RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 LIG1P18858 919 aa12.8□□□□□ -0.36
RAD50-201ENST00000378823 MXRA7P84157 204 aa12.8□□□□□ -0.36
RAD50-201ENST00000378823 SLC26A6Q9BXS9 759 aa12.8□□□□□ -0.36
RAD50-201ENST00000378823 ECHDC1Q9NTX5 307 aa12.8□□□□□ -0.36
RAD50-201ENST00000378823 TRMT112Q9UI30 125 aaKnown RBP12.8□□□□□ -0.36
RAD50-201ENST00000378823 F6X3S4 739 aa12.79□□□□□ -0.36
RAD50-201ENST00000378823 GTF2A1P52655 376 aaPredicted RBP12.79□□□□□ -0.36
RAD50-201ENST00000378823 PUS7Q96PZ0 661 aaKnown RBP12.79□□□□□ -0.36
RAD50-201ENST00000378823 ORC3Q9UBD5 711 aaPredicted RBP12.79□□□□□ -0.36
RAD50-201ENST00000378823 ANO6Q4KMQ2 910 aa12.79□□□□□ -0.36
RAD50-201ENST00000378823 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
RAD50-201ENST00000378823 GIMAP6Q6P9H5 292 aa12.79□□□□□ -0.36
RAD50-201ENST00000378823 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
RAD50-201ENST00000378823 RBM25P49756 843 aaKnown RBP12.79□□□□□ -0.36
RAD50-201ENST00000378823 POGZQ7Z3K3 1410 aa12.79□□□□□ -0.36
RAD50-201ENST00000378823 IQGAP2Q13576 1575 aa12.79□□□□□ -0.36
RAD50-201ENST00000378823 OPA1O60313 960 aa12.79□□□□□ -0.36
RAD50-201ENST00000378823 BMP15O95972 392 aa12.79□□□□□ -0.36
RAD50-201ENST00000378823 BICD1Q96G01 975 aa12.79□□□□□ -0.36
RAD50-201ENST00000378823 PANK2Q9BZ23 570 aa12.79□□□□□ -0.36
RAD50-201ENST00000378823 TBCAO75347 108 aaKnown RBP12.79□□□□□ -0.36
RAD50-201ENST00000378823 TBC1D32Q96NH3 1257 aa12.78□□□□□ -0.36
RAD50-201ENST00000378823 MPRIPQ6WCQ1 1025 aa12.78□□□□□ -0.36
RAD50-201ENST00000378823 RAB3IL1Q8TBN0 382 aa12.78□□□□□ -0.36
RAD50-201ENST00000378823 ERMNQ8TAM6 284 aa12.78□□□□□ -0.36
RAD50-201ENST00000378823 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.78□□□□□ -0.36
RAD50-201ENST00000378823 V9GYY5 206 aaPredicted RBP12.78□□□□□ -0.36
RAD50-201ENST00000378823 ZSCAN22P10073 491 aaPredicted RBP12.78□□□□□ -0.36
RAD50-201ENST00000378823 MPHOSPH6Q99547 160 aaKnown RBP12.78□□□□□ -0.36
RAD50-201ENST00000378823 VAT1LQ9HCJ6 419 aa12.78□□□□□ -0.36
RAD50-201ENST00000378823 MAP3K2Q9Y2U5 619 aa12.78□□□□□ -0.36
RAD50-201ENST00000378823 FLIIQ13045 1269 aa12.78□□□□□ -0.36
RAD50-201ENST00000378823 CDC5LQ99459 802 aaKnown RBP12.78□□□□□ -0.36
RAD50-201ENST00000378823 SRRTQ9BXP5 876 aaKnown RBP12.78□□□□□ -0.36
RAD50-201ENST00000378823 SKILP12757 684 aa12.78□□□□□ -0.36
RAD50-201ENST00000378823 CCDC160A6NGH7 325 aa12.77□□□□□ -0.36
RAD50-201ENST00000378823 ZBTB16Q05516 673 aa12.77□□□□□ -0.36
RAD50-201ENST00000378823 TTC14Q96N46 770 aa12.77□□□□□ -0.36
RAD50-201ENST00000378823 SPAG5Q96R06 1193 aa12.77□□□□□ -0.36
RAD50-201ENST00000378823 CTAGE15A4D2H0 777 aa12.77□□□□□ -0.36
RAD50-201ENST00000378823 ATP2A1O14983 1001 aa12.77□□□□□ -0.36
RAD50-201ENST00000378823 CTAGE8P0CG41 777 aa12.77□□□□□ -0.36
RAD50-201ENST00000378823 CTAGE6Q86UF2 777 aa12.77□□□□□ -0.36
RAD50-201ENST00000378823 CTAGE4Q8IX94 777 aa12.77□□□□□ -0.36
RAD50-201ENST00000378823 CWC25Q9NXE8 425 aaPredicted RBP12.77□□□□□ -0.36
RAD50-201ENST00000378823 HLA-DOAP06340 250 aa12.77□□□□□ -0.37
RAD50-201ENST00000378823 TMTC2Q8N394 836 aa12.77□□□□□ -0.37
RAD50-201ENST00000378823 GOLGA1Q92805 767 aa12.77□□□□□ -0.37
RAD50-201ENST00000378823 MMRN2Q9H8L6 949 aa12.77□□□□□ -0.37
RAD50-201ENST00000378823 IFIT1BQ5T764 474 aaKnown RBP12.76□□□□□ -0.37
RAD50-201ENST00000378823 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
RAD50-201ENST00000378823 DDX46Q7L014 1031 aaKnown RBP12.76□□□□□ -0.37
RAD50-201ENST00000378823 TRMT1LQ7Z2T5 733 aaKnown RBP12.76□□□□□ -0.37
RAD50-201ENST00000378823 ARL1P40616 181 aaPredicted RBP12.76□□□□□ -0.37
RAD50-201ENST00000378823 TTLL12Q14166 644 aaPredicted RBP12.76□□□□□ -0.37
RAD50-201ENST00000378823 ATRIPQ8WXE1 791 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 CCDC77Q9BR77 488 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 ZWINTO95229 277 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 HAND2P61296 217 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 KIF5AQ12840 1032 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 TTC22Q5TAA0 569 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 KRT86O43790 486 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 MRPS9P82933 396 aaKnown RBP12.76□□□□□ -0.37
RAD50-201ENST00000378823 WTAPQ15007 396 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 SMC6Q96SB8 1091 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 UTP14AQ9BVJ6 771 aaKnown RBP12.76□□□□□ -0.37
RAD50-201ENST00000378823 KRT23Q9C075 422 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 DNAI1Q9UI46 699 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 STX8Q9UNK0 236 aa12.76□□□□□ -0.37
RAD50-201ENST00000378823 PSMA7O14818 248 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 NOLC1Q14978 699 aaKnown RBP eCLIP12.75□□□□□ -0.37
RAD50-201ENST00000378823 CTTNBP2Q8WZ74 1663 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 ATP2C2O75185 946 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 TUBB4AP04350 444 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 KRT13P13646 458 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 SYT1P21579 422 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 AFMP43652 599 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 GSTA5Q7RTV2 222 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 LDHAL6AQ6ZMR3 332 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
RAD50-201ENST00000378823 RSPH14Q9UHP6 348 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 PIK3R4Q99570 1358 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 PTGS1P23219 599 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 TACC1O75410 805 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 CAPN2P17655 700 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 ZBTB43O43298 467 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 MAP7D1Q3KQU3 841 aa12.75□□□□□ -0.37
RAD50-201ENST00000378823 KRT83P78385 493 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 SPAG1Q07617 926 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 OTUD6BQ8N6M0 293 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 LMBR1Q8WVP7 490 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 CNNM2Q9H8M5 875 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 EBAG9O00559 213 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 FAM200AQ8TCP9 573 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 CDK13Q14004 1512 aaKnown RBP12.74□□□□□ -0.37
RAD50-201ENST00000378823 CRNKL1Q9BZJ0 848 aaKnown RBP12.74□□□□□ -0.37
RAD50-201ENST00000378823 JAKMIP2Q96AA8 810 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 LDHCP07864 332 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms