RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CCDC152Q4G0S7 254 aa7.52□□□□□ -1.2
UBR4-204ENST00000375254 CCDC12Q8WUD4 166 aaPredicted RBP7.52□□□□□ -1.2
UBR4-204ENST00000375254 CENPKQ9BS16 269 aa7.52□□□□□ -1.2
UBR4-204ENST00000375254 GOLGA8KD6RF30 607 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 CETN1Q12798 172 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 PRR16Q569H4 304 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 FERMT1Q9BQL6 677 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 RIOK3O14730 519 aaKnown RBP7.52□□□□□ -1.21
UBR4-204ENST00000375254 SLFNL1Q499Z3 407 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 TFIP11Q9UBB9 837 aaKnown RBP7.52□□□□□ -1.21
UBR4-204ENST00000375254 LARP1Q6PKG0 1096 aaKnown RBP7.52□□□□□ -1.21
UBR4-204ENST00000375254 KCNG4Q8TDN1 519 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 BLOC1S2Q6QNY1 142 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 LRRC27Q9C0I9 530 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 KLHL14Q9P2G3 628 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 STX6O43752 255 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 ARHGAP10A1A4S6 786 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 VPS52Q8N1B4 723 aa7.52□□□□□ -1.21
UBR4-204ENST00000375254 CHMP2AO43633 222 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 PKD2Q13563 968 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 NEK1Q96PY6 1258 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 POTEB3A0JP26 581 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 IGSF3O75054 1194 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 POTEBQ6S5H4 581 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 STAG1Q8WVM7 1258 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 PANK2Q9BZ23 570 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 RMND1Q9NWS8 449 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 NOP14P78316 857 aaKnown RBP7.51□□□□□ -1.21
UBR4-204ENST00000375254 OSBPL9Q96SU4 736 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 EVCP57679 992 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 TMC6Q7Z403 805 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 TTF2Q9UNY4 1162 aaKnown RBP7.51□□□□□ -1.21
UBR4-204ENST00000375254 SOGA3Q5TF21 947 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 ATF7IPQ6VMQ6 1270 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 HNRNPH2P55795 449 aaKnown RBP7.51□□□□□ -1.21
UBR4-204ENST00000375254 MAML3Q96JK9 1138 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 MTRF1LQ9UGC7 380 aaKnown RBP7.51□□□□□ -1.21
UBR4-204ENST00000375254 BAIAP2L1Q9UHR4 511 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 RIPK4P57078 832 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 MAN1A2O60476 641 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 MUM1Q2TAK8 710 aa7.51□□□□□ -1.21
UBR4-204ENST00000375254 RRP15Q9Y3B9 282 aaKnown RBP7.51□□□□□ -1.21
UBR4-204ENST00000375254 CRYMQ14894 314 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 ACTN4O43707 911 aaKnown RBP7.5□□□□□ -1.21
UBR4-204ENST00000375254 NUF2Q9BZD4 464 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 CAPS2Q9BXY5 557 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 IRAK4Q9NWZ3 460 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 TNNC1P63316 161 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 ALS2CLQ60I27 953 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 SPAG5Q96R06 1193 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 TCEAL9Q9UHQ7 104 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 ATP5HO75947 161 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 SDCCAG8Q86SQ7 713 aaPredicted RBP7.5□□□□□ -1.21
UBR4-204ENST00000375254 HVCN1Q96D96 273 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 GOLGA3Q08378 1498 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 LCA5Q86VQ0 697 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 RAB3GAP2Q9H2M9 1393 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 ZRANB2O95218 330 aaKnown RBP eCLIP7.5□□□□□ -1.212e-7■■■□□ 18.2
UBR4-204ENST00000375254 MTMR3Q13615 1198 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 EID1Q9Y6B2 187 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 TRIM14Q14142 442 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 USP48Q86UV5 1035 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 NACAP1Q9BZK3 213 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 PPP1R14CQ8TAE6 165 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 IFT81Q8WYA0 676 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 BCL2L12Q9HB09 334 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 TANGO6Q9C0B7 1094 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.5□□□□□ -1.21
UBR4-204ENST00000375254 GRAMD4Q6IC98 578 aa7.5□□□□□ -1.21
UBR4-204ENST00000375254 AMOTQ4VCS5 1084 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 NRBF2Q96F24 287 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 TBC1D2BQ9UPU7 963 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 GUCY2CP25092 1073 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 VPS53Q5VIR6 699 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 DRP2Q13474 957 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 NBPF20Q3BBV1 942 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 N4BP2L2Q92802 583 aaPredicted RBP7.49□□□□□ -1.21
UBR4-204ENST00000375254 GSDMBQ8TAX9 411 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 GTF3C6Q969F1 213 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 ATP2A3Q93084 1043 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 ADAMTS8Q9UP79 889 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 ATP2B1P20020 1258 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 ANKRD27Q96NW4 1050 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 MORC2Q9Y6X9 1032 aaPredicted RBP7.49□□□□□ -1.21
UBR4-204ENST00000375254 CCDC69A6NI79 296 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 RASSF10A6NK89 507 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 TMEM232C9JQI7 657 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 EIF3DO15371 548 aaKnown RBP eCLIP7.49□□□□□ -1.213e-7■■□□□ 12.2
UBR4-204ENST00000375254 UTP6Q9NYH9 597 aaKnown RBP7.49□□□□□ -1.21
UBR4-204ENST00000375254 FYB2Q5VWT5 728 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 INTS8Q75QN2 995 aaKnown RBP7.49□□□□□ -1.21
UBR4-204ENST00000375254 CCDC178Q5BJE1 867 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 LGSNQ5TDP6 509 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 PIP4K2CQ8TBX8 421 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 UBA5Q9GZZ9 404 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 SLC8A3P57103 927 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 STAMBPL1Q96FJ0 436 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 BAG1Q99933 345 aaPredicted RBP7.49□□□□□ -1.21
UBR4-204ENST00000375254 TMX1Q9H3N1 280 aa7.49□□□□□ -1.21
UBR4-204ENST00000375254 CEBPZQ03701 1054 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms