RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 TRERF1Q96PN7 1200 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 NEK1Q96PY6 1258 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 SH2B1Q9NRF2 756 aaPredicted RBP13.63□□□□□ -0.23
SEC23B-204ENST00000377475 GJB4Q9NTQ9 266 aa13.63□□□□□ -0.23
SEC23B-204ENST00000377475 CCDC112Q8NEF3 446 aa13.62□□□□□ -0.23
SEC23B-204ENST00000377475 ZNF594Q96JF6 807 aaPredicted RBP13.62□□□□□ -0.23
SEC23B-204ENST00000377475 USP6P35125 1406 aa13.62□□□□□ -0.23
SEC23B-204ENST00000377475 ERICH4A6NGS2 130 aa13.62□□□□□ -0.23
SEC23B-204ENST00000377475 ATP2B3Q16720 1220 aa13.62□□□□□ -0.23
SEC23B-204ENST00000377475 EPHA10Q5JZY3 1008 aa13.62□□□□□ -0.23
SEC23B-204ENST00000377475 HOMER1Q86YM7 354 aa13.62□□□□□ -0.23
SEC23B-204ENST00000377475 ANKRD24Q8TF21 1146 aa13.62□□□□□ -0.23
SEC23B-204ENST00000377475 KCNF1Q9H3M0 494 aa13.62□□□□□ -0.23
SEC23B-204ENST00000377475 A0A0G2JLW4 131 aa13.62□□□□□ -0.23
SEC23B-204ENST00000377475 ERC1Q8IUD2 1116 aa13.62□□□□□ -0.23
SEC23B-204ENST00000377475 CCAR1Q8IX12 1150 aaKnown RBP13.62□□□□□ -0.23
SEC23B-204ENST00000377475 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
SEC23B-204ENST00000377475 SALL3Q9BXA9 1300 aa13.62□□□□□ -0.23
SEC23B-204ENST00000377475 LEO1Q8WVC0 666 aaPredicted RBP13.61□□□□□ -0.23
SEC23B-204ENST00000377475 A0A1B0GVL5 298 aa13.61□□□□□ -0.23
SEC23B-204ENST00000377475 CPLX1O14810 134 aa13.61□□□□□ -0.23
SEC23B-204ENST00000377475 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
SEC23B-204ENST00000377475 TTLL5Q6EMB2 1281 aa13.61□□□□□ -0.23
SEC23B-204ENST00000377475 MRVI1Q9Y6F6 885 aa13.61□□□□□ -0.23
SEC23B-204ENST00000377475 LMBR1LQ6UX01 489 aa13.6□□□□□ -0.23
SEC23B-204ENST00000377475 FSIP1Q8NA03 581 aa13.6□□□□□ -0.23
SEC23B-204ENST00000377475 ZSWIM6Q9HCJ5 1215 aa13.6□□□□□ -0.23
SEC23B-204ENST00000377475 SCAND2PQ9GZW5 306 aaPredicted RBP13.6□□□□□ -0.23
SEC23B-204ENST00000377475 KNDC1Q76NI1 1749 aa13.6□□□□□ -0.23
SEC23B-204ENST00000377475 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
SEC23B-204ENST00000377475 CCDC94Q9BW85 323 aaPredicted RBP13.6□□□□□ -0.23
SEC23B-204ENST00000377475 STK38Q15208 465 aa13.59□□□□□ -0.23
SEC23B-204ENST00000377475 AOPEPQ8N6M6 819 aa13.59□□□□□ -0.23
SEC23B-204ENST00000377475 TMEM2Q9UHN6 1383 aa13.59□□□□□ -0.23
SEC23B-204ENST00000377475 RNMTO43148 476 aaKnown RBP13.59□□□□□ -0.23
SEC23B-204ENST00000377475 GIGYF1O75420 1035 aaPredicted RBP13.59□□□□□ -0.23
SEC23B-204ENST00000377475 RPS6KB1P23443 525 aa13.59□□□□□ -0.23
SEC23B-204ENST00000377475 MARCKSP29966 332 aaPredicted RBP13.59□□□□□ -0.23
SEC23B-204ENST00000377475 ZNF710Q8N1W2 664 aa13.59□□□□□ -0.23
SEC23B-204ENST00000377475 TCHHQ07283 1943 aa13.59□□□□□ -0.23
SEC23B-204ENST00000377475 IFT172Q9UG01 1749 aa13.58□□□□□ -0.23
SEC23B-204ENST00000377475 POLA2Q14181 598 aa13.58□□□□□ -0.23
SEC23B-204ENST00000377475 TTC21AQ8NDW8 1320 aa13.58□□□□□ -0.23
SEC23B-204ENST00000377475 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
SEC23B-204ENST00000377475 DIP2CQ9Y2E4 1556 aa13.58□□□□□ -0.24
SEC23B-204ENST00000377475 HTATSF1O43719 755 aaKnown RBP13.58□□□□□ -0.24
SEC23B-204ENST00000377475 NECTIN1Q15223 517 aa13.58□□□□□ -0.24
SEC23B-204ENST00000377475 KIAA1524Q8TCG1 905 aa13.58□□□□□ -0.24
SEC23B-204ENST00000377475 GCP02774 474 aa13.58□□□□□ -0.24
SEC23B-204ENST00000377475 SKILP12757 684 aa13.58□□□□□ -0.24
SEC23B-204ENST00000377475 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
SEC23B-204ENST00000377475 THEMISQ8N1K5 641 aaPredicted RBP13.58□□□□□ -0.24
SEC23B-204ENST00000377475 LINS1Q8NG48 757 aa13.58□□□□□ -0.24
SEC23B-204ENST00000377475 CACTINQ8WUQ7 758 aaKnown RBP13.58□□□□□ -0.24
SEC23B-204ENST00000377475 ARHGAP31Q2M1Z3 1444 aa13.58□□□□□ -0.24
SEC23B-204ENST00000377475 CEP170BQ9Y4F5 1589 aaPredicted RBP13.57□□□□□ -0.24
SEC23B-204ENST00000377475 ARHGEF10O15013 1369 aa13.57□□□□□ -0.24
SEC23B-204ENST00000377475 TTC41PQ6P2S7 1318 aa13.57□□□□□ -0.24
SEC23B-204ENST00000377475 C11orf57Q6ZUT1 292 aaPredicted RBP13.57□□□□□ -0.24
SEC23B-204ENST00000377475 PRIMPOLQ96LW4 560 aa13.57□□□□□ -0.24
SEC23B-204ENST00000377475 ANKRD1Q15327 319 aa13.57□□□□□ -0.24
SEC23B-204ENST00000377475 PDILTQ8N807 584 aa13.57□□□□□ -0.24
SEC23B-204ENST00000377475 ZNF496Q96IT1 587 aaPredicted RBP13.57□□□□□ -0.24
SEC23B-204ENST00000377475 PGBD1Q96JS3 809 aa13.57□□□□□ -0.24
SEC23B-204ENST00000377475 DBNLQ9UJU6 430 aaKnown RBP13.57□□□□□ -0.24
SEC23B-204ENST00000377475 CCDC144BQ3MJ40 725 aa13.57□□□□□ -0.24
SEC23B-204ENST00000377475 PTPDC1A2A3K4 754 aa13.56□□□□□ -0.24
SEC23B-204ENST00000377475 USP27XA6NNY8 438 aa13.56□□□□□ -0.24
SEC23B-204ENST00000377475 LMOD1P29536 600 aaPredicted RBP13.56□□□□□ -0.24
SEC23B-204ENST00000377475 MTERF4Q7Z6M4 381 aaKnown RBP13.56□□□□□ -0.24
SEC23B-204ENST00000377475 CYP21A2P08686 494 aa13.56□□□□□ -0.24
SEC23B-204ENST00000377475 GOLGA8FQ08AF8 430 aa13.56□□□□□ -0.24
SEC23B-204ENST00000377475 GOLGA8DPQ0D2H9 430 aa13.56□□□□□ -0.24
SEC23B-204ENST00000377475 AKAP4Q5JQC9 854 aa13.56□□□□□ -0.24
SEC23B-204ENST00000377475 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
SEC23B-204ENST00000377475 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
SEC23B-204ENST00000377475 USP28Q96RU2 1077 aa13.56□□□□□ -0.24
SEC23B-204ENST00000377475 HDAC5Q9UQL6 1122 aa13.56□□□□□ -0.24
SEC23B-204ENST00000377475 TOB2Q14106 344 aaPredicted RBP13.55□□□□□ -0.24
SEC23B-204ENST00000377475 PTPN14Q15678 1187 aa13.55□□□□□ -0.24
SEC23B-204ENST00000377475 IP6K1Q92551 441 aa13.55□□□□□ -0.24
SEC23B-204ENST00000377475 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
SEC23B-204ENST00000377475 NEO1Q92859 1461 aa13.55□□□□□ -0.24
SEC23B-204ENST00000377475 HIP1O00291 1037 aa13.55□□□□□ -0.24
SEC23B-204ENST00000377475 ZNF75DP51815 510 aa13.55□□□□□ -0.24
SEC23B-204ENST00000377475 ZSCAN25Q6NSZ9 544 aa13.55□□□□□ -0.24
SEC23B-204ENST00000377475 SYNE3Q6ZMZ3 975 aa13.55□□□□□ -0.24
SEC23B-204ENST00000377475 TMC6Q7Z403 805 aa13.55□□□□□ -0.24
SEC23B-204ENST00000377475 RIMS1Q86UR5 1692 aaKnown RBP13.55□□□□□ -0.24
SEC23B-204ENST00000377475 CEP135Q66GS9 1140 aa13.55□□□□□ -0.24
SEC23B-204ENST00000377475 CGNQ9P2M7 1197 aaKnown RBP13.55□□□□□ -0.24
SEC23B-204ENST00000377475 ADCY9O60503 1353 aa13.55□□□□□ -0.24
SEC23B-204ENST00000377475 NPHP3Q7Z494 1330 aa13.54□□□□□ -0.24
SEC23B-204ENST00000377475 CCDC69A6NI79 296 aa13.54□□□□□ -0.24
SEC23B-204ENST00000377475 IGKV5-2P06315 115 aa13.54□□□□□ -0.24
SEC23B-204ENST00000377475 IFIT1P09914 478 aaKnown RBP13.54□□□□□ -0.24
SEC23B-204ENST00000377475 SCRN1Q12765 414 aa13.54□□□□□ -0.24
SEC23B-204ENST00000377475 SPECC1Q5M775 1068 aa13.54□□□□□ -0.24
SEC23B-204ENST00000377475 CFAP45Q9UL16 551 aa13.54□□□□□ -0.24
SEC23B-204ENST00000377475 USP32Q8NFA0 1604 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms