.96
MSL3-206ENST00000380693 GTF3C6Q969F1 213 aa9.06□□□□□ -0.96
MSL3-206ENST00000380693 SCAND2PQ9GZW5 306 aaPredicted RBP9.06□□□□□ -0.96
MSL3-206ENST00000380693 HELLSQ9NRZ9 838 aa9.06□□□□□ -0.96
MSL3-206ENST00000380693 SOS2Q07890 1332 aaPredicted RBP9.06□□□□□ -0.96
MSL3-206ENST00000380693 CYP21A2P08686 494 aa9.05□□□□□ -0.96
MSL3-206ENST00000380693 CDC37L1Q7L3B6 337 aa9.05□□□□□ -0.96
MSL3-206ENST00000380693 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.05□□□□□ -0.96
MSL3-206ENST00000380693 DSCC1Q9BVC3 393 aa9.05□□□□□ -0.96
MSL3-206ENST00000380693 CARD10Q9BWT7 1032 aa9.05□□□□□ -0.96
MSL3-206ENST00000380693 PRDM11Q9NQV5 511 aa9.05□□□□□ -0.96
MSL3-206ENST00000380693 FBXO3Q9UK99 471 aa9.05□□□□□ -0.96
MSL3-206ENST00000380693 SPEF2Q9C093 1822 aa9.05□□□□□ -0.96
MSL3-206ENST00000380693 EYA2O00167 538 aa9.05□□□□□ -0.96
MSL3-206ENST00000380693 TULP1O00294 542 aaPredicted RBP9.05□□□□□ -0.96
MSL3-206ENST00000380693 TRIM28Q13263 835 aaKnown RBP9.05□□□□□ -0.96
MSL3-206ENST00000380693 TTLL7Q6ZT98 887 aa9.05□□□□□ -0.96
MSL3-206ENST00000380693 TTC6Q86TZ1 520 aa9.05□□□□□ -0.96
MSL3-206ENST00000380693 DNAJC2Q99543 621 aaKnown RBP9.05□□□□□ -0.96
MSL3-206ENST00000380693 LLPHQ9BRT6 129 aaKnown RBP9.05□□□□□ -0.96
MSL3-206ENST00000380693 AGXT2Q9BYV1 514 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms